RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 HDAC5Q9UQL6 1122 aa27.95■■■□□ 2.06
SOX1-201ENST00000330949 BOLA2Q9H3K6 86 aa27.95■■■□□ 2.06
SOX1-201ENST00000330949 L1RE1Q9UN81 338 aa27.95■■■□□ 2.06
SOX1-201ENST00000330949 ZNF202O95125 648 aa27.94■■■□□ 2.06
SOX1-201ENST00000330949 CTDNEP1O95476 244 aa27.94■■■□□ 2.06
SOX1-201ENST00000330949 MMS22LQ6ZRQ5 1243 aa27.94■■■□□ 2.06
SOX1-201ENST00000330949 CEP112Q8N8E3 955 aa27.94■■■□□ 2.06
SOX1-201ENST00000330949 AKAP2Q9Y2D5 859 aa27.94■■■□□ 2.06
SOX1-201ENST00000330949 U3KPZ7 1027 aaPredicted RBP27.94■■■□□ 2.06
SOX1-201ENST00000330949 HMGB1P09429 215 aaKnown RBP27.94■■■□□ 2.06
SOX1-201ENST00000330949 MSANTD4Q8NCY6 345 aa27.94■■■□□ 2.06
SOX1-201ENST00000330949 ANKZF1Q9H8Y5 726 aa27.94■■■□□ 2.06
SOX1-201ENST00000330949 NWD1Q149M9 1564 aa27.94■■■□□ 2.06
SOX1-201ENST00000330949 BTBD11A6QL63 1104 aa27.93■■■□□ 2.06
SOX1-201ENST00000330949 AIMP1Q12904 312 aaKnown RBP27.93■■■□□ 2.06
SOX1-201ENST00000330949 ESCO1Q5FWF5 840 aa27.93■■■□□ 2.06
SOX1-201ENST00000330949 LRRC31Q6UY01 552 aa27.93■■■□□ 2.06
SOX1-201ENST00000330949 ACBD3Q9H3P7 528 aa27.93■■■□□ 2.06
SOX1-201ENST00000330949 EIF4A1P60842 406 aaKnown RBP27.93■■■□□ 2.06
SOX1-201ENST00000330949 ZNF530Q6P9A1 599 aaPredicted RBP27.93■■■□□ 2.06
SOX1-201ENST00000330949 EAF2Q96CJ1 260 aaPredicted RBP27.93■■■□□ 2.06
SOX1-201ENST00000330949 CUTAO60888 179 aa27.92■■■□□ 2.06
SOX1-201ENST00000330949 YEATS4O95619 227 aa27.92■■■□□ 2.06
SOX1-201ENST00000330949 GOLGA8FQ08AF8 430 aa27.92■■■□□ 2.06
SOX1-201ENST00000330949 GOLGA8DPQ0D2H9 430 aa27.92■■■□□ 2.06
SOX1-201ENST00000330949 CWF19L2Q2TBE0 894 aaKnown RBP27.92■■■□□ 2.06
SOX1-201ENST00000330949 AXDND1Q5T1B0 1012 aaPredicted RBP27.92■■■□□ 2.06
SOX1-201ENST00000330949 MCTP2Q6DN12 878 aa27.92■■■□□ 2.06
SOX1-201ENST00000330949 PROSER3Q2NL68 480 aa27.92■■■□□ 2.06
SOX1-201ENST00000330949 N4BP1O75113 896 aaKnown RBP27.91■■■□□ 2.06
SOX1-201ENST00000330949 PPFIA4O75335 1185 aa27.91■■■□□ 2.06
SOX1-201ENST00000330949 GPATCH11Q8N954 259 aa27.91■■■□□ 2.06
SOX1-201ENST00000330949 GBP3Q9H0R5 595 aa27.91■■■□□ 2.06
SOX1-201ENST00000330949 CCDC8Q9H0W5 538 aaPredicted RBP27.91■■■□□ 2.06
SOX1-201ENST00000330949 SALL1Q9NSC2 1324 aa27.91■■■□□ 2.06
SOX1-201ENST00000330949 FAM107BQ9H098 131 aa27.91■■■□□ 2.06
SOX1-201ENST00000330949 MED4Q9NPJ6 270 aa27.91■■■□□ 2.06
SOX1-201ENST00000330949 ARHGAP23Q9P227 1491 aa27.91■■■□□ 2.06
SOX1-201ENST00000330949 GUCY1B3Q02153 619 aa27.91■■■□□ 2.06
SOX1-201ENST00000330949 LRRC2Q9BYS8 371 aa27.91■■■□□ 2.06
SOX1-201ENST00000330949 ZSWIM4Q9H7M6 989 aa27.91■■■□□ 2.06
SOX1-201ENST00000330949 POLR3EQ9NVU0 708 aa27.91■■■□□ 2.06
SOX1-201ENST00000330949 C9orf78Q9NZ63 289 aaPredicted RBP27.91■■■□□ 2.06
SOX1-201ENST00000330949 PHF8Q9UPP1 1060 aa27.91■■■□□ 2.06
SOX1-201ENST00000330949 CNNM3Q8NE01 707 aa27.9■■■□□ 2.06
SOX1-201ENST00000330949 CEP89Q96ST8 783 aa27.9■■■□□ 2.06
SOX1-201ENST00000330949 SPTLC2O15270 562 aa27.9■■■□□ 2.06
SOX1-201ENST00000330949 TUBB2AQ13885 445 aa27.9■■■□□ 2.06
SOX1-201ENST00000330949 SART3Q15020 963 aaKnown RBP27.9■■■□□ 2.06
SOX1-201ENST00000330949 TOGARAM2Q6ZUX3 1019 aa27.9■■■□□ 2.06
SOX1-201ENST00000330949 TADA2BQ86TJ2 420 aa27.9■■■□□ 2.06
SOX1-201ENST00000330949 CCDC102AQ96A19 550 aa27.9■■■□□ 2.06
SOX1-201ENST00000330949 TUBB2BQ9BVA1 445 aa27.9■■■□□ 2.06
SOX1-201ENST00000330949 CLGNO14967 610 aa27.89■■■□□ 2.06
SOX1-201ENST00000330949 G3BP1Q13283 466 aaKnown RBP eCLIP27.89■■■□□ 2.06
SOX1-201ENST00000330949 DNAJC21Q5F1R6 531 aaKnown RBP27.89■■■□□ 2.06
SOX1-201ENST00000330949 A0A087WUV0 522 aaPredicted RBP27.89■■■□□ 2.05
SOX1-201ENST00000330949 WDHD1O75717 1129 aaPredicted RBP27.89■■■□□ 2.05
SOX1-201ENST00000330949 CYP21A2P08686 494 aa27.89■■■□□ 2.05
SOX1-201ENST00000330949 ABCB6Q9NP58 842 aa27.89■■■□□ 2.05
SOX1-201ENST00000330949 SLIT1O75093 1534 aa27.89■■■□□ 2.05
SOX1-201ENST00000330949 TMEM232C9JQI7 657 aa27.88■■■□□ 2.05
SOX1-201ENST00000330949 TUBBP07437 444 aa27.88■■■□□ 2.05
SOX1-201ENST00000330949 DHX32Q7L7V1 743 aaKnown RBP27.88■■■□□ 2.05
SOX1-201ENST00000330949 SASH1O94885 1247 aa27.88■■■□□ 2.05
SOX1-201ENST00000330949 TBX2Q13207 712 aaPredicted RBP27.88■■■□□ 2.05
SOX1-201ENST00000330949 TUBE1Q9UJT0 475 aa27.88■■■□□ 2.05
SOX1-201ENST00000330949 CDC23Q9UJX2 597 aa27.88■■■□□ 2.05
SOX1-201ENST00000330949 CASP8Q14790 479 aa27.87■■■□□ 2.05
SOX1-201ENST00000330949 PNKPQ96T60 521 aa27.87■■■□□ 2.05
SOX1-201ENST00000330949 MAP3K2Q9Y2U5 619 aa27.87■■■□□ 2.05
SOX1-201ENST00000330949 EIF5P55010 431 aaKnown RBP27.87■■■□□ 2.05
SOX1-201ENST00000330949 PDILTQ8N807 584 aa27.87■■■□□ 2.05
SOX1-201ENST00000330949 CLIC4Q9Y696 253 aa27.87■■■□□ 2.05
SOX1-201ENST00000330949 CARMIL3Q8ND23 1372 aa27.87■■■□□ 2.05
SOX1-201ENST00000330949 NCAPD2Q15021 1401 aa27.87■■■□□ 2.05
SOX1-201ENST00000330949 BICC1Q9H694 974 aaKnown RBP27.87■■■□□ 2.05
SOX1-201ENST00000330949 CMA1P23946 247 aa27.86■■■□□ 2.05
SOX1-201ENST00000330949 CCT2P78371 535 aaKnown RBP27.86■■■□□ 2.05
SOX1-201ENST00000330949 ISM2Q6H9L7 571 aa27.86■■■□□ 2.05
SOX1-201ENST00000330949 SEC62Q99442 399 aaKnown RBP27.86■■■□□ 2.05
SOX1-201ENST00000330949 TLR7Q9NYK1 1049 aaKnown RBP27.86■■■□□ 2.05
SOX1-201ENST00000330949 PUF60Q9UHX1 559 aaKnown RBP27.86■■■□□ 2.05
SOX1-201ENST00000330949 PFKFB1P16118 471 aa27.85■■■□□ 2.05
SOX1-201ENST00000330949 GSCP56915 257 aaPredicted RBP27.85■■■□□ 2.05
SOX1-201ENST00000330949 OLFM4Q6UX06 510 aa27.85■■■□□ 2.05
SOX1-201ENST00000330949 FAM204AQ9H8W3 233 aa27.85■■■□□ 2.05
SOX1-201ENST00000330949 COL15A1P39059 1388 aa27.85■■■□□ 2.05
SOX1-201ENST00000330949 CCDC175P0C221 793 aa27.85■■■□□ 2.05
SOX1-201ENST00000330949 KARSQ15046 597 aaKnown RBP27.85■■■□□ 2.05
SOX1-201ENST00000330949 E2F4Q16254 413 aa27.85■■■□□ 2.05
SOX1-201ENST00000330949 TC2NQ8N9U0 490 aa27.85■■■□□ 2.05
SOX1-201ENST00000330949 APPP05067 770 aa27.84■■■□□ 2.05
SOX1-201ENST00000330949 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.84■■■□□ 2.05
SOX1-201ENST00000330949 HOXB7P09629 217 aa27.84■■■□□ 2.05
SOX1-201ENST00000330949 AGXT2Q9BYV1 514 aa27.83■■■□□ 2.05
SOX1-201ENST00000330949 MARF1Q9Y4F3 1742 aaKnown RBP27.83■■■□□ 2.05
SOX1-201ENST00000330949 ANKRD65E5RJM6 399 aa27.83■■■□□ 2.05
SOX1-201ENST00000330949 SPECC1LQ69YQ0 1117 aa27.83■■■□□ 2.05
SOX1-201ENST00000330949 KLHDC4Q8TBB5 520 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms