RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 KRT79Q5XKE5 535 aa12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 CHL1O00533 1208 aa12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 FSD2A1L4K1 749 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 IVLP07476 585 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 USP37Q86T82 979 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 NEK11Q8NG66 645 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 CAPZA3Q96KX2 299 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 MPHOSPH6Q99547 160 aaKnown RBP12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 ZKSCAN3Q9BRR0 538 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 SYNMO15061 1565 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 MYL5Q02045 173 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 KIF5AQ12840 1032 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 DTHD1Q6ZMT9 781 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 LZTFL1Q9NQ48 299 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 PTPRTO14522 1441 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 WDR78Q5VTH9 848 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 TIGD1Q96MW7 591 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 PLVAPQ9BX97 442 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 STAMBPO95630 424 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 PLCG2P16885 1265 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 KDM5CP41229 1560 aa12.35□□□□□ -0.43
SNRNP200-201ENST00000323853 DDB1Q16531 1140 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 GUCA1BQ9UMX6 200 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 A0A1B0GUL7 405 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 HDAC9Q9UKV0 1011 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 DENND2AQ9ULE3 1009 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 CFAP74Q9C0B2 1584 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 AKR1B15C9JRZ8 316 aaPredicted RBP12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 NF2P35240 595 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 MCM6Q14566 821 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 TMEM87BQ96K49 555 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 MRVI1Q9Y6F6 885 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 EYA2O00167 538 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 SGSM2O43147 1006 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 CCDC42Q96M95 316 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 BAG1Q99933 345 aaPredicted RBP12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 NSRP1Q9H0G5 558 aaKnown RBP12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 GNA11P29992 359 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 ZNF790Q6PG37 636 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 IQUBQ8NA54 791 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 ZFP91Q96JP5 570 aaPredicted RBP12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 FAM227BQ96M60 508 aa12.34□□□□□ -0.43
SNRNP200-201ENST00000323853 ZNF174Q15697 407 aa12.33□□□□□ -0.43
SNRNP200-201ENST00000323853 CNGA4Q8IV77 575 aa12.33□□□□□ -0.43
SNRNP200-201ENST00000323853 NAP1L4Q99733 375 aaKnown RBP12.33□□□□□ -0.43
SNRNP200-201ENST00000323853 FAM13AO94988 1023 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 DEXIO95424 95 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 LDHBP07195 334 aaKnown RBP12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 PARP1P09874 1014 aaKnown RBP12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 ITGA6P23229 1130 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 ANO1Q5XXA6 986 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 XAGE2Q96GT9 111 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 SUCLG2Q96I99 432 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 TNNI2P48788 182 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 MAGI3Q5TCQ9 1506 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 TMEM110-MUSTN1A8MSY1 372 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 B4E1Z4 1266 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 ATP10AO60312 1499 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 CEP170Q5SW79 1584 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 ZNF445P59923 1031 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 TICAM2Q86XR7 235 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 KIAA0232Q92628 1395 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 MYO5CQ9NQX4 1742 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 A0A1W2PRG0 241 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 ARID5AQ03989 594 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 PUM3Q15397 648 aaKnown RBP12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 PLIN2Q99541 437 aa12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 STMN4Q9H169 189 aaPredicted RBP12.33□□□□□ -0.44
SNRNP200-201ENST00000323853 PNMA6EA0A0J9YXQ4 647 aa12.32□□□□□ -0.44
SNRNP200-201ENST00000323853 VWA3AA6NCI4 1184 aa12.32□□□□□ -0.44
SNRNP200-201ENST00000323853 SPDYE3A6NKU9 549 aa12.32□□□□□ -0.44
SNRNP200-201ENST00000323853 ARMT1Q9H993 441 aa12.32□□□□□ -0.44
SNRNP200-201ENST00000323853 TPTE2Q6XPS3 522 aa12.32□□□□□ -0.44
SNRNP200-201ENST00000323853 FERMT1Q9BQL6 677 aa12.32□□□□□ -0.44
SNRNP200-201ENST00000323853 SLC52A2Q9HAB3 445 aa12.32□□□□□ -0.44
SNRNP200-201ENST00000323853 DBNDD2Q9BQY9 259 aa12.32□□□□□ -0.44
SNRNP200-201ENST00000323853 OGFRQ9NZT2 677 aa12.32□□□□□ -0.44
SNRNP200-201ENST00000323853 IKBKGQ9Y6K9 419 aa12.32□□□□□ -0.44
SNRNP200-201ENST00000323853 ABCC4O15439 1325 aa12.32□□□□□ -0.44
SNRNP200-201ENST00000323853 ZNF75DP51815 510 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 TRIM14Q14142 442 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 RILPL1Q5EBL4 403 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 C19orf44Q9H6X5 657 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 VPS18Q9P253 973 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 RSPH14Q9UHP6 348 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 NLRP12P59046 1061 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 RHOXF2BP0C7M4 288 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 SV2BQ7L1I2 683 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 RHOXF2Q9BQY4 288 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 SYNCQ9H7C4 482 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 CBX8Q9HC52 389 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 HOMER2Q9NSB8 354 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 PPP2R3AQ06190 1150 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 RGS22Q8NE09 1264 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 KLHDC4Q8TBB5 520 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 LUC7L2Q9Y383 392 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 GADD45BO75293 160 aaPredicted RBP12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 KIF4AO95239 1232 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 RBM17Q96I25 401 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 LGR6Q9HBX8 967 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms