RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 UTP4Q969X6 686 aaKnown RBP6.64□□□□□ -1.35
SKP1-201ENST00000328392 TRIM56Q9BRZ2 755 aaKnown RBP6.64□□□□□ -1.35
SKP1-201ENST00000328392 TMPRSS13Q9BYE2 586 aa6.64□□□□□ -1.35
SKP1-201ENST00000328392 RAXQ9Y2V3 346 aa6.64□□□□□ -1.35
SKP1-201ENST00000328392 MEGF11A6BM72 1044 aa6.63□□□□□ -1.35
SKP1-201ENST00000328392 DRD2P14416 443 aa6.63□□□□□ -1.35
SKP1-201ENST00000328392 FSTP19883 344 aa6.63□□□□□ -1.35
SKP1-201ENST00000328392 MAOBP27338 520 aa6.63□□□□□ -1.35
SKP1-201ENST00000328392 ZNF157P51786 506 aaPredicted RBP6.63□□□□□ -1.35
SKP1-201ENST00000328392 FAAP100Q0VG06 881 aa6.63□□□□□ -1.35
SKP1-201ENST00000328392 ENOX2Q16206 610 aaKnown RBP6.63□□□□□ -1.35
SKP1-201ENST00000328392 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.63□□□□□ -1.35
SKP1-201ENST00000328392 EAPPQ56P03 285 aaPredicted RBP6.63□□□□□ -1.35
SKP1-201ENST00000328392 WWC3Q9ULE0 1092 aa6.63□□□□□ -1.35
SKP1-201ENST00000328392 DHX15O43143 795 aaKnown RBP6.62□□□□□ -1.35
SKP1-201ENST00000328392 SART1O43290 800 aaKnown RBP6.62□□□□□ -1.35
SKP1-201ENST00000328392 B3GALT4O96024 378 aa6.62□□□□□ -1.35
SKP1-201ENST00000328392 FCGRTP55899 365 aa6.62□□□□□ -1.35
SKP1-201ENST00000328392 NUTM2GQ5VZR2 741 aa6.62□□□□□ -1.35
SKP1-201ENST00000328392 ANKRD34AQ69YU3 496 aa6.62□□□□□ -1.35
SKP1-201ENST00000328392 FDX2Q6P4F2 183 aa6.62□□□□□ -1.35
SKP1-201ENST00000328392 C12orf50Q8NA57 414 aaPredicted RBP6.62□□□□□ -1.35
SKP1-201ENST00000328392 MYRFLQ96LU7 910 aa6.62□□□□□ -1.35
SKP1-201ENST00000328392 BCO2Q9BYV7 579 aa6.62□□□□□ -1.35
SKP1-201ENST00000328392 STOML1Q9UBI4 398 aa6.62□□□□□ -1.35
SKP1-201ENST00000328392 HMX2A2RU54 273 aa6.61□□□□□ -1.35
SKP1-201ENST00000328392 UNCXA6NJT0 531 aa6.61□□□□□ -1.35
SKP1-201ENST00000328392 BMP3P12645 472 aa6.61□□□□□ -1.35
SKP1-201ENST00000328392 ZNF16P17020 682 aaPredicted RBP6.61□□□□□ -1.35
SKP1-201ENST00000328392 ERCC3P19447 782 aa6.61□□□□□ -1.35
SKP1-201ENST00000328392 POU4F3Q15319 338 aa6.61□□□□□ -1.35
SKP1-201ENST00000328392 EXOSC6Q5RKV6 272 aaKnown RBP6.61□□□□□ -1.35
SKP1-201ENST00000328392 NXPE4Q6UWF7 544 aa6.61□□□□□ -1.35
SKP1-201ENST00000328392 TRIM42Q8IWZ5 723 aa6.61□□□□□ -1.35
SKP1-201ENST00000328392 FAM20CQ8IXL6 584 aa6.61□□□□□ -1.35
SKP1-201ENST00000328392 SMG8Q8ND04 991 aaKnown RBP6.61□□□□□ -1.35
SKP1-201ENST00000328392 RNF19AQ9NV58 838 aa6.61□□□□□ -1.35
SKP1-201ENST00000328392 NLRP2Q9NX02 1062 aa6.61□□□□□ -1.35
SKP1-201ENST00000328392 TIAF1O95411 115 aa6.6□□□□□ -1.35
SKP1-201ENST00000328392 LDHBP07195 334 aaKnown RBP6.6□□□□□ -1.35
SKP1-201ENST00000328392 FMR1Q06787 632 aaKnown RBP eCLIP6.6□□□□□ -1.35
SKP1-201ENST00000328392 UVSSAQ2YD98 709 aa6.6□□□□□ -1.35
SKP1-201ENST00000328392 SGO2Q562F6 1265 aa6.6□□□□□ -1.35
SKP1-201ENST00000328392 XP32Q5T750 250 aa6.6□□□□□ -1.35
SKP1-201ENST00000328392 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.6□□□□□ -1.35
SKP1-201ENST00000328392 FAM161BQ96MY7 647 aa6.6□□□□□ -1.35
SKP1-201ENST00000328392 C7orf69Q9H7B7 122 aa6.6□□□□□ -1.35
SKP1-201ENST00000328392 SUGCTQ9HAC7 445 aa6.6□□□□□ -1.35
SKP1-201ENST00000328392 TRAK1Q9UPV9 953 aa6.6□□□□□ -1.35
SKP1-201ENST00000328392 RANGAP1P46060 587 aaPredicted RBP6.59□□□□□ -1.35
SKP1-201ENST00000328392 PTPN12Q05209 780 aaKnown RBP6.59□□□□□ -1.35
SKP1-201ENST00000328392 ZNF326Q5BKZ1 582 aaKnown RBP6.59□□□□□ -1.35
SKP1-201ENST00000328392 DTHD1Q6ZMT9 781 aa6.59□□□□□ -1.35
SKP1-201ENST00000328392 FBXO33Q7Z6M2 555 aa6.59□□□□□ -1.35
SKP1-201ENST00000328392 KCNF1Q9H3M0 494 aa6.59□□□□□ -1.35
SKP1-201ENST00000328392 CYP4F12Q9HCS2 524 aa6.59□□□□□ -1.35
SKP1-201ENST00000328392 SCO2A0A1W2PP80 73 aa6.58□□□□□ -1.36
SKP1-201ENST00000328392 RBM47A0AV96 593 aaKnown RBP6.58□□□□□ -1.36
SKP1-201ENST00000328392 GAS2O43903 313 aaKnown RBP6.58□□□□□ -1.36
SKP1-201ENST00000328392 IGLV1-40P01703 118 aa6.58□□□□□ -1.36
SKP1-201ENST00000328392 CYP11A1P05108 521 aa6.58□□□□□ -1.36
SKP1-201ENST00000328392 BEND4Q6ZU67 534 aa6.58□□□□□ -1.36
SKP1-201ENST00000328392 CLEC10AQ8IUN9 316 aa6.58□□□□□ -1.36
SKP1-201ENST00000328392 C2CD4AQ8NCU7 369 aaPredicted RBP6.58□□□□□ -1.36
SKP1-201ENST00000328392 MAP4P27816 1152 aaKnown RBP6.57□□□□□ -1.36
SKP1-201ENST00000328392 ATP2B2Q01814 1243 aa6.57□□□□□ -1.36
SKP1-201ENST00000328392 SOX4Q06945 474 aaPredicted RBP6.57□□□□□ -1.36
SKP1-201ENST00000328392 RPS26P11Q5JNZ5 115 aaPredicted RBP6.57□□□□□ -1.36
SKP1-201ENST00000328392 CDPF1Q6NVV7 123 aa6.57□□□□□ -1.36
SKP1-201ENST00000328392 MRRFQ96E11 262 aaKnown RBP6.57□□□□□ -1.36
SKP1-201ENST00000328392 DUSP9Q99956 384 aaKnown RBP6.57□□□□□ -1.36
SKP1-201ENST00000328392 FAM83CQ9BQN1 747 aa6.57□□□□□ -1.36
SKP1-201ENST00000328392 CORO1BQ9BR76 489 aa6.57□□□□□ -1.36
SKP1-201ENST00000328392 OSBPL7Q9BZF2 842 aa6.57□□□□□ -1.36
SKP1-201ENST00000328392 ZC3H12CQ9C0D7 883 aaKnown RBP6.57□□□□□ -1.36
SKP1-201ENST00000328392 AKAP2Q9Y2D5 859 aa6.57□□□□□ -1.36
SKP1-201ENST00000328392 E9PSI1 815 aa6.56□□□□□ -1.36
SKP1-201ENST00000328392 ADH5P11766 374 aa6.56□□□□□ -1.36
SKP1-201ENST00000328392 NFIAQ12857 509 aa6.56□□□□□ -1.36
SKP1-201ENST00000328392 AKAP4Q5JQC9 854 aa6.56□□□□□ -1.36
SKP1-201ENST00000328392 ARTNQ5T4W7 220 aa6.56□□□□□ -1.36
SKP1-201ENST00000328392 RNF43Q68DV7 783 aa6.56□□□□□ -1.36
SKP1-201ENST00000328392 SHISA5Q8N114 240 aa6.56□□□□□ -1.36
SKP1-201ENST00000328392 C3orf58Q8NDZ4 430 aa6.56□□□□□ -1.36
SKP1-201ENST00000328392 DDX54Q8TDD1 881 aaKnown RBP6.56□□□□□ -1.36
SKP1-201ENST00000328392 STK35Q8TDR2 534 aa6.56□□□□□ -1.36
SKP1-201ENST00000328392 FBLIM1Q8WUP2 373 aa6.56□□□□□ -1.36
SKP1-201ENST00000328392 WDR89Q96FK6 387 aaPredicted RBP6.56□□□□□ -1.36
SKP1-201ENST00000328392 PPP4R2Q9NY27 417 aa6.56□□□□□ -1.36
SKP1-201ENST00000328392 RNF112Q9ULX5 631 aa6.56□□□□□ -1.36
SKP1-201ENST00000328392 HYAL3O43820 417 aaPredicted RBP6.55□□□□□ -1.36
SKP1-201ENST00000328392 LIG1P18858 919 aa6.55□□□□□ -1.36
SKP1-201ENST00000328392 RXRBP28702 533 aa6.55□□□□□ -1.36
SKP1-201ENST00000328392 USP11P51784 963 aa6.55□□□□□ -1.36
SKP1-201ENST00000328392 XPCQ01831 940 aaPredicted RBP6.55□□□□□ -1.36
SKP1-201ENST00000328392 PDE3AQ14432 1141 aa6.55□□□□□ -1.36
SKP1-201ENST00000328392 CCDC86Q9H6F5 360 aaKnown RBP6.55□□□□□ -1.36
SKP1-201ENST00000328392 RAD18Q9NS91 495 aa6.55□□□□□ -1.36
SKP1-201ENST00000328392 PARP2Q9UGN5 583 aa6.55□□□□□ -1.36
SKP1-201ENST00000328392 GPN3Q9UHW5 284 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms