RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 MAD1L1Q9Y6D9 718 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 EEF2P13639 858 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 RNASE11Q8TAA1 199 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 TNIP3Q96KP6 325 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 SIL1Q9H173 461 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 RSPH9Q9H1X1 276 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 TLK1Q9UKI8 766 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 FSCBQ5H9T9 825 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 NBPF10Q6P3W6 841 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 PPP1R14AQ96A00 147 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 LARP6Q9BRS8 491 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 G3BP1Q13283 466 aaKnown RBP eCLIP6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 MCF2L2Q86YR7 1114 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 LSM14BQ9BX40 385 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 SCOCQ9UIL1 159 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 APOEP02649 317 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 SLC9A5Q14940 896 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 ARHGAP44Q17R89 818 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 THOC7Q6I9Y2 204 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 KIFC3Q9BVG8 833 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 VPS16Q9H269 839 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 NUTM2DQ5VT03 806 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 TRIM68Q6AZZ1 485 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 DDX42Q86XP3 938 aaKnown RBP eCLIP6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 NUTM2AQ8IVF1 878 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 MRPS26Q9BYN8 205 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 ATP6V0A2Q9Y487 856 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 ERICH2A1L162 156 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 NME8Q8N427 588 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 OLFM3Q96PB7 478 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 MICAL3Q7RTP6 2002 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 GOLGA6CA6NDK9 693 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 TSC22D2O75157 780 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 TMCC1O94876 653 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 KRT8P05787 483 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 GOLGA6DP0CG33 693 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 ZC3H6P61129 1189 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 RNASE9P60153 205 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 KIF23Q02241 960 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 KRBA2Q6ZNG9 492 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 CPLX4Q7Z7G2 160 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 CEP85Q6P2H3 762 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 GOLGA5Q8TBA6 731 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 ZNF483Q8TF39 744 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 CLSTN2Q9H4D0 955 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 STMN3Q9NZ72 180 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 TSKSQ9UJT2 592 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 STK38LQ9Y2H1 464 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 ERICH3Q5RHP9 1530 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 ZNF449Q6P9G9 518 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 RFWD2Q8NHY2 731 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 CDC5LQ99459 802 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 PARVAQ9NVD7 372 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 PLB1Q6P1J6 1458 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 CETN1Q12798 172 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 DENND2CQ68D51 928 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 SHQ1Q6PI26 577 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 NUDCD3Q8IVD9 361 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 TRERF1Q96PN7 1200 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 TMOD2Q9NZR1 351 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 JRKLQ9Y4A0 524 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 V9GYQ6 96 aa6.8□□□□□ -1.32
CDC42BPA-201ENST00000334218 IQANK1A0A1B0GTG1 560 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 TARSL2A2RTX5 802 aaKnown RBP6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 INPP1P49441 399 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 PPP1R42Q7Z4L9 355 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 RAB14P61106 215 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 CCDC15Q0P6D6 951 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 CCDC142Q17RM4 750 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 LUZP2Q86TE4 346 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 GINS4Q9BRT9 223 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 DNAJC5Q9H3Z4 198 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 RAD21L1Q9H4I0 556 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 POTECB2RU33 542 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 SNAP25P60880 206 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 TP53INP1Q96A56 240 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 UTP14AQ9BVJ6 771 aaKnown RBP6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 CRTAPO75718 401 aaPredicted RBP6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 LMNB1P20700 586 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 PAFAH1B1P43034 410 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 DSEQ9UL01 958 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 CSPG5O95196 566 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 CAPN1P07384 714 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 RASIP1Q5U651 963 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 PIP4K2CQ8TBX8 421 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 JMYQ8N9B5 988 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 WASHC2AQ641Q2 1341 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 ARPC4-TTLL3A0A0A6YYG9 625 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 VGLL3A8MV65 326 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 ZNF500O60304 480 aaPredicted RBP6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 PDE6BP35913 854 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 ASZ1Q8WWH4 475 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 BRPF3Q9ULD4 1205 aa6.79□□□□□ -1.32
CDC42BPA-201ENST00000334218 ANGPT2O15123 496 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 SMARCA1P28370 1054 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 ADCK1Q86TW2 530 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 FLCNQ8NFG4 579 aa6.78□□□□□ -1.32
CDC42BPA-201ENST00000334218 CLUP10909 449 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms