RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 SPTLC3Q9NUV7 552 aa15.95■□□□□ 0.14
EPHB3-201ENST00000330394 FBXO3Q9UK99 471 aa15.95■□□□□ 0.14
EPHB3-201ENST00000330394 IL15P40933 162 aaPredicted RBP15.95■□□□□ 0.14
EPHB3-201ENST00000330394 SPAG1Q07617 926 aa15.95■□□□□ 0.14
EPHB3-201ENST00000330394 CCDC42Q96M95 316 aa15.95■□□□□ 0.14
EPHB3-201ENST00000330394 SLF1Q9BQI6 1058 aa15.95■□□□□ 0.14
EPHB3-201ENST00000330394 SSH2Q76I76 1423 aa15.94■□□□□ 0.14
EPHB3-201ENST00000330394 PFKFB1P16118 471 aa15.94■□□□□ 0.14
EPHB3-201ENST00000330394 MYSM1Q5VVJ2 828 aa15.94■□□□□ 0.14
EPHB3-201ENST00000330394 BICDL1Q6ZP65 573 aa15.94■□□□□ 0.14
EPHB3-201ENST00000330394 NAPGQ99747 312 aaPredicted RBP15.94■□□□□ 0.14
EPHB3-201ENST00000330394 NAA15Q9BXJ9 866 aaKnown RBP15.94■□□□□ 0.14
EPHB3-201ENST00000330394 VAT1LQ9HCJ6 419 aa15.94■□□□□ 0.14
EPHB3-201ENST00000330394 DDX41Q9UJV9 622 aaKnown RBP15.94■□□□□ 0.14
EPHB3-201ENST00000330394 SF3A3Q12874 501 aaKnown RBP eCLIP15.94■□□□□ 0.14
EPHB3-201ENST00000330394 SPTY2D1Q68D10 685 aaPredicted RBP15.94■□□□□ 0.14
EPHB3-201ENST00000330394 ADALQ6DHV7 355 aa15.94■□□□□ 0.14
EPHB3-201ENST00000330394 EHBP1Q8NDI1 1231 aa15.94■□□□□ 0.14
EPHB3-201ENST00000330394 RNF41Q9H4P4 317 aaPredicted RBP15.94■□□□□ 0.14
EPHB3-201ENST00000330394 USP27XA6NNY8 438 aa15.94■□□□□ 0.14
EPHB3-201ENST00000330394 ZFYP08048 801 aaPredicted RBP15.94■□□□□ 0.14
EPHB3-201ENST00000330394 ZSCAN20P17040 1043 aaPredicted RBP15.94■□□□□ 0.14
EPHB3-201ENST00000330394 CHRNA2Q15822 529 aa15.94■□□□□ 0.14
EPHB3-201ENST00000330394 CCDC144BQ3MJ40 725 aa15.94■□□□□ 0.14
EPHB3-201ENST00000330394 CNGA4Q8IV77 575 aa15.94■□□□□ 0.14
EPHB3-201ENST00000330394 GPR161Q8N6U8 529 aaKnown RBP15.94■□□□□ 0.14
EPHB3-201ENST00000330394 ZNF594Q96JF6 807 aaPredicted RBP15.94■□□□□ 0.14
EPHB3-201ENST00000330394 PLEKHA4Q9H4M7 779 aa15.94■□□□□ 0.14
EPHB3-201ENST00000330394 PPP2R2CQ9Y2T4 447 aa15.94■□□□□ 0.14
EPHB3-201ENST00000330394 ANKRD18BA2A2Z9 1011 aa15.93■□□□□ 0.14
EPHB3-201ENST00000330394 NDUFAB1O14561 156 aa15.93■□□□□ 0.14
EPHB3-201ENST00000330394 STAT6P42226 847 aa15.93■□□□□ 0.14
EPHB3-201ENST00000330394 RNASE9P60153 205 aaKnown RBP15.93■□□□□ 0.14
EPHB3-201ENST00000330394 PDE11AQ9HCR9 933 aa15.93■□□□□ 0.14
EPHB3-201ENST00000330394 ZCCHC17Q9NP64 241 aaKnown RBP15.93■□□□□ 0.14
EPHB3-201ENST00000330394 KRT9P35527 623 aa15.93■□□□□ 0.14
EPHB3-201ENST00000330394 IGHMBP2P38935 993 aaKnown RBP15.93■□□□□ 0.14
EPHB3-201ENST00000330394 CCDC40Q4G0X9 1142 aa15.93■□□□□ 0.14
EPHB3-201ENST00000330394 AKAP4Q5JQC9 854 aa15.93■□□□□ 0.14
EPHB3-201ENST00000330394 IL17REQ8NFR9 667 aa15.93■□□□□ 0.14
EPHB3-201ENST00000330394 MKNK2Q9HBH9 465 aa15.93■□□□□ 0.14
EPHB3-201ENST00000330394 KIF24Q5T7B8 1368 aa15.93■□□□□ 0.14
EPHB3-201ENST00000330394 KDM5DQ9BY66 1539 aa15.93■□□□□ 0.14
EPHB3-201ENST00000330394 VWA3AA6NCI4 1184 aa15.93■□□□□ 0.14
EPHB3-201ENST00000330394 TCERG1LQ5VWI1 586 aa15.93■□□□□ 0.14
EPHB3-201ENST00000330394 TACC1O75410 805 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 ERCC3P19447 782 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 GBP2P32456 591 aaPredicted RBP15.92■□□□□ 0.14
EPHB3-201ENST00000330394 KMT5BQ4FZB7 885 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 ST7Q9NRC1 585 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 TCP11L1Q9NUJ3 509 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 SAMD9LQ8IVG5 1584 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 ZNF853P0CG23 659 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 SPECC1LQ69YQ0 1117 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 TLR7Q9NYK1 1049 aaKnown RBP15.92■□□□□ 0.14
EPHB3-201ENST00000330394 ADGBQ8N7X0 1667 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 NF2P35240 595 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 SCRN1Q12765 414 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 KRT40Q6A162 431 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 FAM135BQ49AJ0 1406 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 KIAA0232Q92628 1395 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 GOLGA6L10A0A0M3HER8 536 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 EFCAB8A8MWE9 144 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 OPA1O60313 960 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 ZNF174Q15697 407 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 ZNF589Q86UQ0 364 aaPredicted RBP15.92■□□□□ 0.14
EPHB3-201ENST00000330394 DIS3L2Q8IYB7 885 aaKnown RBP15.92■□□□□ 0.14
EPHB3-201ENST00000330394 KBTBD3Q8NAB2 608 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 MAP4K1Q92918 833 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 SCLT1Q96NL6 688 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 DDX21Q9NR30 783 aaKnown RBP eCLIP15.92■□□□□ 0.14
EPHB3-201ENST00000330394 CLIC4Q9Y696 253 aa15.92■□□□□ 0.14
EPHB3-201ENST00000330394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.92■□□□□ 0.14
EPHB3-201ENST00000330394 E7EWF7 191 aa15.91■□□□□ 0.14
EPHB3-201ENST00000330394 PSMA7O14818 248 aa15.91■□□□□ 0.14
EPHB3-201ENST00000330394 CLIC6Q96NY7 704 aa15.91■□□□□ 0.14
EPHB3-201ENST00000330394 KDM5AP29375 1690 aaKnown RBP15.91■□□□□ 0.14
EPHB3-201ENST00000330394 ANKRD62A6NC57 917 aa15.91■□□□□ 0.14
EPHB3-201ENST00000330394 HOXC9P31274 260 aa15.91■□□□□ 0.14
EPHB3-201ENST00000330394 EPC1Q9H2F5 836 aa15.91■□□□□ 0.14
EPHB3-201ENST00000330394 KCNJ14Q9UNX9 436 aa15.91■□□□□ 0.14
EPHB3-201ENST00000330394 PNMA6AP0CW24 399 aaPredicted RBP15.91■□□□□ 0.14
EPHB3-201ENST00000330394 HPDP32754 393 aaPredicted RBP15.91■□□□□ 0.14
EPHB3-201ENST00000330394 ADD1P35611 737 aaKnown RBP15.91■□□□□ 0.14
EPHB3-201ENST00000330394 MIGA1Q8NAN2 632 aa15.91■□□□□ 0.14
EPHB3-201ENST00000330394 KCNF1Q9H3M0 494 aa15.91■□□□□ 0.14
EPHB3-201ENST00000330394 TAB2Q9NYJ8 693 aa15.91■□□□□ 0.14
EPHB3-201ENST00000330394 hCG_1642624A0A1W2PR95 340 aa15.9■□□□□ 0.14
EPHB3-201ENST00000330394 GOLGA6CA6NDK9 693 aa15.9■□□□□ 0.14
EPHB3-201ENST00000330394 GOLGA6DP0CG33 693 aa15.9■□□□□ 0.14
EPHB3-201ENST00000330394 MCM7P33993 719 aa15.9■□□□□ 0.14
EPHB3-201ENST00000330394 KRT83P78385 493 aa15.9■□□□□ 0.14
EPHB3-201ENST00000330394 IFNL2Q8IZJ0 200 aa15.9■□□□□ 0.14
EPHB3-201ENST00000330394 CCDC114Q96M63 670 aa15.9■□□□□ 0.14
EPHB3-201ENST00000330394 GOLGA6AQ9NYA3 693 aa15.9■□□□□ 0.14
EPHB3-201ENST00000330394 CTNND2Q9UQB3 1225 aa15.9■□□□□ 0.14
EPHB3-201ENST00000330394 SLC4A4Q9Y6R1 1079 aa15.9■□□□□ 0.14
EPHB3-201ENST00000330394 SEPT7Q16181 437 aaKnown RBP15.9■□□□□ 0.14
EPHB3-201ENST00000330394 TSPY2A6NKD2 308 aa15.9■□□□□ 0.14
EPHB3-201ENST00000330394 STARD3NLO95772 234 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms