RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 KLHL40Q2TBA0 621 aa20.06■□□□□ 0.8
DDX41-201ENST00000330503 TBC1D10CQ8IV04 446 aa20.06■□□□□ 0.8
DDX41-201ENST00000330503 PNPLA7Q6ZV29 1317 aa20.06■□□□□ 0.8
DDX41-201ENST00000330503 SEMA3EO15041 775 aa20.05■□□□□ 0.8
DDX41-201ENST00000330503 F13A1P00488 732 aa20.05■□□□□ 0.8
DDX41-201ENST00000330503 CYP7A1P22680 504 aa20.05■□□□□ 0.8
DDX41-201ENST00000330503 RXRBP28702 533 aa20.05■□□□□ 0.8
DDX41-201ENST00000330503 NCOA7Q8NI08 942 aa20.05■□□□□ 0.8
DDX41-201ENST00000330503 DDX49Q9Y6V7 483 aaKnown RBP20.05■□□□□ 0.8
DDX41-201ENST00000330503 HMGB2P26583 209 aaKnown RBP20.05■□□□□ 0.8
DDX41-201ENST00000330503 EVCP57679 992 aa20.05■□□□□ 0.8
DDX41-201ENST00000330503 ST5P78524 1137 aa20.05■□□□□ 0.8
DDX41-201ENST00000330503 FOXD4L6Q3SYB3 417 aaPredicted RBP20.05■□□□□ 0.8
DDX41-201ENST00000330503 LARP1BQ659C4 914 aaKnown RBP20.05■□□□□ 0.8
DDX41-201ENST00000330503 FOXD4L3Q6VB84 417 aaPredicted RBP20.05■□□□□ 0.8
DDX41-201ENST00000330503 ZNF384Q8TF68 577 aa20.05■□□□□ 0.8
DDX41-201ENST00000330503 RAI14Q9P0K7 980 aa20.05■□□□□ 0.8
DDX41-201ENST00000330503 ZMYM6O95789 1325 aa20.05■□□□□ 0.8
DDX41-201ENST00000330503 PRC1O43663 620 aa20.04■□□□□ 0.8
DDX41-201ENST00000330503 JAK2O60674 1132 aa20.04■□□□□ 0.8
DDX41-201ENST00000330503 MCM5P33992 734 aa20.04■□□□□ 0.8
DDX41-201ENST00000330503 MIGA1Q8NAN2 632 aa20.04■□□□□ 0.8
DDX41-201ENST00000330503 ZNF274Q96GC6 653 aaPredicted RBP20.04■□□□□ 0.8
DDX41-201ENST00000330503 PDS5AQ29RF7 1337 aaKnown RBP20.03■□□□□ 0.8
DDX41-201ENST00000330503 PDIA3P30101 505 aaKnown RBP20.03■□□□□ 0.8
DDX41-201ENST00000330503 COL23A1Q86Y22 540 aaPredicted RBP20.03■□□□□ 0.8
DDX41-201ENST00000330503 CACNA1SQ13698 1873 aa20.03■□□□□ 0.8
DDX41-201ENST00000330503 ZBTB22O15209 634 aa20.03■□□□□ 0.8
DDX41-201ENST00000330503 SMARCC2Q8TAQ2 1214 aa20.03■□□□□ 0.8
DDX41-201ENST00000330503 GPT2Q8TD30 523 aa20.03■□□□□ 0.8
DDX41-201ENST00000330503 RPGRQ92834 1020 aaKnown RBP20.03■□□□□ 0.8
DDX41-201ENST00000330503 LEMD3Q9Y2U8 911 aa20.03■□□□□ 0.8
DDX41-201ENST00000330503 TACC3Q9Y6A5 838 aa20.03■□□□□ 0.8
DDX41-201ENST00000330503 SLC4A4Q9Y6R1 1079 aa20.03■□□□□ 0.8
DDX41-201ENST00000330503 CTDNEP1O95476 244 aa20.02■□□□□ 0.8
DDX41-201ENST00000330503 GNAT2P19087 354 aa20.02■□□□□ 0.8
DDX41-201ENST00000330503 ANKIB1Q9P2G1 1089 aa20.02■□□□□ 0.8
DDX41-201ENST00000330503 WDR19Q8NEZ3 1342 aa20.02■□□□□ 0.79
DDX41-201ENST00000330503 KLRG2A4D1S0 409 aaPredicted RBP20.02■□□□□ 0.79
DDX41-201ENST00000330503 INCENPQ9NQS7 918 aa20.02■□□□□ 0.79
DDX41-201ENST00000330503 HOXA10P31260 410 aaPredicted RBP20.01■□□□□ 0.79
DDX41-201ENST00000330503 CCT2P78371 535 aaKnown RBP20.01■□□□□ 0.79
DDX41-201ENST00000330503 CYB5R4Q7L1T6 521 aa20.01■□□□□ 0.79
DDX41-201ENST00000330503 RALYLQ86SE5 291 aaKnown RBP20.01■□□□□ 0.79
DDX41-201ENST00000330503 RBM17Q96I25 401 aaKnown RBP20.01■□□□□ 0.79
DDX41-201ENST00000330503 RIOK1Q9BRS2 568 aaKnown RBP20.01■□□□□ 0.79
DDX41-201ENST00000330503 LLPHQ9BRT6 129 aaKnown RBP20.01■□□□□ 0.79
DDX41-201ENST00000330503 NAPBQ9H115 298 aa20.01■□□□□ 0.79
DDX41-201ENST00000330503 BRPF3Q9ULD4 1205 aa20.01■□□□□ 0.79
DDX41-201ENST00000330503 XDHP47989 1333 aa20.01■□□□□ 0.79
DDX41-201ENST00000330503 FSD2A1L4K1 749 aa20■□□□□ 0.79
DDX41-201ENST00000330503 VPS37CA5D8V6 355 aaPredicted RBP20■□□□□ 0.79
DDX41-201ENST00000330503 PDIA4P13667 645 aaKnown RBP20■□□□□ 0.79
DDX41-201ENST00000330503 PDCP20941 246 aa20■□□□□ 0.79
DDX41-201ENST00000330503 GPSM2P81274 684 aa20■□□□□ 0.79
DDX41-201ENST00000330503 NSUN7Q8NE18 718 aaKnown RBP20■□□□□ 0.79
DDX41-201ENST00000330503 RGS17Q9UGC6 210 aaPredicted RBP20■□□□□ 0.79
DDX41-201ENST00000330503 TCHHQ07283 1943 aa20■□□□□ 0.79
DDX41-201ENST00000330503 MAGEB6P1A0A0J9YX57 407 aa20■□□□□ 0.79
DDX41-201ENST00000330503 CTDSPL2Q05D32 466 aa20■□□□□ 0.79
DDX41-201ENST00000330503 USP48Q86UV5 1035 aa20■□□□□ 0.79
DDX41-201ENST00000330503 GDPD2Q9HCC8 539 aa20■□□□□ 0.79
DDX41-201ENST00000330503 NCOA5Q9HCD5 579 aaKnown RBP20■□□□□ 0.79
DDX41-201ENST00000330503 NSFL1CQ9UNZ2 370 aaKnown RBP20■□□□□ 0.79
DDX41-201ENST00000330503 TRDNQ13061 729 aa19.99■□□□□ 0.79
DDX41-201ENST00000330503 CDC37L1Q7L3B6 337 aa19.99■□□□□ 0.79
DDX41-201ENST00000330503 NSUN4Q96CB9 384 aaKnown RBP19.99■□□□□ 0.79
DDX41-201ENST00000330503 CNPY2Q9Y2B0 182 aa19.99■□□□□ 0.79
DDX41-201ENST00000330503 NEDD4P46934 1319 aa19.99■□□□□ 0.79
DDX41-201ENST00000330503 DYNLL1P63167 89 aaKnown RBP19.99■□□□□ 0.79
DDX41-201ENST00000330503 CHAF1AQ13111 956 aaPredicted RBP19.99■□□□□ 0.79
DDX41-201ENST00000330503 NAA16Q6N069 864 aaPredicted RBP19.99■□□□□ 0.79
DDX41-201ENST00000330503 C15orf52Q6ZUT6 534 aaKnown RBP19.99■□□□□ 0.79
DDX41-201ENST00000330503 B4E1Z4 1266 aa19.98■□□□□ 0.79
DDX41-201ENST00000330503 NCLP19338 710 aaKnown RBP19.98■□□□□ 0.79
DDX41-201ENST00000330503 MECOMQ03112 1051 aa19.98■□□□□ 0.79
DDX41-201ENST00000330503 NLGN1Q8N2Q7 840 aa19.98■□□□□ 0.79
DDX41-201ENST00000330503 TMEM87AQ8NBN3 555 aa19.98■□□□□ 0.79
DDX41-201ENST00000330503 DDX11Q96FC9 970 aa19.98■□□□□ 0.79
DDX41-201ENST00000330503 GPR101Q96P66 508 aaPredicted RBP19.98■□□□□ 0.79
DDX41-201ENST00000330503 CRAMP1Q96RY5 1269 aa19.98■□□□□ 0.79
DDX41-201ENST00000330503 NACAP1Q9BZK3 213 aa19.98■□□□□ 0.79
DDX41-201ENST00000330503 NAP1L2Q9ULW6 460 aaPredicted RBP19.98■□□□□ 0.79
DDX41-201ENST00000330503 HPS5Q9UPZ3 1129 aa19.98■□□□□ 0.79
DDX41-201ENST00000330503 MYH13Q9UKX3 1938 aa19.98■□□□□ 0.79
DDX41-201ENST00000330503 GADD45BO75293 160 aaPredicted RBP19.97■□□□□ 0.79
DDX41-201ENST00000330503 BBOX1O75936 387 aa19.97■□□□□ 0.79
DDX41-201ENST00000330503 ATP6V1DQ9Y5K8 247 aa19.97■□□□□ 0.79
DDX41-201ENST00000330503 TDO2P48775 406 aa19.97■□□□□ 0.79
DDX41-201ENST00000330503 TDRD7Q8NHU6 1098 aaKnown RBP19.97■□□□□ 0.79
DDX41-201ENST00000330503 SDR42E1Q8WUS8 393 aa19.97■□□□□ 0.79
DDX41-201ENST00000330503 KLF18A0A0U1RQI7 1052 aa19.96■□□□□ 0.79
DDX41-201ENST00000330503 AKNAD1Q5T1N1 836 aa19.96■□□□□ 0.79
DDX41-201ENST00000330503 JAG2Q9Y219 1238 aa19.96■□□□□ 0.79
DDX41-201ENST00000330503 SALL1Q9NSC2 1324 aa19.96■□□□□ 0.79
DDX41-201ENST00000330503 PTPDC1A2A3K4 754 aa19.96■□□□□ 0.79
DDX41-201ENST00000330503 SH2B2O14492 632 aaPredicted RBP19.96■□□□□ 0.79
DDX41-201ENST00000330503 PRDX5P30044 214 aa19.96■□□□□ 0.79
DDX41-201ENST00000330503 DNM1Q05193 864 aaKnown RBP19.96■□□□□ 0.79
DDX41-201ENST00000330503 CAVIN1Q6NZI2 390 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms