RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 SLC9C2Q5TAH2 1124 aa25.58■■□□□ 1.69
YBX1-201ENST00000321358 USP17L8P0C7I0 530 aa25.58■■□□□ 1.68
YBX1-201ENST00000321358 NAA16Q6N069 864 aaPredicted RBP25.58■■□□□ 1.68
YBX1-201ENST00000321358 DPF2Q92785 391 aa25.58■■□□□ 1.68
YBX1-201ENST00000321358 HIP1O00291 1037 aa25.57■■□□□ 1.68
YBX1-201ENST00000321358 LDHCP07864 332 aa25.57■■□□□ 1.68
YBX1-201ENST00000321358 GMPSP49915 693 aaPredicted RBP25.57■■□□□ 1.68
YBX1-201ENST00000321358 MECOMQ03112 1051 aa25.57■■□□□ 1.68
YBX1-201ENST00000321358 GMLQ99445 158 aa25.57■■□□□ 1.68
YBX1-201ENST00000321358 SBF1O95248 1867 aa25.56■■□□□ 1.68
YBX1-201ENST00000321358 GLTPD2A6NH11 291 aa25.56■■□□□ 1.68
YBX1-201ENST00000321358 DDNO94850 711 aaPredicted RBP25.56■■□□□ 1.68
YBX1-201ENST00000321358 MAGEB6Q8N7X4 407 aa25.56■■□□□ 1.68
YBX1-201ENST00000321358 LMOD1P29536 600 aaPredicted RBP25.55■■□□□ 1.68
YBX1-201ENST00000321358 GRIK5Q16478 980 aa25.55■■□□□ 1.68
YBX1-201ENST00000321358 NSUN4Q96CB9 384 aaKnown RBP25.55■■□□□ 1.68
YBX1-201ENST00000321358 H7C1D1 291 aa25.54■■□□□ 1.68
YBX1-201ENST00000321358 HDLBPQ00341 1268 aaKnown RBP25.54■■□□□ 1.68
YBX1-201ENST00000321358 TEKT1Q969V4 418 aa25.54■■□□□ 1.68
YBX1-201ENST00000321358 MRIQ9BWK5 157 aa25.54■■□□□ 1.68
YBX1-201ENST00000321358 RNF113AO15541 343 aaKnown RBP25.53■■□□□ 1.68
YBX1-201ENST00000321358 PDE6AP16499 860 aa25.53■■□□□ 1.68
YBX1-201ENST00000321358 CYP7A1P22680 504 aa25.53■■□□□ 1.68
YBX1-201ENST00000321358 SCNN1DP51172 638 aa25.53■■□□□ 1.68
YBX1-201ENST00000321358 RBM5P52756 815 aaKnown RBP eCLIP25.53■■□□□ 1.68
YBX1-201ENST00000321358 CASC1Q6TDU7 716 aa25.53■■□□□ 1.68
YBX1-201ENST00000321358 NOL10Q9BSC4 688 aaKnown RBP25.53■■□□□ 1.68
YBX1-201ENST00000321358 DIAPH3Q9NSV4 1193 aa25.53■■□□□ 1.68
YBX1-201ENST00000321358 CNOT7Q9UIV1 285 aaKnown RBP25.53■■□□□ 1.68
YBX1-201ENST00000321358 SERPINA10Q9UK55 444 aa25.53■■□□□ 1.68
YBX1-201ENST00000321358 CCDC88AQ3V6T2 1871 aa25.53■■□□□ 1.68
YBX1-201ENST00000321358 ADD2P35612 726 aa25.53■■□□□ 1.68
YBX1-201ENST00000321358 UBE3CQ15386 1083 aa25.53■■□□□ 1.68
YBX1-201ENST00000321358 SCN9AQ15858 1988 aa25.52■■□□□ 1.68
YBX1-201ENST00000321358 AKAP11Q9UKA4 1901 aa25.52■■□□□ 1.68
YBX1-201ENST00000321358 DICER1Q9UPY3 1922 aaKnown RBP25.52■■□□□ 1.68
YBX1-201ENST00000321358 MICALL2Q8IY33 904 aa25.52■■□□□ 1.68
YBX1-201ENST00000321358 RFX7Q2KHR2 1363 aa25.51■■□□□ 1.67
YBX1-201ENST00000321358 ZNF532Q9HCE3 1301 aa25.51■■□□□ 1.67
YBX1-201ENST00000321358 DIXDC1Q155Q3 683 aa25.51■■□□□ 1.67
YBX1-201ENST00000321358 HHIPL2Q6UWX4 724 aa25.51■■□□□ 1.67
YBX1-201ENST00000321358 GPRC5DQ9NZD1 345 aa25.51■■□□□ 1.67
YBX1-201ENST00000321358 BAG3O95817 575 aa25.5■■□□□ 1.67
YBX1-201ENST00000321358 CRKP46108 304 aa25.5■■□□□ 1.67
YBX1-201ENST00000321358 FAM163AQ96GL9 167 aaPredicted RBP25.5■■□□□ 1.67
YBX1-201ENST00000321358 MYH13Q9UKX3 1938 aa25.5■■□□□ 1.67
YBX1-201ENST00000321358 DLGAP5Q15398 846 aa25.49■■□□□ 1.67
YBX1-201ENST00000321358 RUFY2Q8WXA3 655 aa25.49■■□□□ 1.67
YBX1-201ENST00000321358 APPBP2Q92624 585 aa25.49■■□□□ 1.67
YBX1-201ENST00000321358 L3MBTL3Q96JM7 780 aaPredicted RBP25.49■■□□□ 1.67
YBX1-201ENST00000321358 IQCA1LA6NCM1 817 aa25.48■■□□□ 1.67
YBX1-201ENST00000321358 CDC45O75419 566 aa25.48■■□□□ 1.67
YBX1-201ENST00000321358 ZNF280AP59817 542 aaPredicted RBP25.48■■□□□ 1.67
YBX1-201ENST00000321358 CERS3Q8IU89 383 aa25.48■■□□□ 1.67
YBX1-201ENST00000321358 MYOZ2Q9NPC6 264 aa25.48■■□□□ 1.67
YBX1-201ENST00000321358 MROH7-TTC4A0A0A0MT08 1334 aa25.48■■□□□ 1.67
YBX1-201ENST00000321358 CFAP100Q494V2 611 aa25.47■■□□□ 1.67
YBX1-201ENST00000321358 ZDHHC15Q96MV8 337 aa25.47■■□□□ 1.67
YBX1-201ENST00000321358 TIAM2Q8IVF5 1701 aa25.47■■□□□ 1.67
YBX1-201ENST00000321358 TCRBV5S4A2TA0A5A2 114 aa25.47■■□□□ 1.67
YBX1-201ENST00000321358 ZNF384Q8TF68 577 aa25.47■■□□□ 1.67
YBX1-201ENST00000321358 HACL1Q9UJ83 578 aa25.47■■□□□ 1.67
YBX1-201ENST00000321358 CHMLP26374 656 aa25.46■■□□□ 1.67
YBX1-201ENST00000321358 ZMYM1Q5SVZ6 1142 aa25.46■■□□□ 1.67
YBX1-201ENST00000321358 RBM26Q5T8P6 1007 aaKnown RBP25.46■■□□□ 1.67
YBX1-201ENST00000321358 CWC27Q6UX04 472 aaKnown RBP25.46■■□□□ 1.67
YBX1-201ENST00000321358 AIDAQ96BJ3 306 aa25.46■■□□□ 1.67
YBX1-201ENST00000321358 HELLSQ9NRZ9 838 aa25.46■■□□□ 1.67
YBX1-201ENST00000321358 DAGLAQ9Y4D2 1042 aa25.46■■□□□ 1.67
YBX1-201ENST00000321358 MAGEB6P1A0A0J9YX57 407 aa25.45■■□□□ 1.66
YBX1-201ENST00000321358 MYO1BO43795 1136 aa25.45■■□□□ 1.66
YBX1-201ENST00000321358 PLCG2P16885 1265 aa25.45■■□□□ 1.66
YBX1-201ENST00000321358 EPS15P42566 896 aa25.45■■□□□ 1.66
YBX1-201ENST00000321358 ADARB2Q9NS39 739 aaKnown RBP25.45■■□□□ 1.66
YBX1-201ENST00000321358 GAKO14976 1311 aa25.45■■□□□ 1.66
YBX1-201ENST00000321358 GPR75-ASB3A0A0A6YYF3 556 aa25.44■■□□□ 1.66
YBX1-201ENST00000321358 BTDP43251 543 aa25.44■■□□□ 1.66
YBX1-201ENST00000321358 MFAP1P55081 439 aaKnown RBP25.44■■□□□ 1.66
YBX1-201ENST00000321358 NMIQ13287 307 aaPredicted RBP25.44■■□□□ 1.66
YBX1-201ENST00000321358 MCMDC2Q4G0Z9 681 aa25.44■■□□□ 1.66
YBX1-201ENST00000321358 MIGA1Q8NAN2 632 aa25.44■■□□□ 1.66
YBX1-201ENST00000321358 MTMR14Q8NCE2 650 aa25.44■■□□□ 1.66
YBX1-201ENST00000321358 KIF4BQ2VIQ3 1234 aa25.43■■□□□ 1.66
YBX1-201ENST00000321358 SLFNL1Q499Z3 407 aa25.43■■□□□ 1.66
YBX1-201ENST00000321358 TBC1D10BQ4KMP7 808 aaPredicted RBP25.43■■□□□ 1.66
YBX1-201ENST00000321358 OSBP2Q969R2 916 aa25.43■■□□□ 1.66
YBX1-201ENST00000321358 FAM227BQ96M60 508 aa25.43■■□□□ 1.66
YBX1-201ENST00000321358 AATFQ9NY61 560 aaKnown RBP eCLIP25.43■■□□□ 1.66
YBX1-201ENST00000321358 PSME4Q14997 1843 aa25.43■■□□□ 1.66
YBX1-201ENST00000321358 SHTN1A0MZ66 631 aa25.42■■□□□ 1.66
YBX1-201ENST00000321358 SPDYE2BA6NHP3 402 aa25.42■■□□□ 1.66
YBX1-201ENST00000321358 CHGBP05060 677 aa25.42■■□□□ 1.66
YBX1-201ENST00000321358 SPDYE6P0CI01 402 aa25.42■■□□□ 1.66
YBX1-201ENST00000321358 SAMD7Q7Z3H4 446 aa25.42■■□□□ 1.66
YBX1-201ENST00000321358 ADGRA1Q86SQ6 560 aa25.42■■□□□ 1.66
YBX1-201ENST00000321358 PUS7LQ9H0K6 701 aaKnown RBP25.42■■□□□ 1.66
YBX1-201ENST00000321358 PPP4CP60510 307 aa25.42■■□□□ 1.66
YBX1-201ENST00000321358 APOBEC3HQ6NTF7 200 aaKnown RBP25.42■■□□□ 1.66
YBX1-201ENST00000321358 TMOD2Q9NZR1 351 aa25.42■■□□□ 1.66
YBX1-201ENST00000321358 VEGFAP15692 232 aaPredicted RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms