RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 SPECC1Q5M775 1068 aa11.31□□□□□ -0.6
MSL3-202ENST00000337339 TBC1D10CQ8IV04 446 aa11.31□□□□□ -0.6
MSL3-202ENST00000337339 AOPEPQ8N6M6 819 aa11.31□□□□□ -0.6
MSL3-202ENST00000337339 GOLGA8AA7E2F4 631 aa11.31□□□□□ -0.6
MSL3-202ENST00000337339 NDUFA8P51970 172 aa11.31□□□□□ -0.6
MSL3-202ENST00000337339 TTF1Q15361 905 aaPredicted RBP11.31□□□□□ -0.6
MSL3-202ENST00000337339 MRPS27Q92552 414 aaKnown RBP11.31□□□□□ -0.6
MSL3-202ENST00000337339 MTMR7Q9Y216 660 aa11.31□□□□□ -0.6
MSL3-202ENST00000337339 SLC12A7Q9Y666 1083 aa11.31□□□□□ -0.6
MSL3-202ENST00000337339 C5P01031 1676 aa11.3□□□□□ -0.6
MSL3-202ENST00000337339 SPTLC2O15270 562 aa11.3□□□□□ -0.6
MSL3-202ENST00000337339 CSF1RP07333 972 aa11.3□□□□□ -0.6
MSL3-202ENST00000337339 ADD2P35612 726 aa11.3□□□□□ -0.6
MSL3-202ENST00000337339 IARSP41252 1262 aaKnown RBP11.3□□□□□ -0.6
MSL3-202ENST00000337339 GLIPR1L2Q4G1C9 344 aa11.3□□□□□ -0.6
MSL3-202ENST00000337339 CYB5R4Q7L1T6 521 aa11.3□□□□□ -0.6
MSL3-202ENST00000337339 SPATA5Q8NB90 893 aa11.3□□□□□ -0.6
MSL3-202ENST00000337339 TRMT1Q9NXH9 659 aaKnown RBP11.3□□□□□ -0.6
MSL3-202ENST00000337339 ANGEL1Q9UNK9 670 aaKnown RBP11.3□□□□□ -0.6
MSL3-202ENST00000337339 SLC4A4Q9Y6R1 1079 aa11.3□□□□□ -0.6
MSL3-202ENST00000337339 ZBTB43O43298 467 aa11.3□□□□□ -0.6
MSL3-202ENST00000337339 ANTXR2P58335 489 aa11.3□□□□□ -0.6
MSL3-202ENST00000337339 ARID5BQ14865 1188 aa11.3□□□□□ -0.6
MSL3-202ENST00000337339 PUM3Q15397 648 aaKnown RBP11.3□□□□□ -0.6
MSL3-202ENST00000337339 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
MSL3-202ENST00000337339 NKX2-3Q8TAU0 364 aa11.3□□□□□ -0.6
MSL3-202ENST00000337339 RCOR1Q9UKL0 485 aa11.3□□□□□ -0.6
MSL3-202ENST00000337339 FAM160A1Q05DH4 1040 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 TRIM28Q13263 835 aaKnown RBP11.29□□□□□ -0.6
MSL3-202ENST00000337339 TPD52L1Q16890 204 aaPredicted RBP11.29□□□□□ -0.6
MSL3-202ENST00000337339 CEP57L1Q8IYX8 460 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 FBXO18Q8NFZ0 1043 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 LPIN2Q92539 896 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 UTP14AQ9BVJ6 771 aaKnown RBP11.29□□□□□ -0.6
MSL3-202ENST00000337339 KCNF1Q9H3M0 494 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 hCG_1642624A0A1W2PR95 340 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 ERICH2A1L162 156 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 RRP9O43818 475 aaKnown RBP11.29□□□□□ -0.6
MSL3-202ENST00000337339 RASGRF1Q13972 1273 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 STX1AQ16623 288 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 ADAMTSL3P82987 1691 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 UBN2Q6ZU65 1347 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 WTIPA6NIX2 430 aaPredicted RBP11.29□□□□□ -0.6
MSL3-202ENST00000337339 FOXP2O15409 715 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 PRDM1O75626 825 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 ZNF75DP51815 510 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 MFSD6Q6ZSS7 791 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 MB21D2Q8IYB1 491 aaPredicted RBP11.29□□□□□ -0.6
MSL3-202ENST00000337339 SDR42E1Q8WUS8 393 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 ANO10Q9NW15 660 aa11.29□□□□□ -0.6
MSL3-202ENST00000337339 KIF28PB7ZC32 967 aa11.28□□□□□ -0.6
MSL3-202ENST00000337339 CRKLP46109 303 aaKnown RBP11.28□□□□□ -0.6
MSL3-202ENST00000337339 MYSM1Q5VVJ2 828 aa11.28□□□□□ -0.6
MSL3-202ENST00000337339 TRPM3Q9HCF6 1732 aaPredicted RBP11.28□□□□□ -0.6
MSL3-202ENST00000337339 KCNQ2O43526 872 aa11.28□□□□□ -0.6
MSL3-202ENST00000337339 SLC3A2P08195 630 aaKnown RBP11.28□□□□□ -0.6
MSL3-202ENST00000337339 UQCRFS1P1P0C7P4 283 aa11.28□□□□□ -0.6
MSL3-202ENST00000337339 CYP7A1P22680 504 aa11.28□□□□□ -0.6
MSL3-202ENST00000337339 GYG1P46976 350 aa11.28□□□□□ -0.6
MSL3-202ENST00000337339 PDILTQ8N807 584 aa11.28□□□□□ -0.6
MSL3-202ENST00000337339 NACAP1Q9BZK3 213 aa11.28□□□□□ -0.6
MSL3-202ENST00000337339 PTPN21Q16825 1174 aa11.28□□□□□ -0.6
MSL3-202ENST00000337339 FAM182BQ5T319 152 aa11.28□□□□□ -0.6
MSL3-202ENST00000337339 ILDR1Q86SU0 546 aaPredicted RBP11.28□□□□□ -0.6
MSL3-202ENST00000337339 IFNL3Q8IZI9 196 aa11.28□□□□□ -0.6
MSL3-202ENST00000337339 NAT10Q9H0A0 1025 aaKnown RBP11.28□□□□□ -0.6
MSL3-202ENST00000337339 ZSWIM5Q9P217 1185 aa11.28□□□□□ -0.6
MSL3-202ENST00000337339 KCNJ14Q9UNX9 436 aa11.28□□□□□ -0.6
MSL3-202ENST00000337339 HPS5Q9UPZ3 1129 aa11.28□□□□□ -0.6
MSL3-202ENST00000337339 DCCP43146 1447 aa11.27□□□□□ -0.6
MSL3-202ENST00000337339 CDC27P30260 824 aa11.27□□□□□ -0.6
MSL3-202ENST00000337339 KRT40Q6A162 431 aa11.27□□□□□ -0.6
MSL3-202ENST00000337339 CLIC6Q96NY7 704 aa11.27□□□□□ -0.6
MSL3-202ENST00000337339 RFX7Q2KHR2 1363 aa11.27□□□□□ -0.61
MSL3-202ENST00000337339 KIF1AQ12756 1690 aa11.27□□□□□ -0.61
MSL3-202ENST00000337339 USP54Q70EL1 1684 aa11.27□□□□□ -0.61
MSL3-202ENST00000337339 LOC102724428A0A0B4J2F2 783 aa11.27□□□□□ -0.61
MSL3-202ENST00000337339 RANBP6O60518 1105 aaKnown RBP11.27□□□□□ -0.61
MSL3-202ENST00000337339 LMOD1P29536 600 aaPredicted RBP11.27□□□□□ -0.61
MSL3-202ENST00000337339 SIK1P57059 783 aa11.27□□□□□ -0.61
MSL3-202ENST00000337339 CCDC152Q4G0S7 254 aa11.27□□□□□ -0.61
MSL3-202ENST00000337339 ANO1Q5XXA6 986 aa11.27□□□□□ -0.61
MSL3-202ENST00000337339 CCDC87Q9NVE4 849 aa11.27□□□□□ -0.61
MSL3-202ENST00000337339 NEDD4P46934 1319 aa11.27□□□□□ -0.61
MSL3-202ENST00000337339 CTAGE5O15320 804 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 IL6STP40189 918 aaPredicted RBP11.26□□□□□ -0.61
MSL3-202ENST00000337339 SART3Q15020 963 aaKnown RBP11.26□□□□□ -0.61
MSL3-202ENST00000337339 APOA5Q6Q788 366 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 LCORLQ8N3X6 602 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 LINC00301Q8NCQ3 95 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 KCNG4Q8TDN1 519 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 UBAC1Q9BSL1 405 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 TUBGCP6Q96RT7 1819 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 JCADQ9P266 1359 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 CDKL5O76039 1030 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 ZNF202O95125 648 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 TPM3P06753 285 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 AKAP17AQ02040 695 aaKnown RBP11.26□□□□□ -0.61
MSL3-202ENST00000337339 SAFBQ15424 915 aaKnown RBP eCLIP11.26□□□□□ -0.61
MSL3-202ENST00000337339 DPCR1Q3MIW9 517 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms