RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 C9orf78Q9NZ63 289 aaPredicted RBP4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 NIP7Q9Y221 180 aaKnown RBP eCLIP4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 UBN2Q6ZU65 1347 aa4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 SERPINB2P05120 415 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 MYL6BP14649 208 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 NFIXQ14938 502 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 NBPF5PQ86XG9 351 aaPredicted RBP4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 ZNF512BQ96KM6 892 aaPredicted RBP4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 PODXL2Q9NZ53 605 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 SBF1O95248 1867 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 PRAMEF22A3QJZ6 481 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 FKBP1AP62942 108 aaKnown RBP4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 KRT24Q2M2I5 525 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 BRICD5Q6PL45 260 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 G2E3Q7L622 706 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 PTF1AQ7RTS3 328 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 TMEM57Q8N5G2 664 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 USP44Q9H0E7 712 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 RWDD1Q9H446 243 aaPredicted RBP4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 IRS4O14654 1257 aaPredicted RBP4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 BCAR3O75815 825 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 MAP4K4O95819 1239 aaPredicted RBP4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 TAF1P21675 1872 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 NT5C2P49902 561 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 GRAPQ13588 217 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 TBC1D9BQ66K14 1250 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 PRR5LQ6MZQ0 368 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 GRAPLQ8TC17 118 aaPredicted RBP4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 GPCPD1Q9NPB8 672 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 AKAP2Q9Y2D5 859 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 SCN4AP35499 1836 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 FOCADQ5VW36 1801 aa4.08□□□□□ -1.76
SCAMP1-201ENST00000320280 ANKRD18BA2A2Z9 1011 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 MOXD2PA6NHM9 499 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 SSTR3P32745 418 aaPredicted RBP4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 IL15P40933 162 aaPredicted RBP4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 ILDR2Q71H61 639 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 CENPQQ7L2Z9 268 aaPredicted RBP4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 CERS3Q8IU89 383 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 NUDT12Q9BQG2 462 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 BEGAINQ9BUH8 593 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 RTFDC1Q9BY42 306 aaPredicted RBP4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 AAASQ9NRG9 546 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 BSDC1Q9NW68 430 aaPredicted RBP4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 TRMT112Q9UI30 125 aaKnown RBP4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 LEMD3Q9Y2U8 911 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 SALL2Q9Y467 1007 aaPredicted RBP4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 MED23Q9ULK4 1368 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 LAMB1P07942 1786 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 HOXA2O43364 376 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 CD46P15529 392 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 FOXO4P98177 505 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 FAM182BQ5T319 152 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 SUSD4Q5VX71 490 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 DEFB132Q7Z7B7 95 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 ITPRIPQ8IWB1 547 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 SP8Q8IXZ3 490 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 RTKN2Q8IZC4 609 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 HPS1Q92902 700 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 PSMD1Q99460 953 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 TMX4Q9H1E5 349 aaPredicted RBP4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 PKD2L1Q9P0L9 805 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 TLL2Q9Y6L7 1015 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 WDR90Q96KV7 1748 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 H0YIN7 160 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 CLCN1P35523 988 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 IGHMBP2P38935 993 aaKnown RBP4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 DDR1Q08345 913 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 HLFQ16534 295 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 DDX46Q7L014 1031 aaKnown RBP4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 THAP11Q96EK4 314 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 ZBTB3Q9H5J0 574 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 PPP4R2Q9NY27 417 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 SUGT1Q9Y2Z0 365 aa4.07□□□□□ -1.76
SCAMP1-201ENST00000320280 COL1A1P02452 1464 aaPredicted RBP4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 SLX4Q8IY92 1834 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 SOBPA7XYQ1 873 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 EPB41L2O43491 1005 aaKnown RBP4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 MMP10P09238 476 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 ATP2B4P23634 1241 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 IFIT5Q13325 482 aaKnown RBP4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 UBE4AQ14139 1066 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 CEP85Q6P2H3 762 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 SMC5Q8IY18 1101 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 TTLL11Q8NHH1 800 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 RPGRQ92834 1020 aaKnown RBP4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 EYA3Q99504 573 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 TBC1D2BQ9UPU7 963 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 WASF2Q9Y6W5 498 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 ELL2O00472 640 aaPredicted RBP4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 SRGNP10124 158 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 CCDC57Q2TAC2 916 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 KIF1BPQ96EK5 621 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 ARXQ96QS3 562 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 DCTPP1Q9H773 170 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 TTC41PQ6P2S7 1318 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 MAGEB6P1A0A0J9YX57 407 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 RFX5P48382 616 aaPredicted RBP4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 RAB15P59190 212 aa4.06□□□□□ -1.76
SCAMP1-201ENST00000320280 AIMP1Q12904 312 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms