RNA–Protein interactions for RNA: ENST00000324501.9

PSEN1-201, Transcript of presenilin 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PSEN1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-201ENST00000324501 SYCP3Q8IZU3 236 aa8.33□□□□□ -1.08
PSEN1-201ENST00000324501 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.33□□□□□ -1.08
PSEN1-201ENST00000324501 PPIP5K2O43314 1243 aa8.33□□□□□ -1.08
PSEN1-201ENST00000324501 TNNT3P45378 269 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-201ENST00000324501 CACNA2D4Q7Z3S7 1137 aa8.33□□□□□ -1.08
PSEN1-201ENST00000324501 ARGLU1Q9NWB6 273 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-201ENST00000324501 MTIF2P46199 727 aaKnown RBP8.33□□□□□ -1.08
PSEN1-201ENST00000324501 UBE2HP62256 183 aa8.33□□□□□ -1.08
PSEN1-201ENST00000324501 STX1AQ16623 288 aa8.33□□□□□ -1.08
PSEN1-201ENST00000324501 TCERG1LQ5VWI1 586 aa8.33□□□□□ -1.08
PSEN1-201ENST00000324501 UNC5CLQ8IV45 518 aa8.33□□□□□ -1.08
PSEN1-201ENST00000324501 ZNF397Q8NF99 534 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-201ENST00000324501 ZSCAN16Q9H4T2 348 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-201ENST00000324501 SEC31BQ9NQW1 1179 aa8.33□□□□□ -1.08
PSEN1-201ENST00000324501 ANKARQ7Z5J8 1434 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 TNNT1P13805 278 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 GSPT1P15170 499 aaKnown RBP8.32□□□□□ -1.08
PSEN1-201ENST00000324501 CHRNDQ07001 517 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 OTUD7BQ6GQQ9 843 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 TMC6Q7Z403 805 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 BICD1Q96G01 975 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 RTL1A6NKG5 1358 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 MADDQ8WXG6 1647 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 PPP1R12BO60237 982 aaPredicted RBP8.32□□□□□ -1.08
PSEN1-201ENST00000324501 TOP1P11387 765 aaKnown RBP8.32□□□□□ -1.08
PSEN1-201ENST00000324501 ZNF174Q15697 407 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 RRAGBQ5VZM2 374 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 CERS3Q8IU89 383 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 FBXO41Q8TF61 875 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 EXOC1Q9NV70 894 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 TRMT1Q9NXH9 659 aaKnown RBP8.32□□□□□ -1.08
PSEN1-201ENST00000324501 CMTR1Q8N1G2 835 aaKnown RBP8.32□□□□□ -1.08
PSEN1-201ENST00000324501 APPBP2Q92624 585 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 DDX19AQ9NUU7 478 aaKnown RBP8.32□□□□□ -1.08
PSEN1-201ENST00000324501 SPATA31A3Q5VYP0 1347 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 RPS8P62241 208 aaKnown RBP8.32□□□□□ -1.08
PSEN1-201ENST00000324501 CCDC40Q4G0X9 1142 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 SEPT12Q8IYM1 358 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 ALDH1B1P30837 517 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 CCDC102BQ68D86 513 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 CCDC148Q8NFR7 591 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 SDR42E1Q8WUS8 393 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 GPR101Q96P66 508 aaPredicted RBP8.32□□□□□ -1.08
PSEN1-201ENST00000324501 C6orf50Q9HD87 102 aa8.32□□□□□ -1.08
PSEN1-201ENST00000324501 EAPPQ56P03 285 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-201ENST00000324501 USP8P40818 1118 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 ANO6Q4KMQ2 910 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 GRIPAP1Q4V328 841 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 VTI1AQ96AJ9 217 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 EAF2Q96CJ1 260 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-201ENST00000324501 DIP2CQ9Y2E4 1556 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 CTAGE5O15320 804 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 FAM193AP78312 1265 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 AMPD3Q01432 767 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 SMIM5Q71RC9 77 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 NLGN1Q8N2Q7 840 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 KBTBD3Q8NAB2 608 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 PHKBQ93100 1093 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 MAST3O60307 1309 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 RAD50Q92878 1312 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 NCOA3Q9Y6Q9 1424 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 A0A0D9SFI3 127 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 SPDYE3A6NKU9 549 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 ADCY5O95622 1261 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 TRIM21P19474 475 aaKnown RBP8.31□□□□□ -1.08
PSEN1-201ENST00000324501 PTH1RQ03431 593 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 SNX21Q969T3 373 aa8.31□□□□□ -1.08
PSEN1-201ENST00000324501 TCP10L2B9ZVM9 353 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 USH1GQ495M9 461 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 SPECC1Q5M775 1068 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 CCDC174Q6PII3 467 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 TTC6Q86TZ1 520 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 NIM1KQ8IY84 436 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 WDR66Q8TBY9 1149 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 USP40Q9NVE5 1235 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 DACT1Q9NYF0 836 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 TTF2Q9UNY4 1162 aaKnown RBP8.3□□□□□ -1.08
PSEN1-201ENST00000324501 CDK12Q9NYV4 1490 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-201ENST00000324501 SETD1BQ9UPS6 1966 aaKnown RBP8.3□□□□□ -1.08
PSEN1-201ENST00000324501 TBCAO75347 108 aaKnown RBP8.3□□□□□ -1.08
PSEN1-201ENST00000324501 GNAQP50148 359 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 ZNF830Q96NB3 372 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-201ENST00000324501 SGSM2O43147 1006 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 CHMP2AO43633 222 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 MFSD14BQ5SR56 506 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 AKNAD1Q5T1N1 836 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 HOMER2Q9NSB8 354 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 V9GY48 417 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-201ENST00000324501 PCCAP05165 728 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-201ENST00000324501 TDRD12Q587J7 1177 aaKnown RBP8.3□□□□□ -1.08
PSEN1-201ENST00000324501 ARHGAP27Q6ZUM4 889 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 TMC4Q7Z404 712 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 FCHSD1Q86WN1 690 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 FNBP4Q8N3X1 1017 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-201ENST00000324501 TRIM47Q96LD4 638 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 LUC7LQ9NQ29 371 aaKnown RBP8.3□□□□□ -1.08
PSEN1-201ENST00000324501 PICK1Q9NRD5 415 aa8.3□□□□□ -1.08
PSEN1-201ENST00000324501 ATF5Q9Y2D1 282 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-201ENST00000324501 KIF24Q5T7B8 1368 aa8.29□□□□□ -1.08
PSEN1-201ENST00000324501 PPEF1O14829 653 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms