RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 GPAA1O43292 621 aa23.05■■□□□ 1.28
CRLF3-201ENST00000324238 MICU3Q86XE3 530 aa23.05■■□□□ 1.28
CRLF3-201ENST00000324238 CCDC82Q8N4S0 544 aa23.05■■□□□ 1.28
CRLF3-201ENST00000324238 DPF2Q92785 391 aa23.05■■□□□ 1.28
CRLF3-201ENST00000324238 HLFQ16534 295 aa23.05■■□□□ 1.28
CRLF3-201ENST00000324238 FAM177A1Q8N128 213 aaPredicted RBP23.05■■□□□ 1.28
CRLF3-201ENST00000324238 ZNF213O14771 459 aa23.04■■□□□ 1.28
CRLF3-201ENST00000324238 IL2RBP14784 551 aa23.04■■□□□ 1.28
CRLF3-201ENST00000324238 FBXO38Q6PIJ6 1188 aa23.04■■□□□ 1.28
CRLF3-201ENST00000324238 PNOCQ13519 176 aa23.04■■□□□ 1.28
CRLF3-201ENST00000324238 ANO1Q5XXA6 986 aa23.04■■□□□ 1.28
CRLF3-201ENST00000324238 MB21D2Q8IYB1 491 aaPredicted RBP23.04■■□□□ 1.28
CRLF3-201ENST00000324238 TMOD3Q9NYL9 352 aa23.04■■□□□ 1.28
CRLF3-201ENST00000324238 PCDH11XQ9BZA7 1347 aa23.03■■□□□ 1.28
CRLF3-201ENST00000324238 PCDH11YQ9BZA8 1340 aa23.03■■□□□ 1.28
CRLF3-201ENST00000324238 IDH1O75874 414 aaKnown RBP23.03■■□□□ 1.28
CRLF3-201ENST00000324238 ERCC6LQ2NKX8 1250 aa23.03■■□□□ 1.28
CRLF3-201ENST00000324238 CCDC191Q8NCU4 936 aa23.03■■□□□ 1.28
CRLF3-201ENST00000324238 CYB5R4Q7L1T6 521 aa23.03■■□□□ 1.28
CRLF3-201ENST00000324238 ZBTB9Q96C00 473 aa23.03■■□□□ 1.28
CRLF3-201ENST00000324238 RFX7Q2KHR2 1363 aa23.03■■□□□ 1.28
CRLF3-201ENST00000324238 KIF23Q02241 960 aaPredicted RBP23.02■■□□□ 1.28
CRLF3-201ENST00000324238 GNL2Q13823 731 aaKnown RBP23.02■■□□□ 1.28
CRLF3-201ENST00000324238 METTL24Q5JXM2 366 aa23.02■■□□□ 1.28
CRLF3-201ENST00000324238 AXDND1Q5T1B0 1012 aaPredicted RBP23.02■■□□□ 1.28
CRLF3-201ENST00000324238 KIF18AQ8NI77 898 aa23.02■■□□□ 1.28
CRLF3-201ENST00000324238 B4E1Z4 1266 aa23.02■■□□□ 1.28
CRLF3-201ENST00000324238 ZNF771Q7L3S4 317 aaPredicted RBP23.02■■□□□ 1.28
CRLF3-201ENST00000324238 TBC1D10CQ8IV04 446 aa23.02■■□□□ 1.28
CRLF3-201ENST00000324238 TBC1D2BQ9UPU7 963 aa23.02■■□□□ 1.28
CRLF3-201ENST00000324238 FOXN1O15353 648 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 LDHAL6AQ6ZMR3 332 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 NCOA7Q8NI08 942 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 ALG1Q9BT22 464 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 NBPF3Q9H094 633 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 OGFRQ9NZT2 677 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 TRPM3Q9HCF6 1732 aaPredicted RBP23.01■■□□□ 1.27
CRLF3-201ENST00000324238 WDR17Q8IZU2 1322 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 SFPQP23246 707 aaKnown RBP eCLIP23.01■■□□□ 1.27
CRLF3-201ENST00000324238 IFIT5Q13325 482 aaKnown RBP23.01■■□□□ 1.27
CRLF3-201ENST00000324238 NCAPHQ15003 741 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 SLC9C2Q5TAH2 1124 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 PPP1R13BQ96KQ4 1090 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 ATP2B1P20020 1258 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 CDC27P30260 824 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 HOMER1Q86YM7 354 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 KCNG4Q8TDN1 519 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 GREM2Q9H772 168 aa23.01■■□□□ 1.27
CRLF3-201ENST00000324238 CGNQ9P2M7 1197 aaKnown RBP23.01■■□□□ 1.27
CRLF3-201ENST00000324238 TNS3Q68CZ2 1445 aa23■■□□□ 1.27
CRLF3-201ENST00000324238 MCAMP43121 646 aa23■■□□□ 1.27
CRLF3-201ENST00000324238 CMTR1Q8N1G2 835 aaKnown RBP23■■□□□ 1.27
CRLF3-201ENST00000324238 TMEM232C9JQI7 657 aa23■■□□□ 1.27
CRLF3-201ENST00000324238 CNNM1Q9NRU3 951 aa23■■□□□ 1.27
CRLF3-201ENST00000324238 DDX41Q9UJV9 622 aaKnown RBP23■■□□□ 1.27
CRLF3-201ENST00000324238 NEMFO60524 1076 aa22.99■■□□□ 1.27
CRLF3-201ENST00000324238 FANCCQ00597 558 aa22.99■■□□□ 1.27
CRLF3-201ENST00000324238 TCIRG1Q13488 830 aa22.99■■□□□ 1.27
CRLF3-201ENST00000324238 PIGBQ92521 554 aa22.99■■□□□ 1.27
CRLF3-201ENST00000324238 SCN11AQ9UI33 1791 aa22.99■■□□□ 1.27
CRLF3-201ENST00000324238 A0A1W2PQ27 194 aa22.99■■□□□ 1.27
CRLF3-201ENST00000324238 A0A1W2PQ64 194 aa22.99■■□□□ 1.27
CRLF3-201ENST00000324238 A0A1W2PQD8 194 aa22.99■■□□□ 1.27
CRLF3-201ENST00000324238 VPS37DQ86XT2 251 aa22.99■■□□□ 1.27
CRLF3-201ENST00000324238 GPR108Q9NPR9 543 aa22.99■■□□□ 1.27
CRLF3-201ENST00000324238 SYKP43405 635 aa22.98■■□□□ 1.27
CRLF3-201ENST00000324238 POLR3EQ9NVU0 708 aa22.98■■□□□ 1.27
CRLF3-201ENST00000324238 PHRF1Q9P1Y6 1649 aaKnown RBP22.98■■□□□ 1.27
CRLF3-201ENST00000324238 NLRP12P59046 1061 aa22.98■■□□□ 1.27
CRLF3-201ENST00000324238 UTP14CQ5TAP6 766 aaKnown RBP22.98■■□□□ 1.27
CRLF3-201ENST00000324238 KRT40Q6A162 431 aa22.98■■□□□ 1.27
CRLF3-201ENST00000324238 APPBP2Q92624 585 aa22.98■■□□□ 1.27
CRLF3-201ENST00000324238 ARFGEF2Q9Y6D5 1785 aa22.98■■□□□ 1.27
CRLF3-201ENST00000324238 SERPINC1P01008 464 aa22.98■■□□□ 1.27
CRLF3-201ENST00000324238 ATL3Q6DD88 541 aa22.98■■□□□ 1.27
CRLF3-201ENST00000324238 SHC4Q6S5L8 630 aa22.98■■□□□ 1.27
CRLF3-201ENST00000324238 NFXL1Q6ZNB6 911 aa22.98■■□□□ 1.27
CRLF3-201ENST00000324238 FEZ1Q99689 392 aa22.98■■□□□ 1.27
CRLF3-201ENST00000324238 EPC1Q9H2F5 836 aa22.98■■□□□ 1.27
CRLF3-201ENST00000324238 METAP2P50579 478 aaKnown RBP eCLIP22.97■■□□□ 1.27
CRLF3-201ENST00000324238 KIF6Q6ZMV9 814 aa22.97■■□□□ 1.27
CRLF3-201ENST00000324238 ZKSCAN3Q9BRR0 538 aa22.97■■□□□ 1.27
CRLF3-201ENST00000324238 HSD3B7Q9H2F3 369 aa22.97■■□□□ 1.27
CRLF3-201ENST00000324238 ITGA6P23229 1130 aa22.97■■□□□ 1.27
CRLF3-201ENST00000324238 CFAP100Q494V2 611 aa22.97■■□□□ 1.27
CRLF3-201ENST00000324238 PIH1D3Q9NQM4 214 aaKnown RBP22.97■■□□□ 1.27
CRLF3-201ENST00000324238 DNAI1Q9UI46 699 aa22.97■■□□□ 1.27
CRLF3-201ENST00000324238 ERVV-2B6SEH9 535 aa22.96■■□□□ 1.27
CRLF3-201ENST00000324238 DHX16O60231 1041 aaKnown RBP22.96■■□□□ 1.27
CRLF3-201ENST00000324238 SLU7O95391 586 aaKnown RBP22.96■■□□□ 1.27
CRLF3-201ENST00000324238 YEATS4O95619 227 aa22.96■■□□□ 1.27
CRLF3-201ENST00000324238 GTPBP4Q9BZE4 634 aaKnown RBP22.96■■□□□ 1.27
CRLF3-201ENST00000324238 OSBPL5Q9H0X9 879 aaPredicted RBP22.96■■□□□ 1.27
CRLF3-201ENST00000324238 TRDNQ13061 729 aa22.96■■□□□ 1.27
CRLF3-201ENST00000324238 ZNF827Q17R98 1081 aa22.96■■□□□ 1.27
CRLF3-201ENST00000324238 GSDMDP57764 484 aa22.95■■□□□ 1.27
CRLF3-201ENST00000324238 GRIN1Q05586 938 aa22.95■■□□□ 1.27
CRLF3-201ENST00000324238 LONRF3Q496Y0 759 aa22.95■■□□□ 1.27
CRLF3-201ENST00000324238 FOXP4Q8IVH2 680 aaPredicted RBP22.95■■□□□ 1.27
CRLF3-201ENST00000324238 UTP14AQ9BVJ6 771 aaKnown RBP22.95■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms