RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 EPHA10Q5JZY3 1008 aa15.84■□□□□ 0.13
SYNE3-201ENST00000334258 EP400NLQ6ZTU2 488 aa15.84■□□□□ 0.13
SYNE3-201ENST00000334258 SMARCE1Q969G3 411 aa15.84■□□□□ 0.13
SYNE3-201ENST00000334258 TSPYL1Q9H0U9 437 aa15.84■□□□□ 0.13
SYNE3-201ENST00000334258 CEMIPQ8WUJ3 1361 aa15.84■□□□□ 0.13
SYNE3-201ENST00000334258 A0A1W2PQ27 194 aa15.84■□□□□ 0.13
SYNE3-201ENST00000334258 A0A1W2PQ64 194 aa15.84■□□□□ 0.13
SYNE3-201ENST00000334258 A0A1W2PQD8 194 aa15.84■□□□□ 0.13
SYNE3-201ENST00000334258 GOLIM4O00461 696 aa15.84■□□□□ 0.13
SYNE3-201ENST00000334258 CPLX1O14810 134 aa15.84■□□□□ 0.13
SYNE3-201ENST00000334258 CASQ1P31415 396 aa15.84■□□□□ 0.13
SYNE3-201ENST00000334258 ZNF496Q96IT1 587 aaPredicted RBP15.84■□□□□ 0.13
SYNE3-201ENST00000334258 MYD88Q99836 296 aa15.84■□□□□ 0.13
SYNE3-201ENST00000334258 ARFGAP3Q9NP61 516 aa15.84■□□□□ 0.13
SYNE3-201ENST00000334258 LMTK3Q96Q04 1460 aa15.83■□□□□ 0.13
SYNE3-201ENST00000334258 TULP2O00295 520 aa15.83■□□□□ 0.13
SYNE3-201ENST00000334258 AMOTQ4VCS5 1084 aa15.83■□□□□ 0.13
SYNE3-201ENST00000334258 CBFA2T2O43439 604 aa15.83■□□□□ 0.12
SYNE3-201ENST00000334258 ZSWIM4Q9H7M6 989 aa15.83■□□□□ 0.12
SYNE3-201ENST00000334258 RGPD5Q99666 1765 aa15.83■□□□□ 0.12
SYNE3-201ENST00000334258 KCNJ6P48051 423 aa15.83■□□□□ 0.12
SYNE3-201ENST00000334258 GYS2P54840 703 aa15.83■□□□□ 0.12
SYNE3-201ENST00000334258 GJB4Q9NTQ9 266 aa15.83■□□□□ 0.12
SYNE3-201ENST00000334258 ZNF609O15014 1411 aa15.82■□□□□ 0.12
SYNE3-201ENST00000334258 CARMIL3Q8ND23 1372 aa15.82■□□□□ 0.12
SYNE3-201ENST00000334258 A0A0G2JLW4 131 aa15.82■□□□□ 0.12
SYNE3-201ENST00000334258 PATL2C9JE40 543 aaKnown RBP15.82■□□□□ 0.12
SYNE3-201ENST00000334258 IGKV5-2P06315 115 aa15.82■□□□□ 0.12
SYNE3-201ENST00000334258 LMAN1P49257 510 aa15.82■□□□□ 0.12
SYNE3-201ENST00000334258 CCDC158Q5M9N0 1113 aa15.82■□□□□ 0.12
SYNE3-201ENST00000334258 DPF2Q92785 391 aa15.82■□□□□ 0.12
SYNE3-201ENST00000334258 LOC102724159A0A0B4J2E5 919 aa15.82■□□□□ 0.12
SYNE3-201ENST00000334258 E7EWF7 191 aa15.82■□□□□ 0.12
SYNE3-201ENST00000334258 SLC20A2Q08357 652 aa15.82■□□□□ 0.12
SYNE3-201ENST00000334258 NCAPHQ15003 741 aa15.82■□□□□ 0.12
SYNE3-201ENST00000334258 PWP2Q15269 919 aaKnown RBP15.82■□□□□ 0.12
SYNE3-201ENST00000334258 TRIM65Q6PJ69 517 aa15.82■□□□□ 0.12
SYNE3-201ENST00000334258 CCDC191Q8NCU4 936 aa15.82■□□□□ 0.12
SYNE3-201ENST00000334258 BPIFA3Q9BQP9 254 aa15.82■□□□□ 0.12
SYNE3-201ENST00000334258 GPHNQ9NQX3 736 aaPredicted RBP15.82■□□□□ 0.12
SYNE3-201ENST00000334258 PHKG2P15735 406 aa15.81■□□□□ 0.12
SYNE3-201ENST00000334258 PFKFB1P16118 471 aa15.81■□□□□ 0.12
SYNE3-201ENST00000334258 ZSCAN26Q16670 478 aa15.81■□□□□ 0.12
SYNE3-201ENST00000334258 AK7Q96M32 723 aa15.81■□□□□ 0.12
SYNE3-201ENST00000334258 BTG4Q9NY30 223 aa15.81■□□□□ 0.12
SYNE3-201ENST00000334258 FEZ2Q9UHY8 353 aaPredicted RBP15.81■□□□□ 0.12
SYNE3-201ENST00000334258 MED1Q15648 1581 aaPredicted RBP15.81■□□□□ 0.12
SYNE3-201ENST00000334258 PARP3Q9Y6F1 533 aa15.81■□□□□ 0.12
SYNE3-201ENST00000334258 SASH3O75995 380 aa15.81■□□□□ 0.12
SYNE3-201ENST00000334258 SYKP43405 635 aa15.81■□□□□ 0.12
SYNE3-201ENST00000334258 CABP4P57796 275 aa15.81■□□□□ 0.12
SYNE3-201ENST00000334258 PPP2R3AQ06190 1150 aa15.81■□□□□ 0.12
SYNE3-201ENST00000334258 CC2D1AQ6P1N0 951 aaPredicted RBP15.81■□□□□ 0.12
SYNE3-201ENST00000334258 ZNF790Q6PG37 636 aa15.81■□□□□ 0.12
SYNE3-201ENST00000334258 OLFM4Q6UX06 510 aa15.81■□□□□ 0.12
SYNE3-201ENST00000334258 DDX21Q9NR30 783 aaKnown RBP eCLIP15.81■□□□□ 0.12
SYNE3-201ENST00000334258 HAND2P61296 217 aa15.8■□□□□ 0.12
SYNE3-201ENST00000334258 MYL5Q02045 173 aa15.8■□□□□ 0.12
SYNE3-201ENST00000334258 GCKRQ14397 625 aa15.8■□□□□ 0.12
SYNE3-201ENST00000334258 MYSM1Q5VVJ2 828 aa15.8■□□□□ 0.12
SYNE3-201ENST00000334258 UBE3BQ7Z3V4 1068 aa15.8■□□□□ 0.12
SYNE3-201ENST00000334258 C10orf67Q8IYJ2 551 aa15.8■□□□□ 0.12
SYNE3-201ENST00000334258 KBTBD3Q8NAB2 608 aa15.8■□□□□ 0.12
SYNE3-201ENST00000334258 PPP2R2CQ9Y2T4 447 aa15.8■□□□□ 0.12
SYNE3-201ENST00000334258 YEATS4O95619 227 aa15.8■□□□□ 0.12
SYNE3-201ENST00000334258 TBC1D8O95759 1140 aa15.8■□□□□ 0.12
SYNE3-201ENST00000334258 FDPSP14324 419 aaKnown RBP15.8■□□□□ 0.12
SYNE3-201ENST00000334258 TTLL5Q6EMB2 1281 aa15.8■□□□□ 0.12
SYNE3-201ENST00000334258 ZNF274Q96GC6 653 aaPredicted RBP15.8■□□□□ 0.12
SYNE3-201ENST00000334258 HAUS7Q99871 368 aa15.8■□□□□ 0.12
SYNE3-201ENST00000334258 EP400Q96L91 3159 aa15.8■□□□□ 0.12
SYNE3-201ENST00000334258 MEGF6O75095 1541 aa15.8■□□□□ 0.12
SYNE3-201ENST00000334258 CRYBG1Q9Y4K1 1723 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 TMEM232C9JQI7 657 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 ATP5J2-PTCD1G3V325 749 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 EXOSC10Q01780 885 aaKnown RBP15.79■□□□□ 0.12
SYNE3-201ENST00000334258 REXO1L1PQ8IX06 675 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 TTC5Q8N0Z6 440 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 XAGE3Q8WTP9 111 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 NEURL1BA8MQ27 555 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 ANO1Q5XXA6 986 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 COPS6Q7L5N1 327 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 IFNL2Q8IZJ0 200 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 GPR161Q8N6U8 529 aaKnown RBP15.79■□□□□ 0.12
SYNE3-201ENST00000334258 WDR24Q96S15 920 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 MPHOSPH8Q99549 860 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 CWC15Q9P013 229 aaKnown RBP15.79■□□□□ 0.12
SYNE3-201ENST00000334258 JCADQ9P266 1359 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 PSEN1P49768 467 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.79■□□□□ 0.12
SYNE3-201ENST00000334258 PARD6BQ9BYG5 372 aa15.79■□□□□ 0.12
SYNE3-201ENST00000334258 GOLGA8BA8MQT2 603 aa15.78■□□□□ 0.12
SYNE3-201ENST00000334258 FANCGO15287 622 aa15.78■□□□□ 0.12
SYNE3-201ENST00000334258 ARHGAP6O43182 974 aa15.78■□□□□ 0.12
SYNE3-201ENST00000334258 ATP8B1O43520 1251 aa15.78■□□□□ 0.12
SYNE3-201ENST00000334258 DHX16O60231 1041 aaKnown RBP15.78■□□□□ 0.12
SYNE3-201ENST00000334258 BAG1Q99933 345 aaPredicted RBP15.78■□□□□ 0.12
SYNE3-201ENST00000334258 POLR3EQ9NVU0 708 aa15.78■□□□□ 0.12
SYNE3-201ENST00000334258 FANCLQ9NW38 375 aa15.78■□□□□ 0.12
SYNE3-201ENST00000334258 TNS3Q68CZ2 1445 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms