RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 BECN2A8MW95 431 aa17.33■□□□□ 0.36
UBA1-201ENST00000335972 SUSD4Q5VX71 490 aa17.33■□□□□ 0.36
UBA1-201ENST00000335972 MIGA1Q8NAN2 632 aa17.33■□□□□ 0.36
UBA1-201ENST00000335972 C16orf45Q96MC5 204 aaPredicted RBP17.33■□□□□ 0.36
UBA1-201ENST00000335972 TEX13AQ9BXU3 409 aaPredicted RBP17.33■□□□□ 0.36
UBA1-201ENST00000335972 UBR2Q8IWV8 1755 aa17.32■□□□□ 0.36
UBA1-201ENST00000335972 GOLGA6L6A8MZA4 724 aa17.32■□□□□ 0.36
UBA1-201ENST00000335972 SMIM22K7EJ46 135 aa17.32■□□□□ 0.36
UBA1-201ENST00000335972 LRRFIP1Q32MZ4 808 aaKnown RBP17.32■□□□□ 0.36
UBA1-201ENST00000335972 AIDAQ96BJ3 306 aa17.32■□□□□ 0.36
UBA1-201ENST00000335972 NEDD4P46934 1319 aa17.32■□□□□ 0.36
UBA1-201ENST00000335972 CDC27P30260 824 aa17.32■□□□□ 0.36
UBA1-201ENST00000335972 AOPEPQ8N6M6 819 aa17.32■□□□□ 0.36
UBA1-201ENST00000335972 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.32■□□□□ 0.36
UBA1-201ENST00000335972 ABCC6O95255 1503 aa17.32■□□□□ 0.36
UBA1-201ENST00000335972 BCAMP50895 628 aa17.32■□□□□ 0.36
UBA1-201ENST00000335972 VGLL2Q8N8G2 317 aa17.32■□□□□ 0.36
UBA1-201ENST00000335972 MBD4O95243 580 aa17.31■□□□□ 0.36
UBA1-201ENST00000335972 FAM160A1Q05DH4 1040 aa17.31■□□□□ 0.36
UBA1-201ENST00000335972 FBXO18Q8NFZ0 1043 aa17.31■□□□□ 0.36
UBA1-201ENST00000335972 TDRD7Q8NHU6 1098 aaKnown RBP17.31■□□□□ 0.36
UBA1-201ENST00000335972 CACTINQ8WUQ7 758 aaKnown RBP17.31■□□□□ 0.36
UBA1-201ENST00000335972 PLA2G12BQ9BX93 195 aa17.31■□□□□ 0.36
UBA1-201ENST00000335972 NWD2Q9ULI1 1742 aa17.31■□□□□ 0.36
UBA1-201ENST00000335972 IQCB1Q15051 598 aa17.31■□□□□ 0.36
UBA1-201ENST00000335972 ENGASEQ8NFI3 743 aa17.31■□□□□ 0.36
UBA1-201ENST00000335972 PDE8AO60658 829 aa17.3■□□□□ 0.36
UBA1-201ENST00000335972 TACC3Q9Y6A5 838 aa17.3■□□□□ 0.36
UBA1-201ENST00000335972 MYO5AQ9Y4I1 1855 aaKnown RBP17.3■□□□□ 0.36
UBA1-201ENST00000335972 METAP2P50579 478 aaKnown RBP eCLIP17.3■□□□□ 0.364e-6■■□□□ 13.9
UBA1-201ENST00000335972 RASGRF1Q13972 1273 aa17.3■□□□□ 0.36
UBA1-201ENST00000335972 LINC00301Q8NCQ3 95 aa17.3■□□□□ 0.36
UBA1-201ENST00000335972 MRPS27Q92552 414 aaKnown RBP17.3■□□□□ 0.36
UBA1-201ENST00000335972 SHANK3Q9BYB0 1731 aa17.3■□□□□ 0.36
UBA1-201ENST00000335972 PTPN21Q16825 1174 aa17.3■□□□□ 0.36
UBA1-201ENST00000335972 MYSM1Q5VVJ2 828 aa17.3■□□□□ 0.36
UBA1-201ENST00000335972 SYNE3Q6ZMZ3 975 aa17.3■□□□□ 0.36
UBA1-201ENST00000335972 MPHOSPH8Q99549 860 aa17.3■□□□□ 0.36
UBA1-201ENST00000335972 ALG1Q9BT22 464 aa17.3■□□□□ 0.36
UBA1-201ENST00000335972 GNL2Q13823 731 aaKnown RBP17.29■□□□□ 0.36
UBA1-201ENST00000335972 STX1AQ16623 288 aa17.29■□□□□ 0.36
UBA1-201ENST00000335972 ZSCAN25Q6NSZ9 544 aa17.29■□□□□ 0.36
UBA1-201ENST00000335972 PLA2G4DQ86XP0 818 aa17.29■□□□□ 0.36
UBA1-201ENST00000335972 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
UBA1-201ENST00000335972 SPECC1Q5M775 1068 aa17.29■□□□□ 0.36
UBA1-201ENST00000335972 SPTLC2O15270 562 aa17.29■□□□□ 0.36
UBA1-201ENST00000335972 DPCR1Q3MIW9 517 aa17.29■□□□□ 0.36
UBA1-201ENST00000335972 EPB41L4AQ9HCS5 686 aaPredicted RBP17.29■□□□□ 0.36
UBA1-201ENST00000335972 ATP2B1P20020 1258 aa17.28■□□□□ 0.36
UBA1-201ENST00000335972 ATP6V1AP38606 617 aa17.28■□□□□ 0.36
UBA1-201ENST00000335972 SPATA5Q8NB90 893 aa17.28■□□□□ 0.36
UBA1-201ENST00000335972 ZNF592Q92610 1267 aa17.28■□□□□ 0.36
UBA1-201ENST00000335972 CLIC6Q96NY7 704 aa17.28■□□□□ 0.36
UBA1-201ENST00000335972 SPTLC3Q9NUV7 552 aa17.28■□□□□ 0.36
UBA1-201ENST00000335972 ANGEL1Q9UNK9 670 aaKnown RBP17.28■□□□□ 0.36
UBA1-201ENST00000335972 NUTM2BA6NNL0 878 aaPredicted RBP17.28■□□□□ 0.36
UBA1-201ENST00000335972 NUTM2EB1AL46 878 aaPredicted RBP17.28■□□□□ 0.36
UBA1-201ENST00000335972 NUTM2AQ8IVF1 878 aaPredicted RBP17.28■□□□□ 0.36
UBA1-201ENST00000335972 FMR1NBQ8N0W7 255 aaPredicted RBP17.28■□□□□ 0.36
UBA1-201ENST00000335972 WDHD1O75717 1129 aaPredicted RBP17.28■□□□□ 0.36
UBA1-201ENST00000335972 KIF23Q02241 960 aaPredicted RBP17.28■□□□□ 0.36
UBA1-201ENST00000335972 TMEM67Q5HYA8 995 aa17.28■□□□□ 0.36
UBA1-201ENST00000335972 DHX40Q8IX18 779 aaKnown RBP17.28■□□□□ 0.36
UBA1-201ENST00000335972 MYRIPQ8NFW9 859 aa17.28■□□□□ 0.36
UBA1-201ENST00000335972 STRBPQ96SI9 672 aaKnown RBP17.28■□□□□ 0.36
UBA1-201ENST00000335972 RTEL1Q9NZ71 1219 aa17.28■□□□□ 0.36
UBA1-201ENST00000335972 BICDL1Q6ZP65 573 aa17.27■□□□□ 0.36
UBA1-201ENST00000335972 CCDC24Q8N4L8 307 aa17.27■□□□□ 0.36
UBA1-201ENST00000335972 CDHR2Q9BYE9 1310 aa17.27■□□□□ 0.36
UBA1-201ENST00000335972 RIOK3O14730 519 aaKnown RBP17.27■□□□□ 0.35
UBA1-201ENST00000335972 TERF1P54274 439 aa17.27■□□□□ 0.35
UBA1-201ENST00000335972 PUM3Q15397 648 aaKnown RBP17.27■□□□□ 0.35
UBA1-201ENST00000335972 SLC26A6Q9BXS9 759 aa17.27■□□□□ 0.35
UBA1-201ENST00000335972 NAPBQ9H115 298 aa17.27■□□□□ 0.35
UBA1-201ENST00000335972 ABCF2Q9UG63 623 aa17.27■□□□□ 0.35
UBA1-201ENST00000335972 DHX16O60231 1041 aaKnown RBP17.27■□□□□ 0.35
UBA1-201ENST00000335972 KRT40Q6A162 431 aa17.27■□□□□ 0.35
UBA1-201ENST00000335972 APOA5Q6Q788 366 aa17.27■□□□□ 0.35
UBA1-201ENST00000335972 CHMP4CQ96CF2 233 aa17.27■□□□□ 0.35
UBA1-201ENST00000335972 TRMT1Q9NXH9 659 aaKnown RBP17.27■□□□□ 0.35
UBA1-201ENST00000335972 SH2B2O14492 632 aaPredicted RBP17.26■□□□□ 0.35
UBA1-201ENST00000335972 IFIT3O14879 490 aaKnown RBP17.26■□□□□ 0.35
UBA1-201ENST00000335972 LCORLQ8N3X6 602 aa17.26■□□□□ 0.35
UBA1-201ENST00000335972 ZSWIM5Q9P217 1185 aa17.26■□□□□ 0.35
UBA1-201ENST00000335972 FBXO3Q9UK99 471 aa17.26■□□□□ 0.35
UBA1-201ENST00000335972 BCL9O00512 1426 aa17.26■□□□□ 0.35
UBA1-201ENST00000335972 MROH7-TTC4A0A0A0MT08 1334 aa17.26■□□□□ 0.35
UBA1-201ENST00000335972 GOLGA8AA7E2F4 631 aa17.26■□□□□ 0.35
UBA1-201ENST00000335972 DYNC1I1O14576 645 aa17.26■□□□□ 0.35
UBA1-201ENST00000335972 GUCY1A2P33402 732 aa17.26■□□□□ 0.35
UBA1-201ENST00000335972 EVCP57679 992 aa17.26■□□□□ 0.35
UBA1-201ENST00000335972 ANO1Q5XXA6 986 aa17.26■□□□□ 0.35
UBA1-201ENST00000335972 USP27XA6NNY8 438 aa17.25■□□□□ 0.35
UBA1-201ENST00000335972 RANBP6O60518 1105 aaKnown RBP17.25■□□□□ 0.35
UBA1-201ENST00000335972 HSP90AA4PQ58FG1 418 aa17.25■□□□□ 0.35
UBA1-201ENST00000335972 ADALQ6DHV7 355 aa17.25■□□□□ 0.35
UBA1-201ENST00000335972 VPS37DQ86XT2 251 aa17.25■□□□□ 0.35
UBA1-201ENST00000335972 IFNL3Q8IZI9 196 aa17.25■□□□□ 0.35
UBA1-201ENST00000335972 NIP7Q9Y221 180 aaKnown RBP eCLIP17.25■□□□□ 0.35
UBA1-201ENST00000335972 TCRBV5S4A2TA0A5A2 114 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms