RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 AMIGO3Q86WK7 504 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 CLIC6Q96NY7 704 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 ALG1Q9BT22 464 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 GOLPH3LQ9H4A5 285 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 CCDC69A6NI79 296 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 FDPSP14324 419 aaKnown RBP12.44□□□□□ -0.42
CUL4A-201ENST00000326335 PTGS1P23219 599 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 ADD2P35612 726 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 LRRFIP1Q32MZ4 808 aaKnown RBP12.44□□□□□ -0.42
CUL4A-201ENST00000326335 TBC1D9BQ66K14 1250 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 AATFQ9NY61 560 aaKnown RBP eCLIP12.44□□□□□ -0.421e-6■□□□□ 9.7
CUL4A-201ENST00000326335 ANKIB1Q9P2G1 1089 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 PALLDQ8WX93 1383 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 PFKFB2O60825 505 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 CSF1RP07333 972 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 CDC27P30260 824 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 IL6STP40189 918 aaPredicted RBP12.44□□□□□ -0.42
CUL4A-201ENST00000326335 RESTQ13127 1097 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 LINC00116Q8NCU8 138 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 LPIN2Q92539 896 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 MRVI1Q9Y6F6 885 aa12.44□□□□□ -0.42
CUL4A-201ENST00000326335 PCNTO95613 3336 aa12.43□□□□□ -0.42
CUL4A-201ENST00000326335 GOLGA6L19H0YKK7 550 aa12.43□□□□□ -0.42
CUL4A-201ENST00000326335 ZPR1O75312 459 aa12.43□□□□□ -0.42
CUL4A-201ENST00000326335 CIAO1O76071 339 aa12.43□□□□□ -0.42
CUL4A-201ENST00000326335 FAM47AQ5JRC9 791 aa12.43□□□□□ -0.42
CUL4A-201ENST00000326335 ADGRA1Q86SQ6 560 aa12.43□□□□□ -0.42
CUL4A-201ENST00000326335 ANKRD18AQ8IVF6 992 aa12.43□□□□□ -0.42
CUL4A-201ENST00000326335 PPP1R9BQ96SB3 815 aa12.43□□□□□ -0.42
CUL4A-201ENST00000326335 ZSWIM5Q9P217 1185 aa12.43□□□□□ -0.42
CUL4A-201ENST00000326335 KIF28PB7ZC32 967 aa12.43□□□□□ -0.42
CUL4A-201ENST00000326335 ARID5BQ14865 1188 aa12.43□□□□□ -0.42
CUL4A-201ENST00000326335 SLC12A7Q9Y666 1083 aa12.43□□□□□ -0.42
CUL4A-201ENST00000326335 F8W031 263 aaPredicted RBP12.42□□□□□ -0.42
CUL4A-201ENST00000326335 NMT2O60551 498 aa12.42□□□□□ -0.42
CUL4A-201ENST00000326335 HMGB1P09429 215 aaKnown RBP12.42□□□□□ -0.42
CUL4A-201ENST00000326335 EIF5P55010 431 aaKnown RBP12.42□□□□□ -0.42
CUL4A-201ENST00000326335 CBX8Q9HC52 389 aa12.42□□□□□ -0.42
CUL4A-201ENST00000326335 CCDC39Q9UFE4 941 aa12.42□□□□□ -0.42
CUL4A-201ENST00000326335 KIF1AQ12756 1690 aa12.42□□□□□ -0.42
CUL4A-201ENST00000326335 GUCY1A2P33402 732 aa12.42□□□□□ -0.42
CUL4A-201ENST00000326335 MFSD6Q6ZSS7 791 aa12.42□□□□□ -0.42
CUL4A-201ENST00000326335 IFNL3Q8IZI9 196 aa12.42□□□□□ -0.42
CUL4A-201ENST00000326335 CFAP45Q9UL16 551 aa12.42□□□□□ -0.42
CUL4A-201ENST00000326335 PHRF1Q9P1Y6 1649 aaKnown RBP12.42□□□□□ -0.42
CUL4A-201ENST00000326335 DCCP43146 1447 aa12.42□□□□□ -0.42
CUL4A-201ENST00000326335 ZBTB43O43298 467 aa12.42□□□□□ -0.42
CUL4A-201ENST00000326335 EXOSC10Q01780 885 aaKnown RBP12.42□□□□□ -0.42
CUL4A-201ENST00000326335 C11orf57Q6ZUT1 292 aaPredicted RBP12.42□□□□□ -0.42
CUL4A-201ENST00000326335 EPB41L4AQ9HCS5 686 aaPredicted RBP12.42□□□□□ -0.42
CUL4A-201ENST00000326335 CARMIL3Q8ND23 1372 aa12.42□□□□□ -0.42
CUL4A-201ENST00000326335 CCDC186Q7Z3E2 898 aa12.41□□□□□ -0.42
CUL4A-201ENST00000326335 ZBTB9Q96C00 473 aa12.41□□□□□ -0.42
CUL4A-201ENST00000326335 TRIM29Q14134 588 aa12.41□□□□□ -0.42
CUL4A-201ENST00000326335 KCNB2Q92953 911 aa12.41□□□□□ -0.42
CUL4A-201ENST00000326335 UIMC1Q96RL1 719 aa12.41□□□□□ -0.42
CUL4A-201ENST00000326335 NBPF3Q9H094 633 aa12.41□□□□□ -0.42
CUL4A-201ENST00000326335 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.41□□□□□ -0.42
CUL4A-201ENST00000326335 CCNL1Q9UK58 526 aaPredicted RBP12.41□□□□□ -0.42
CUL4A-201ENST00000326335 ZKSCAN5Q9Y2L8 839 aa12.41□□□□□ -0.42
CUL4A-201ENST00000326335 KIF3AQ9Y496 699 aa12.41□□□□□ -0.42
CUL4A-201ENST00000326335 COBLO75128 1261 aa12.41□□□□□ -0.42
CUL4A-201ENST00000326335 CAMTA2O94983 1202 aa12.41□□□□□ -0.42
CUL4A-201ENST00000326335 TXNRD3Q86VQ6 643 aa12.41□□□□□ -0.42
CUL4A-201ENST00000326335 SETDB2Q96T68 719 aa12.41□□□□□ -0.42
CUL4A-201ENST00000326335 UBAC1Q9BSL1 405 aa12.41□□□□□ -0.42
CUL4A-201ENST00000326335 SPATA31A1Q5TZJ5 1347 aa12.41□□□□□ -0.42
CUL4A-201ENST00000326335 IARSP41252 1262 aaKnown RBP12.4□□□□□ -0.42
CUL4A-201ENST00000326335 NDUFA8P51970 172 aa12.4□□□□□ -0.42
CUL4A-201ENST00000326335 PCDHA7Q9UN72 937 aa12.4□□□□□ -0.42
CUL4A-201ENST00000326335 ANGEL1Q9UNK9 670 aaKnown RBP12.4□□□□□ -0.42
CUL4A-201ENST00000326335 BCL9O00512 1426 aa12.4□□□□□ -0.42
CUL4A-201ENST00000326335 ERICH2A1L162 156 aa12.4□□□□□ -0.42
CUL4A-201ENST00000326335 ZFYP08048 801 aaPredicted RBP12.4□□□□□ -0.42
CUL4A-201ENST00000326335 CYP2D6P10635 497 aa12.4□□□□□ -0.42
CUL4A-201ENST00000326335 PRDX5P30044 214 aa12.4□□□□□ -0.42
CUL4A-201ENST00000326335 ZNF34Q8IZ26 560 aa12.4□□□□□ -0.42
CUL4A-201ENST00000326335 STAMQ92783 540 aa12.4□□□□□ -0.42
CUL4A-201ENST00000326335 STRBPQ96SI9 672 aaKnown RBP12.4□□□□□ -0.42
CUL4A-201ENST00000326335 TRMT1Q9NXH9 659 aaKnown RBP12.4□□□□□ -0.42
CUL4A-201ENST00000326335 NR5A1Q13285 461 aa12.4□□□□□ -0.42
CUL4A-201ENST00000326335 AOPEPQ8N6M6 819 aa12.4□□□□□ -0.42
CUL4A-201ENST00000326335 HMGN5P82970 282 aaKnown RBP12.39□□□□□ -0.43
CUL4A-201ENST00000326335 ZSCAN25Q6NSZ9 544 aa12.39□□□□□ -0.43
CUL4A-201ENST00000326335 KCPQ6ZWJ8 1503 aa12.39□□□□□ -0.43
CUL4A-201ENST00000326335 VSIG10Q8N0Z9 540 aa12.39□□□□□ -0.43
CUL4A-201ENST00000326335 GPR108Q9NPR9 543 aa12.39□□□□□ -0.43
CUL4A-201ENST00000326335 SAP30BPQ9UHR5 308 aaKnown RBP12.39□□□□□ -0.43
CUL4A-201ENST00000326335 PYCARDQ9ULZ3 195 aa12.39□□□□□ -0.43
CUL4A-201ENST00000326335 HPS5Q9UPZ3 1129 aa12.39□□□□□ -0.43
CUL4A-201ENST00000326335 COL18A1P39060 1754 aa12.39□□□□□ -0.43
CUL4A-201ENST00000326335 BTBD18B2RXH4 712 aa12.39□□□□□ -0.43
CUL4A-201ENST00000326335 SMC2O95347 1197 aa12.39□□□□□ -0.43
CUL4A-201ENST00000326335 MB21D2Q8IYB1 491 aaPredicted RBP12.39□□□□□ -0.43
CUL4A-201ENST00000326335 C16orf45Q96MC5 204 aaPredicted RBP12.39□□□□□ -0.43
CUL4A-201ENST00000326335 USP21Q9UK80 565 aa12.39□□□□□ -0.43
CUL4A-201ENST00000326335 TACC3Q9Y6A5 838 aa12.39□□□□□ -0.43
CUL4A-201ENST00000326335 ARFGEF2Q9Y6D5 1785 aa12.39□□□□□ -0.43
CUL4A-201ENST00000326335 EPB41L2O43491 1005 aaKnown RBP12.39□□□□□ -0.43
CUL4A-201ENST00000326335 DIXDC1Q155Q3 683 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms