RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 CYP2D7A0A087X1C5 515 aa15.35■□□□□ 0.05
LIN28A-202ENST00000326279 NRDCO43847 1150 aa15.35■□□□□ 0.05
LIN28A-202ENST00000326279 HMGB1P09429 215 aaKnown RBP15.35■□□□□ 0.05
LIN28A-202ENST00000326279 ZSCAN22P10073 491 aaPredicted RBP15.35■□□□□ 0.05
LIN28A-202ENST00000326279 ALDH1B1P30837 517 aa15.35■□□□□ 0.05
LIN28A-202ENST00000326279 MCAMP43121 646 aa15.35■□□□□ 0.05
LIN28A-202ENST00000326279 CACNB3P54284 484 aa15.35■□□□□ 0.05
LIN28A-202ENST00000326279 ZYXQ15942 572 aaKnown RBP15.34■□□□□ 0.05
LIN28A-202ENST00000326279 GPR162Q16538 588 aa15.34■□□□□ 0.05
LIN28A-202ENST00000326279 USP48Q86UV5 1035 aa15.34■□□□□ 0.05
LIN28A-202ENST00000326279 EYA3Q99504 573 aa15.34■□□□□ 0.05
LIN28A-202ENST00000326279 FAM47AQ5JRC9 791 aa15.34■□□□□ 0.05
LIN28A-202ENST00000326279 ZNF34Q8IZ26 560 aa15.34■□□□□ 0.05
LIN28A-202ENST00000326279 PUS7LQ9H0K6 701 aaKnown RBP15.34■□□□□ 0.05
LIN28A-202ENST00000326279 INCENPQ9NQS7 918 aa15.34■□□□□ 0.05
LIN28A-202ENST00000326279 USP17L12C9JPN9 530 aa15.34■□□□□ 0.05
LIN28A-202ENST00000326279 USP17L21D6R901 530 aa15.34■□□□□ 0.05
LIN28A-202ENST00000326279 PRDX5P30044 214 aa15.34■□□□□ 0.05
LIN28A-202ENST00000326279 HAUS7Q99871 368 aa15.34■□□□□ 0.05
LIN28A-202ENST00000326279 PIK3C2AO00443 1686 aa15.34■□□□□ 0.05
LIN28A-202ENST00000326279 MCM5P33992 734 aa15.33■□□□□ 0.05
LIN28A-202ENST00000326279 CMTR1Q8N1G2 835 aaKnown RBP15.33■□□□□ 0.05
LIN28A-202ENST00000326279 ZNF396Q96N95 335 aaPredicted RBP15.33■□□□□ 0.05
LIN28A-202ENST00000326279 PIH1D3Q9NQM4 214 aaKnown RBP15.33■□□□□ 0.05
LIN28A-202ENST00000326279 ZNF526Q8TF50 670 aaPredicted RBP15.33■□□□□ 0.04
LIN28A-202ENST00000326279 OSBP2Q969R2 916 aa15.33■□□□□ 0.04
LIN28A-202ENST00000326279 SLC26A6Q9BXS9 759 aa15.33■□□□□ 0.04
LIN28A-202ENST00000326279 ZNF408Q9H9D4 720 aa15.33■□□□□ 0.04
LIN28A-202ENST00000326279 TSPY3P0CV98 308 aa15.33■□□□□ 0.04
LIN28A-202ENST00000326279 TSPY8P0CW00 308 aa15.33■□□□□ 0.04
LIN28A-202ENST00000326279 WDR78Q5VTH9 848 aa15.33■□□□□ 0.04
LIN28A-202ENST00000326279 ATG9AQ7Z3C6 839 aa15.33■□□□□ 0.04
LIN28A-202ENST00000326279 CCDC34Q96HJ3 373 aa15.33■□□□□ 0.04
LIN28A-202ENST00000326279 FEZ1Q99689 392 aa15.33■□□□□ 0.04
LIN28A-202ENST00000326279 CLRN2A0PK11 232 aa15.33■□□□□ 0.04
LIN28A-202ENST00000326279 PAXIP1Q6ZW49 1069 aaPredicted RBP15.33■□□□□ 0.04
LIN28A-202ENST00000326279 AOX1Q06278 1338 aa15.32■□□□□ 0.04
LIN28A-202ENST00000326279 PDE4BQ07343 736 aa15.32■□□□□ 0.04
LIN28A-202ENST00000326279 OTUD7BQ6GQQ9 843 aa15.32■□□□□ 0.04
LIN28A-202ENST00000326279 TRIM5Q9C035 493 aa15.32■□□□□ 0.04
LIN28A-202ENST00000326279 BCL9O00512 1426 aa15.32■□□□□ 0.04
LIN28A-202ENST00000326279 XBP1P17861 261 aa15.32■□□□□ 0.04
LIN28A-202ENST00000326279 KLRK1P26718 216 aa15.32■□□□□ 0.04
LIN28A-202ENST00000326279 TPM4P67936 248 aa15.32■□□□□ 0.04
LIN28A-202ENST00000326279 SLC27A3Q5K4L6 730 aa15.32■□□□□ 0.04
LIN28A-202ENST00000326279 GIMAP6Q6P9H5 292 aa15.32■□□□□ 0.04
LIN28A-202ENST00000326279 CTCFLQ8NI51 663 aaPredicted RBP15.32■□□□□ 0.04
LIN28A-202ENST00000326279 CFAP45Q9UL16 551 aa15.32■□□□□ 0.04
LIN28A-202ENST00000326279 FGAP02671 866 aa15.31■□□□□ 0.04
LIN28A-202ENST00000326279 WTAPQ15007 396 aa15.31■□□□□ 0.04
LIN28A-202ENST00000326279 DHX32Q7L7V1 743 aaKnown RBP15.31■□□□□ 0.04
LIN28A-202ENST00000326279 SLF2Q8IX21 1173 aa15.31■□□□□ 0.04
LIN28A-202ENST00000326279 NUP62CLQ9H1M0 184 aa15.31■□□□□ 0.04
LIN28A-202ENST00000326279 JAK2O60674 1132 aa15.31■□□□□ 0.04
LIN28A-202ENST00000326279 METAP2P50579 478 aaKnown RBP eCLIP15.31■□□□□ 0.04
LIN28A-202ENST00000326279 MXD3Q9BW11 206 aa15.31■□□□□ 0.04
LIN28A-202ENST00000326279 NTSR2O95665 410 aa15.31■□□□□ 0.04
LIN28A-202ENST00000326279 HSPD1P10809 573 aaKnown RBP15.31■□□□□ 0.04
LIN28A-202ENST00000326279 GYS1P13807 737 aa15.31■□□□□ 0.04
LIN28A-202ENST00000326279 GRAPQ13588 217 aa15.31■□□□□ 0.04
LIN28A-202ENST00000326279 KLHL40Q2TBA0 621 aa15.31■□□□□ 0.04
LIN28A-202ENST00000326279 GRAPLQ8TC17 118 aaPredicted RBP15.31■□□□□ 0.04
LIN28A-202ENST00000326279 LSG1Q9H089 658 aaKnown RBP15.31■□□□□ 0.04
LIN28A-202ENST00000326279 RNF41Q9H4P4 317 aaPredicted RBP15.31■□□□□ 0.04
LIN28A-202ENST00000326279 CHD2O14647 1828 aaKnown RBP15.31■□□□□ 0.04
LIN28A-202ENST00000326279 FMN2Q9NZ56 1722 aa15.3■□□□□ 0.04
LIN28A-202ENST00000326279 TRIM28Q13263 835 aaKnown RBP15.3■□□□□ 0.04
LIN28A-202ENST00000326279 TPD52L1Q16890 204 aaPredicted RBP15.3■□□□□ 0.04
LIN28A-202ENST00000326279 XRCC6P12956 609 aaKnown RBP eCLIP15.3■□□□□ 0.04
LIN28A-202ENST00000326279 ME3Q16798 604 aa15.3■□□□□ 0.04
LIN28A-202ENST00000326279 ZNF277Q9NRM2 450 aaPredicted RBP15.3■□□□□ 0.04
LIN28A-202ENST00000326279 M0R2C6 588 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 CYP2E1P05181 493 aaPredicted RBP15.29■□□□□ 0.04
LIN28A-202ENST00000326279 RPS6KB1P23443 525 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 ZSCAN23Q3MJ62 389 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 UIMC1Q96RL1 719 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 XRN1Q8IZH2 1706 aaKnown RBP15.29■□□□□ 0.04
LIN28A-202ENST00000326279 F13A1P00488 732 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 MTX1Q13505 466 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 UBE4AQ14139 1066 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 IFIT1BQ5T764 474 aaKnown RBP15.29■□□□□ 0.04
LIN28A-202ENST00000326279 WDR66Q8TBY9 1149 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 ESR2Q92731 530 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 GPHNQ9NQX3 736 aaPredicted RBP15.29■□□□□ 0.04
LIN28A-202ENST00000326279 XDHP47989 1333 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 TCP10L2B9ZVM9 353 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 HLA-DOAP06340 250 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 GSTO1P78417 241 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 CATIPQ7Z7H3 387 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 CNKSR1Q969H4 720 aa15.29■□□□□ 0.04
LIN28A-202ENST00000326279 BSDC1Q9NW68 430 aaPredicted RBP15.29■□□□□ 0.04
LIN28A-202ENST00000326279 MED1Q15648 1581 aaPredicted RBP15.29■□□□□ 0.04
LIN28A-202ENST00000326279 CDKL5O76039 1030 aa15.28■□□□□ 0.04
LIN28A-202ENST00000326279 CCDC192P0DO97 292 aa15.28■□□□□ 0.04
LIN28A-202ENST00000326279 CDK11BP21127 795 aaKnown RBP15.28■□□□□ 0.04
LIN28A-202ENST00000326279 IARSP41252 1262 aaKnown RBP15.28■□□□□ 0.04
LIN28A-202ENST00000326279 SLC15A2Q16348 729 aa15.28■□□□□ 0.04
LIN28A-202ENST00000326279 ISM2Q6H9L7 571 aa15.28■□□□□ 0.04
LIN28A-202ENST00000326279 KAT14Q9H8E8 782 aa15.28■□□□□ 0.04
LIN28A-202ENST00000326279 USP40Q9NVE5 1235 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms