RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CRAMP1Q96RY5 1269 aa24.03■■□□□ 1.44
RIPPLY3-201ENST00000329553 BRIP1Q9BX63 1249 aa24.03■■□□□ 1.44
RIPPLY3-201ENST00000329553 ZNF213O14771 459 aa24.02■■□□□ 1.44
RIPPLY3-201ENST00000329553 BAG4O95429 457 aaKnown RBP24.02■■□□□ 1.44
RIPPLY3-201ENST00000329553 CYP7A1P22680 504 aa24.02■■□□□ 1.44
RIPPLY3-201ENST00000329553 PATL2C9JE40 543 aaKnown RBP24.02■■□□□ 1.44
RIPPLY3-201ENST00000329553 GOLGA6L22H0YM25 854 aa24.02■■□□□ 1.44
RIPPLY3-201ENST00000329553 MSL1Q68DK7 614 aa24.02■■□□□ 1.44
RIPPLY3-201ENST00000329553 NSFL1CQ9UNZ2 370 aaKnown RBP24.02■■□□□ 1.44
RIPPLY3-201ENST00000329553 ADGRA1Q86SQ6 560 aa24.01■■□□□ 1.43
RIPPLY3-201ENST00000329553 MIGA1Q8NAN2 632 aa24.01■■□□□ 1.43
RIPPLY3-201ENST00000329553 PDS5AQ29RF7 1337 aaKnown RBP24.01■■□□□ 1.43
RIPPLY3-201ENST00000329553 ANKRD31Q8N7Z5 1873 aa24.01■■□□□ 1.43
RIPPLY3-201ENST00000329553 LCORLQ8N3X6 602 aa24■■□□□ 1.43
RIPPLY3-201ENST00000329553 DTNBO60941 627 aa24■■□□□ 1.43
RIPPLY3-201ENST00000329553 ALX1Q15699 326 aa24■■□□□ 1.43
RIPPLY3-201ENST00000329553 GAS2L3Q86XJ1 694 aa24■■□□□ 1.43
RIPPLY3-201ENST00000329553 GPR101Q96P66 508 aaPredicted RBP24■■□□□ 1.43
RIPPLY3-201ENST00000329553 SMC3Q9UQE7 1217 aa24■■□□□ 1.43
RIPPLY3-201ENST00000329553 PARP3Q9Y6F1 533 aa24■■□□□ 1.43
RIPPLY3-201ENST00000329553 NRXN2Q9P2S2 1712 aa24■■□□□ 1.43
RIPPLY3-201ENST00000329553 BRD1O95696 1058 aa23.99■■□□□ 1.43
RIPPLY3-201ENST00000329553 CHAF1AQ13111 956 aaPredicted RBP23.99■■□□□ 1.43
RIPPLY3-201ENST00000329553 IFNL3Q8IZI9 196 aa23.99■■□□□ 1.43
RIPPLY3-201ENST00000329553 ZNF384Q8TF68 577 aa23.99■■□□□ 1.43
RIPPLY3-201ENST00000329553 BRF1Q92994 677 aa23.99■■□□□ 1.43
RIPPLY3-201ENST00000329553 NBPF3Q9H094 633 aa23.99■■□□□ 1.43
RIPPLY3-201ENST00000329553 EPB41L4AQ9HCS5 686 aaPredicted RBP23.99■■□□□ 1.43
RIPPLY3-201ENST00000329553 PRKAB2O43741 272 aa23.99■■□□□ 1.43
RIPPLY3-201ENST00000329553 SLC15A2Q16348 729 aa23.99■■□□□ 1.43
RIPPLY3-201ENST00000329553 CHST3Q7LGC8 479 aa23.99■■□□□ 1.43
RIPPLY3-201ENST00000329553 MYH13Q9UKX3 1938 aa23.99■■□□□ 1.43
RIPPLY3-201ENST00000329553 GSG1L2A8MUP6 293 aa23.98■■□□□ 1.43
RIPPLY3-201ENST00000329553 ZBTB22O15209 634 aa23.98■■□□□ 1.43
RIPPLY3-201ENST00000329553 FGD1P98174 961 aa23.98■■□□□ 1.43
RIPPLY3-201ENST00000329553 FOXD4L5Q5VV16 416 aaPredicted RBP23.98■■□□□ 1.43
RIPPLY3-201ENST00000329553 FOXD4L4Q8WXT5 416 aaPredicted RBP23.98■■□□□ 1.43
RIPPLY3-201ENST00000329553 CACNA1SQ13698 1873 aa23.98■■□□□ 1.43
RIPPLY3-201ENST00000329553 SRGNP10124 158 aa23.98■■□□□ 1.43
RIPPLY3-201ENST00000329553 STK3Q13188 491 aa23.98■■□□□ 1.43
RIPPLY3-201ENST00000329553 KLHL40Q2TBA0 621 aa23.98■■□□□ 1.43
RIPPLY3-201ENST00000329553 C15orf52Q6ZUT6 534 aaKnown RBP23.98■■□□□ 1.43
RIPPLY3-201ENST00000329553 AGXT2Q9BYV1 514 aa23.98■■□□□ 1.43
RIPPLY3-201ENST00000329553 ATP2B4P23634 1241 aa23.97■■□□□ 1.43
RIPPLY3-201ENST00000329553 JAG2Q9Y219 1238 aa23.97■■□□□ 1.43
RIPPLY3-201ENST00000329553 SLC4A4Q9Y6R1 1079 aa23.97■■□□□ 1.43
RIPPLY3-201ENST00000329553 UFL1O94874 794 aa23.96■■□□□ 1.43
RIPPLY3-201ENST00000329553 GNAT2P19087 354 aa23.96■■□□□ 1.43
RIPPLY3-201ENST00000329553 NAA16Q6N069 864 aaPredicted RBP23.96■■□□□ 1.43
RIPPLY3-201ENST00000329553 GGA1Q9UJY5 639 aa23.96■■□□□ 1.43
RIPPLY3-201ENST00000329553 GJB2P29033 226 aa23.96■■□□□ 1.43
RIPPLY3-201ENST00000329553 TDRD7Q8NHU6 1098 aaKnown RBP23.96■■□□□ 1.43
RIPPLY3-201ENST00000329553 NCOA7Q8NI08 942 aa23.96■■□□□ 1.43
RIPPLY3-201ENST00000329553 NSUN4Q96CB9 384 aaKnown RBP23.96■■□□□ 1.43
RIPPLY3-201ENST00000329553 NAPBQ9H115 298 aa23.96■■□□□ 1.43
RIPPLY3-201ENST00000329553 ZMYM6O95789 1325 aa23.95■■□□□ 1.43
RIPPLY3-201ENST00000329553 MAGEB6P1A0A0J9YX57 407 aa23.95■■□□□ 1.42
RIPPLY3-201ENST00000329553 TBC1D10CQ8IV04 446 aa23.95■■□□□ 1.42
RIPPLY3-201ENST00000329553 MB21D2Q8IYB1 491 aaPredicted RBP23.95■■□□□ 1.42
RIPPLY3-201ENST00000329553 PODXL2Q9NZ53 605 aa23.95■■□□□ 1.42
RIPPLY3-201ENST00000329553 RIOK1Q9BRS2 568 aaKnown RBP23.95■■□□□ 1.42
RIPPLY3-201ENST00000329553 POLLQ9UGP5 575 aa23.95■■□□□ 1.42
RIPPLY3-201ENST00000329553 PPEF1O14829 653 aaPredicted RBP23.94■■□□□ 1.42
RIPPLY3-201ENST00000329553 PRDX5P30044 214 aa23.94■■□□□ 1.42
RIPPLY3-201ENST00000329553 PDE6BP35913 854 aa23.94■■□□□ 1.42
RIPPLY3-201ENST00000329553 MECOMQ03112 1051 aa23.94■■□□□ 1.42
RIPPLY3-201ENST00000329553 ZNF804AQ7Z570 1209 aa23.94■■□□□ 1.42
RIPPLY3-201ENST00000329553 SP8Q8IXZ3 490 aa23.94■■□□□ 1.42
RIPPLY3-201ENST00000329553 STK32BQ9NY57 414 aa23.94■■□□□ 1.42
RIPPLY3-201ENST00000329553 NPR1P16066 1061 aa23.94■■□□□ 1.42
RIPPLY3-201ENST00000329553 SYT1P21579 422 aa23.94■■□□□ 1.42
RIPPLY3-201ENST00000329553 APOBRQ0VD83 1088 aa23.94■■□□□ 1.42
RIPPLY3-201ENST00000329553 TMC4Q7Z404 712 aa23.94■■□□□ 1.42
RIPPLY3-201ENST00000329553 TBC1D16Q8TBP0 767 aa23.94■■□□□ 1.42
RIPPLY3-201ENST00000329553 FBXL16Q8N461 479 aa23.93■■□□□ 1.42
RIPPLY3-201ENST00000329553 GTF3C6Q969F1 213 aa23.93■■□□□ 1.42
RIPPLY3-201ENST00000329553 MCM5P33992 734 aa23.92■■□□□ 1.42
RIPPLY3-201ENST00000329553 DYNLL1P63167 89 aaKnown RBP23.92■■□□□ 1.42
RIPPLY3-201ENST00000329553 RALYLQ86SE5 291 aaKnown RBP23.92■■□□□ 1.42
RIPPLY3-201ENST00000329553 NKX2-3Q8TAU0 364 aa23.92■■□□□ 1.42
RIPPLY3-201ENST00000329553 NACAP1Q9BZK3 213 aa23.92■■□□□ 1.42
RIPPLY3-201ENST00000329553 GPHNQ9NQX3 736 aaPredicted RBP23.92■■□□□ 1.42
RIPPLY3-201ENST00000329553 WDR33Q9C0J8 1336 aaKnown RBP23.92■■□□□ 1.42
RIPPLY3-201ENST00000329553 PRC1O43663 620 aa23.92■■□□□ 1.42
RIPPLY3-201ENST00000329553 ANTXR2P58335 489 aa23.92■■□□□ 1.42
RIPPLY3-201ENST00000329553 CHAMP1Q96JM3 812 aa23.92■■□□□ 1.42
RIPPLY3-201ENST00000329553 ATP6V0A2Q9Y487 856 aa23.92■■□□□ 1.42
RIPPLY3-201ENST00000329553 DDX49Q9Y6V7 483 aaKnown RBP23.92■■□□□ 1.42
RIPPLY3-201ENST00000329553 TRDNQ13061 729 aa23.91■■□□□ 1.42
RIPPLY3-201ENST00000329553 SDR42E1Q8WUS8 393 aa23.91■■□□□ 1.42
RIPPLY3-201ENST00000329553 CD209Q9NNX6 404 aa23.91■■□□□ 1.42
RIPPLY3-201ENST00000329553 STX6O43752 255 aa23.91■■□□□ 1.42
RIPPLY3-201ENST00000329553 TDO2P48775 406 aa23.91■■□□□ 1.42
RIPPLY3-201ENST00000329553 CTDSPL2Q05D32 466 aa23.91■■□□□ 1.42
RIPPLY3-201ENST00000329553 MCTP1Q6DN14 999 aa23.91■■□□□ 1.42
RIPPLY3-201ENST00000329553 WDR66Q8TBY9 1149 aa23.91■■□□□ 1.42
RIPPLY3-201ENST00000329553 INCENPQ9NQS7 918 aa23.91■■□□□ 1.42
RIPPLY3-201ENST00000329553 PFKFB2O60825 505 aa23.9■■□□□ 1.42
RIPPLY3-201ENST00000329553 ALDH1B1P30837 517 aa23.9■■□□□ 1.42
RIPPLY3-201ENST00000329553 SCRN1Q12765 414 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms