RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 LMNB1P20700 586 aa25.96■■□□□ 1.75
TPM1-204ENST00000334895 MECOMQ03112 1051 aa25.96■■□□□ 1.75
TPM1-204ENST00000334895 UBE3CQ15386 1083 aa25.96■■□□□ 1.75
TPM1-204ENST00000334895 C9orf131Q5VYM1 1079 aa25.96■■□□□ 1.75
TPM1-204ENST00000334895 ZSCAN25Q6NSZ9 544 aa25.96■■□□□ 1.75
TPM1-204ENST00000334895 JDP2Q8WYK2 163 aa25.96■■□□□ 1.75
TPM1-204ENST00000334895 NSUN4Q96CB9 384 aaKnown RBP25.96■■□□□ 1.75
TPM1-204ENST00000334895 RNF181Q9P0P0 153 aa25.96■■□□□ 1.75
TPM1-204ENST00000334895 LDHBP07195 334 aaKnown RBP25.96■■□□□ 1.75
TPM1-204ENST00000334895 LRRFIP1Q32MZ4 808 aaKnown RBP25.96■■□□□ 1.75
TPM1-204ENST00000334895 SPTY2D1Q68D10 685 aaPredicted RBP25.96■■□□□ 1.75
TPM1-204ENST00000334895 OSBP2Q969R2 916 aa25.96■■□□□ 1.75
TPM1-204ENST00000334895 SGSM2O43147 1006 aa25.95■■□□□ 1.74
TPM1-204ENST00000334895 RAD17O75943 681 aa25.95■■□□□ 1.74
TPM1-204ENST00000334895 ADGRA1Q86SQ6 560 aa25.95■■□□□ 1.74
TPM1-204ENST00000334895 APPBP2Q92624 585 aa25.95■■□□□ 1.74
TPM1-204ENST00000334895 FKBP1AP62942 108 aaKnown RBP25.94■■□□□ 1.74
TPM1-204ENST00000334895 MAST3O60307 1309 aa25.93■■□□□ 1.74
TPM1-204ENST00000334895 M0R2C6 588 aa25.93■■□□□ 1.74
TPM1-204ENST00000334895 PSMD14O00487 310 aa25.93■■□□□ 1.74
TPM1-204ENST00000334895 CXCL9Q07325 125 aa25.93■■□□□ 1.74
TPM1-204ENST00000334895 ZNF589Q86UQ0 364 aaPredicted RBP25.93■■□□□ 1.74
TPM1-204ENST00000334895 PUS7LQ9H0K6 701 aaKnown RBP25.93■■□□□ 1.74
TPM1-204ENST00000334895 HELLSQ9NRZ9 838 aa25.92■■□□□ 1.74
TPM1-204ENST00000334895 SUGT1Q9Y2Z0 365 aa25.92■■□□□ 1.74
TPM1-204ENST00000334895 RAD50Q92878 1312 aa25.92■■□□□ 1.74
TPM1-204ENST00000334895 FZD9O00144 591 aa25.92■■□□□ 1.74
TPM1-204ENST00000334895 IGSF3O75054 1194 aa25.92■■□□□ 1.74
TPM1-204ENST00000334895 VIL1P09327 827 aaKnown RBP25.92■■□□□ 1.74
TPM1-204ENST00000334895 NAA16Q6N069 864 aaPredicted RBP25.92■■□□□ 1.74
TPM1-204ENST00000334895 CCDC129Q6ZRS4 1044 aa25.92■■□□□ 1.74
TPM1-204ENST00000334895 DZIP1Q86YF9 867 aaKnown RBP25.92■■□□□ 1.74
TPM1-204ENST00000334895 RUFY2Q8WXA3 655 aa25.92■■□□□ 1.74
TPM1-204ENST00000334895 CYP7A1P22680 504 aa25.91■■□□□ 1.74
TPM1-204ENST00000334895 DIXDC1Q155Q3 683 aa25.91■■□□□ 1.74
TPM1-204ENST00000334895 MCMDC2Q4G0Z9 681 aa25.91■■□□□ 1.74
TPM1-204ENST00000334895 MYH2Q9UKX2 1941 aa25.91■■□□□ 1.74
TPM1-204ENST00000334895 RSBN1LQ6PCB5 846 aaPredicted RBP25.9■■□□□ 1.74
TPM1-204ENST00000334895 ADAMTSL1Q8N6G6 1762 aa25.9■■□□□ 1.74
TPM1-204ENST00000334895 F8W031 263 aaPredicted RBP25.89■■□□□ 1.74
TPM1-204ENST00000334895 YY1P25490 414 aa25.89■■□□□ 1.74
TPM1-204ENST00000334895 MFAP1P55081 439 aaKnown RBP25.89■■□□□ 1.74
TPM1-204ENST00000334895 CIAPIN1Q6FI81 312 aa25.88■■□□□ 1.73
TPM1-204ENST00000334895 GMLQ99445 158 aa25.88■■□□□ 1.73
TPM1-204ENST00000334895 TTF2Q9UNY4 1162 aaKnown RBP25.88■■□□□ 1.73
TPM1-204ENST00000334895 ZNF541Q9H0D2 1346 aa25.88■■□□□ 1.73
TPM1-204ENST00000334895 TMED8Q6PL24 325 aaPredicted RBP25.88■■□□□ 1.73
TPM1-204ENST00000334895 KIAA0825Q8IV33 1275 aa25.88■■□□□ 1.73
TPM1-204ENST00000334895 MIGA1Q8NAN2 632 aa25.88■■□□□ 1.73
TPM1-204ENST00000334895 CCDC171Q6TFL3 1326 aa25.87■■□□□ 1.73
TPM1-204ENST00000334895 ZBTB12Q9Y330 459 aaPredicted RBP25.87■■□□□ 1.73
TPM1-204ENST00000334895 GPAA1O43292 621 aa25.86■■□□□ 1.73
TPM1-204ENST00000334895 RIOK1Q9BRS2 568 aaKnown RBP25.86■■□□□ 1.73
TPM1-204ENST00000334895 LSG1Q9H089 658 aaKnown RBP25.86■■□□□ 1.73
TPM1-204ENST00000334895 MROH7-TTC4A0A0A0MT08 1334 aa25.86■■□□□ 1.73
TPM1-204ENST00000334895 MYO3BQ8WXR4 1341 aa25.86■■□□□ 1.73
TPM1-204ENST00000334895 MBD4O95243 580 aa25.85■■□□□ 1.73
TPM1-204ENST00000334895 GSTO1P78417 241 aa25.85■■□□□ 1.73
TPM1-204ENST00000334895 GAKO14976 1311 aa25.85■■□□□ 1.73
TPM1-204ENST00000334895 SCNN1DP51172 638 aa25.85■■□□□ 1.73
TPM1-204ENST00000334895 EIF6P56537 245 aaKnown RBP25.85■■□□□ 1.73
TPM1-204ENST00000334895 PTH1RQ03431 593 aa25.85■■□□□ 1.73
TPM1-204ENST00000334895 LCORLQ8N3X6 602 aa25.85■■□□□ 1.73
TPM1-204ENST00000334895 FAM163AQ96GL9 167 aaPredicted RBP25.85■■□□□ 1.73
TPM1-204ENST00000334895 ANO2Q9NQ90 1003 aa25.85■■□□□ 1.73
TPM1-204ENST00000334895 FOXP2O15409 715 aa25.84■■□□□ 1.73
TPM1-204ENST00000334895 REC8O95072 547 aa25.84■■□□□ 1.73
TPM1-204ENST00000334895 DYNLL1P63167 89 aaKnown RBP25.84■■□□□ 1.73
TPM1-204ENST00000334895 TNIP1Q15025 636 aa25.84■■□□□ 1.73
TPM1-204ENST00000334895 VPS53Q5VIR6 699 aa25.84■■□□□ 1.73
TPM1-204ENST00000334895 STRBPQ96SI9 672 aaKnown RBP25.84■■□□□ 1.73
TPM1-204ENST00000334895 ARMT1Q9H993 441 aa25.84■■□□□ 1.73
TPM1-204ENST00000334895 DAGLAQ9Y4D2 1042 aa25.84■■□□□ 1.73
TPM1-204ENST00000334895 AGBL3Q8NEM8 1001 aa25.83■■□□□ 1.73
TPM1-204ENST00000334895 AIDAQ96BJ3 306 aa25.83■■□□□ 1.73
TPM1-204ENST00000334895 MAGEB6P1A0A0J9YX57 407 aa25.82■■□□□ 1.72
TPM1-204ENST00000334895 LDHCP07864 332 aa25.82■■□□□ 1.72
TPM1-204ENST00000334895 USP26Q9BXU7 913 aa25.82■■□□□ 1.72
TPM1-204ENST00000334895 AATFQ9NY61 560 aaKnown RBP eCLIP25.82■■□□□ 1.72
TPM1-204ENST00000334895 GPR75-ASB3A0A0A6YYF3 556 aa25.81■■□□□ 1.72
TPM1-204ENST00000334895 ZC3H4Q9UPT8 1303 aaKnown RBP25.81■■□□□ 1.72
TPM1-204ENST00000334895 CRKP46108 304 aa25.81■■□□□ 1.72
TPM1-204ENST00000334895 HDLBPQ00341 1268 aaKnown RBP25.81■■□□□ 1.72
TPM1-204ENST00000334895 HHIPL2Q6UWX4 724 aa25.81■■□□□ 1.72
TPM1-204ENST00000334895 SLF2Q8IX21 1173 aa25.81■■□□□ 1.72
TPM1-204ENST00000334895 MRIQ9BWK5 157 aa25.81■■□□□ 1.72
TPM1-204ENST00000334895 PCDHAC2Q9Y5I4 1007 aa25.81■■□□□ 1.72
TPM1-204ENST00000334895 HSPD1P10809 573 aaKnown RBP25.8■■□□□ 1.72
TPM1-204ENST00000334895 PPP4CP60510 307 aa25.8■■□□□ 1.72
TPM1-204ENST00000334895 TEKT1Q969V4 418 aa25.8■■□□□ 1.72
TPM1-204ENST00000334895 GJA3Q9Y6H8 435 aa25.8■■□□□ 1.72
TPM1-204ENST00000334895 EIF5BO60841 1220 aaKnown RBP25.79■■□□□ 1.72
TPM1-204ENST00000334895 BTDP43251 543 aa25.79■■□□□ 1.72
TPM1-204ENST00000334895 KIAA1211Q6ZU35 1233 aa25.79■■□□□ 1.72
TPM1-204ENST00000334895 SERPINA10Q9UK55 444 aa25.79■■□□□ 1.72
TPM1-204ENST00000334895 SHTN1A0MZ66 631 aa25.78■■□□□ 1.72
TPM1-204ENST00000334895 PRKAB2O43741 272 aa25.78■■□□□ 1.72
TPM1-204ENST00000334895 RPS12P25398 132 aaKnown RBP25.78■■□□□ 1.72
TPM1-204ENST00000334895 GMPSP49915 693 aaPredicted RBP25.78■■□□□ 1.72
TPM1-204ENST00000334895 APOBEC3HQ6NTF7 200 aaKnown RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms