RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 NCAPHQ15003 741 aa20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 EDC3Q96F86 508 aaKnown RBP20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 ZCCHC17Q9NP64 241 aaKnown RBP20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 U3KPZ7 1027 aaPredicted RBP20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 UBR2Q8IWV8 1755 aa20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 PAPPAQ13219 1627 aa20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 A0A1W2PQ27 194 aa20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 A0A1W2PQ64 194 aa20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 A0A1W2PQD8 194 aa20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 CYP21A2P08686 494 aa20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 SMC1AQ14683 1233 aaKnown RBP20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 SUCLG2Q96I99 432 aa20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 SIL1Q9H173 461 aa20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 LAMB4A4D0S4 1761 aa20.94■□□□□ 0.94
CLSTN3-202ENST00000331148 ZSCAN26Q16670 478 aa20.93■□□□□ 0.94
CLSTN3-202ENST00000331148 CWF19L2Q2TBE0 894 aaKnown RBP20.93■□□□□ 0.94
CLSTN3-202ENST00000331148 ADALQ6DHV7 355 aa20.93■□□□□ 0.94
CLSTN3-202ENST00000331148 SPATA31A5Q5VU36 1347 aa20.93■□□□□ 0.94
CLSTN3-202ENST00000331148 SPATA31A7Q8IWB4 1347 aa20.93■□□□□ 0.94
CLSTN3-202ENST00000331148 PTCD1O75127 700 aaKnown RBP20.93■□□□□ 0.94
CLSTN3-202ENST00000331148 FANCCQ00597 558 aa20.93■□□□□ 0.94
CLSTN3-202ENST00000331148 COPS6Q7L5N1 327 aa20.93■□□□□ 0.94
CLSTN3-202ENST00000331148 REXO1L1PQ8IX06 675 aa20.93■□□□□ 0.94
CLSTN3-202ENST00000331148 EPC1Q9H2F5 836 aa20.93■□□□□ 0.94
CLSTN3-202ENST00000331148 RASSF4Q9H2L5 321 aa20.93■□□□□ 0.94
CLSTN3-202ENST00000331148 GLI3P10071 1580 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 KCPQ6ZWJ8 1503 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 NLRP12P59046 1061 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 GUCY1B3Q02153 619 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 XAGE3Q8WTP9 111 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 PIGBQ92521 554 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 KAZALD1Q96I82 304 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 SEC62Q99442 399 aaKnown RBP20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 RTEL1Q9NZ71 1219 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 CCDC9Q9Y3X0 531 aaKnown RBP20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 SALL1Q9NSC2 1324 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 BIN1O00499 593 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 LRP10Q7Z4F1 713 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 RIC3Q7Z5B4 369 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 CCDC191Q8NCU4 936 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 CCDC34Q96HJ3 373 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 TMX1Q9H3N1 280 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 BICC1Q9H694 974 aaKnown RBP20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 TNS2Q63HR2 1409 aa20.92■□□□□ 0.94
CLSTN3-202ENST00000331148 ZNF609O15014 1411 aa20.91■□□□□ 0.94
CLSTN3-202ENST00000331148 CCDC129Q6ZRS4 1044 aa20.91■□□□□ 0.94
CLSTN3-202ENST00000331148 STOX1Q6ZVD7 989 aa20.91■□□□□ 0.94
CLSTN3-202ENST00000331148 LMOD1P29536 600 aaPredicted RBP20.9■□□□□ 0.94
CLSTN3-202ENST00000331148 APOBRQ0VD83 1088 aa20.9■□□□□ 0.94
CLSTN3-202ENST00000331148 DDB1Q16531 1140 aa20.9■□□□□ 0.94
CLSTN3-202ENST00000331148 GPR161Q8N6U8 529 aaKnown RBP20.9■□□□□ 0.94
CLSTN3-202ENST00000331148 LRP6O75581 1613 aa20.9■□□□□ 0.94
CLSTN3-202ENST00000331148 SLC3A2P08195 630 aaKnown RBP20.9■□□□□ 0.94
CLSTN3-202ENST00000331148 PIP4K2AP48426 406 aaPredicted RBP20.9■□□□□ 0.94
CLSTN3-202ENST00000331148 LINS1Q8NG48 757 aa20.9■□□□□ 0.94
CLSTN3-202ENST00000331148 NGLY1Q96IV0 654 aa20.9■□□□□ 0.94
CLSTN3-202ENST00000331148 ATP1A3P13637 1013 aa20.89■□□□□ 0.94
CLSTN3-202ENST00000331148 CCT2P78371 535 aaKnown RBP20.89■□□□□ 0.94
CLSTN3-202ENST00000331148 FCHSD1Q86WN1 690 aa20.89■□□□□ 0.94
CLSTN3-202ENST00000331148 AK7Q96M32 723 aa20.89■□□□□ 0.94
CLSTN3-202ENST00000331148 CWC15Q9P013 229 aaKnown RBP20.89■□□□□ 0.94
CLSTN3-202ENST00000331148 ITGB4P16144 1822 aa20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 VWA3AA6NCI4 1184 aa20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 MYO1CO00159 1063 aa20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 GRM8O00222 908 aa20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 IKBKBO14920 756 aa20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 BARGINQ6ZT62 677 aa20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 ANKRD13DQ6ZTN6 518 aa20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 DHX32Q7L7V1 743 aaKnown RBP20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 LINC00301Q8NCQ3 95 aa20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 C8orf37Q96NL8 207 aa20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 MPHOSPH8Q99549 860 aa20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 UTP14AQ9BVJ6 771 aaKnown RBP20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 HSD3B7Q9H2F3 369 aa20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 NCOA5Q9HCD5 579 aaKnown RBP20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 ARFGAP3Q9NP61 516 aa20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 RSPH14Q9UHP6 348 aa20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 ASAP1Q9ULH1 1129 aa20.89■□□□□ 0.93
CLSTN3-202ENST00000331148 PPFIA3O75145 1194 aa20.88■□□□□ 0.93
CLSTN3-202ENST00000331148 HMGB1P09429 215 aaKnown RBP20.88■□□□□ 0.93
CLSTN3-202ENST00000331148 GOLGA5Q8TBA6 731 aa20.88■□□□□ 0.93
CLSTN3-202ENST00000331148 EFCC1Q9HA90 598 aa20.88■□□□□ 0.93
CLSTN3-202ENST00000331148 LCMT1Q9UIC8 334 aa20.88■□□□□ 0.93
CLSTN3-202ENST00000331148 RFX7Q2KHR2 1363 aa20.88■□□□□ 0.93
CLSTN3-202ENST00000331148 ZSCAN12O43309 604 aa20.88■□□□□ 0.93
CLSTN3-202ENST00000331148 CHGBP05060 677 aa20.88■□□□□ 0.93
CLSTN3-202ENST00000331148 STK38Q15208 465 aa20.88■□□□□ 0.93
CLSTN3-202ENST00000331148 EXOC4Q96A65 974 aa20.88■□□□□ 0.93
CLSTN3-202ENST00000331148 ATG3Q9NT62 314 aa20.88■□□□□ 0.93
CLSTN3-202ENST00000331148 CARMIL3Q8ND23 1372 aa20.88■□□□□ 0.93
CLSTN3-202ENST00000331148 TNNT3P45378 269 aaPredicted RBP20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 PPP2R3AQ06190 1150 aa20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 NEXNQ0ZGT2 675 aa20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 SF3A1Q15459 793 aaKnown RBP20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 RSRC2Q7L4I2 434 aaKnown RBP20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 DPF2Q92785 391 aa20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 FUT8Q9BYC5 575 aa20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 PSD3Q9NYI0 1048 aa20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 UTYO14607 1347 aa20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 TRIM66O15016 1216 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms