RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 CCDC65Q8IXS2 484 aa17.37■□□□□ 0.37
PTPN21-201ENST00000328736 TRERF1Q96PN7 1200 aa17.37■□□□□ 0.37
PTPN21-201ENST00000328736 TRIM7Q9C029 511 aa17.37■□□□□ 0.37
PTPN21-201ENST00000328736 WWC3Q9ULE0 1092 aa17.37■□□□□ 0.37
PTPN21-201ENST00000328736 TNRQ92752 1358 aa17.37■□□□□ 0.37
PTPN21-201ENST00000328736 CWF19L2Q2TBE0 894 aaKnown RBP17.37■□□□□ 0.37
PTPN21-201ENST00000328736 CCDC110Q8TBZ0 833 aa17.37■□□□□ 0.37
PTPN21-201ENST00000328736 PARP1P09874 1014 aaKnown RBP17.37■□□□□ 0.37
PTPN21-201ENST00000328736 TNNC1P63316 161 aa17.37■□□□□ 0.37
PTPN21-201ENST00000328736 MAGEB6Q8N7X4 407 aa17.37■□□□□ 0.37
PTPN21-201ENST00000328736 SIRT1Q96EB6 747 aa17.37■□□□□ 0.37
PTPN21-201ENST00000328736 CCDC121Q6ZUS5 278 aa17.37■□□□□ 0.37
PTPN21-201ENST00000328736 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.37■□□□□ 0.37
PTPN21-201ENST00000328736 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
PTPN21-201ENST00000328736 F13A1P00488 732 aa17.36■□□□□ 0.37
PTPN21-201ENST00000328736 MCM7P33993 719 aa17.36■□□□□ 0.37
PTPN21-201ENST00000328736 BRAPQ7Z569 592 aa17.36■□□□□ 0.37
PTPN21-201ENST00000328736 TTC6Q86TZ1 520 aa17.36■□□□□ 0.37
PTPN21-201ENST00000328736 CCDC114Q96M63 670 aa17.36■□□□□ 0.37
PTPN21-201ENST00000328736 CCDC160A6NGH7 325 aa17.36■□□□□ 0.37
PTPN21-201ENST00000328736 BIN2Q9UBW5 565 aaPredicted RBP17.36■□□□□ 0.37
PTPN21-201ENST00000328736 EPB41P11171 864 aaKnown RBP17.36■□□□□ 0.37
PTPN21-201ENST00000328736 MNAT1P51948 309 aa17.36■□□□□ 0.37
PTPN21-201ENST00000328736 BRDTQ58F21 947 aaPredicted RBP17.36■□□□□ 0.37
PTPN21-201ENST00000328736 ZFP91Q96JP5 570 aaPredicted RBP17.36■□□□□ 0.37
PTPN21-201ENST00000328736 TFCP2L1Q9NZI6 479 aa17.36■□□□□ 0.37
PTPN21-201ENST00000328736 CALCOCO2Q13137 446 aa17.35■□□□□ 0.37
PTPN21-201ENST00000328736 CRCPO75575 148 aa17.35■□□□□ 0.37
PTPN21-201ENST00000328736 FNBP1Q96RU3 617 aa17.35■□□□□ 0.37
PTPN21-201ENST00000328736 JAG2Q9Y219 1238 aa17.35■□□□□ 0.37
PTPN21-201ENST00000328736 STX10O60499 249 aa17.35■□□□□ 0.37
PTPN21-201ENST00000328736 GABPB2Q8TAK5 448 aaPredicted RBP17.35■□□□□ 0.37
PTPN21-201ENST00000328736 IL2RBP14784 551 aa17.35■□□□□ 0.37
PTPN21-201ENST00000328736 ATP5DP30049 168 aa17.35■□□□□ 0.37
PTPN21-201ENST00000328736 DNM1Q05193 864 aaKnown RBP17.35■□□□□ 0.37
PTPN21-201ENST00000328736 AKNAD1Q5T1N1 836 aa17.35■□□□□ 0.37
PTPN21-201ENST00000328736 TMOD4Q9NZQ9 345 aa17.35■□□□□ 0.37
PTPN21-201ENST00000328736 STK24Q9Y6E0 443 aa17.35■□□□□ 0.37
PTPN21-201ENST00000328736 WDR7Q9Y4E6 1490 aa17.35■□□□□ 0.37
PTPN21-201ENST00000328736 SEC24BO95487 1268 aa17.34■□□□□ 0.37
PTPN21-201ENST00000328736 SETDB1Q15047 1291 aa17.34■□□□□ 0.37
PTPN21-201ENST00000328736 UBAP1LF5GYI3 381 aa17.34■□□□□ 0.37
PTPN21-201ENST00000328736 INF2Q27J81 1249 aa17.34■□□□□ 0.37
PTPN21-201ENST00000328736 SV2BQ7L1I2 683 aa17.34■□□□□ 0.37
PTPN21-201ENST00000328736 IRS4O14654 1257 aaPredicted RBP17.34■□□□□ 0.37
PTPN21-201ENST00000328736 C8orf37Q96NL8 207 aa17.34■□□□□ 0.37
PTPN21-201ENST00000328736 UGGT2Q9NYU1 1516 aa17.34■□□□□ 0.37
PTPN21-201ENST00000328736 ARFGAP2Q8N6H7 521 aa17.34■□□□□ 0.37
PTPN21-201ENST00000328736 IPO4Q8TEX9 1081 aaKnown RBP17.34■□□□□ 0.37
PTPN21-201ENST00000328736 KRT5P13647 590 aa17.34■□□□□ 0.37
PTPN21-201ENST00000328736 RXRAP19793 462 aa17.34■□□□□ 0.37
PTPN21-201ENST00000328736 SMTNP53814 917 aa17.34■□□□□ 0.37
PTPN21-201ENST00000328736 ANKRD44Q8N8A2 993 aa17.34■□□□□ 0.37
PTPN21-201ENST00000328736 HELBQ8NG08 1087 aaPredicted RBP17.34■□□□□ 0.37
PTPN21-201ENST00000328736 TERF1P54274 439 aa17.33■□□□□ 0.37
PTPN21-201ENST00000328736 VWA3BQ502W6 1294 aa17.33■□□□□ 0.37
PTPN21-201ENST00000328736 GPR161Q8N6U8 529 aaKnown RBP17.33■□□□□ 0.37
PTPN21-201ENST00000328736 GPATCH11Q8N954 259 aa17.33■□□□□ 0.37
PTPN21-201ENST00000328736 IQUBQ8NA54 791 aa17.33■□□□□ 0.37
PTPN21-201ENST00000328736 PHACTR3Q96KR7 559 aa17.33■□□□□ 0.37
PTPN21-201ENST00000328736 DACT1Q9NYF0 836 aa17.33■□□□□ 0.37
PTPN21-201ENST00000328736 POLKQ9UBT6 870 aa17.33■□□□□ 0.37
PTPN21-201ENST00000328736 DENND2AQ9ULE3 1009 aa17.33■□□□□ 0.37
PTPN21-201ENST00000328736 AGTPBP1Q9UPW5 1226 aa17.33■□□□□ 0.37
PTPN21-201ENST00000328736 DNAJC25Q9H1X3 360 aa17.33■□□□□ 0.37
PTPN21-201ENST00000328736 PRAG1Q86YV5 1406 aa17.33■□□□□ 0.36
PTPN21-201ENST00000328736 DKC1O60832 514 aaKnown RBP eCLIP17.33■□□□□ 0.36
PTPN21-201ENST00000328736 FAM204AQ9H8W3 233 aa17.33■□□□□ 0.36
PTPN21-201ENST00000328736 PICK1Q9NRD5 415 aa17.33■□□□□ 0.36
PTPN21-201ENST00000328736 NSFL1CQ9UNZ2 370 aaKnown RBP17.33■□□□□ 0.36
PTPN21-201ENST00000328736 RIMBP2O15034 1052 aa17.33■□□□□ 0.36
PTPN21-201ENST00000328736 KIFC2Q96AC6 838 aa17.33■□□□□ 0.36
PTPN21-201ENST00000328736 VAV2P52735 878 aa17.33■□□□□ 0.36
PTPN21-201ENST00000328736 KCNK9Q9NPC2 374 aa17.33■□□□□ 0.36
PTPN21-201ENST00000328736 NOD1Q9Y239 953 aa17.33■□□□□ 0.36
PTPN21-201ENST00000328736 MCM6Q14566 821 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 DCAF17Q5H9S7 520 aaPredicted RBP17.32■□□□□ 0.36
PTPN21-201ENST00000328736 CCDC186Q7Z3E2 898 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 ZNF710Q8N1W2 664 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 NFATC2IPQ8NCF5 419 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 SEC62Q99442 399 aaKnown RBP17.32■□□□□ 0.36
PTPN21-201ENST00000328736 SAMD15Q9P1V8 674 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 RNF34Q969K3 372 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 CCDC26Q8TAB7 109 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 CAPZA3Q96KX2 299 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 HAUS7Q99871 368 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 STIM2Q9P246 746 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 EXOC7Q9UPT5 735 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 E7EVH7 732 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 STK10O94804 968 aaKnown RBP17.32■□□□□ 0.36
PTPN21-201ENST00000328736 RAPGEF1Q13905 1077 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 ERCC6LQ2NKX8 1250 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 RSPH14Q9UHP6 348 aa17.32■□□□□ 0.36
PTPN21-201ENST00000328736 DTNBO60941 627 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 TFCP2Q12800 502 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 BIRC3Q13489 604 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 MIGA1Q8NAN2 632 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 RAD50Q92878 1312 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 TUBBP07437 444 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 PLCD1P51178 756 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms