RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 TRIM65Q6PJ69 517 aa17.23■□□□□ 0.35
SCAP-202ENST00000320017 BLOC1S2Q6QNY1 142 aa17.23■□□□□ 0.35
SCAP-202ENST00000320017 CHMP4BP1P59074 171 aa17.22■□□□□ 0.35
SCAP-202ENST00000320017 G3BP1Q13283 466 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCAP-202ENST00000320017 SF3A1Q15459 793 aaKnown RBP17.22■□□□□ 0.35
SCAP-202ENST00000320017 CCDC129Q6ZRS4 1044 aa17.22■□□□□ 0.35
SCAP-202ENST00000320017 CEP89Q96ST8 783 aa17.22■□□□□ 0.35
SCAP-202ENST00000320017 TATP17735 454 aaPredicted RBP17.22■□□□□ 0.35
SCAP-202ENST00000320017 CCT5P48643 541 aa17.22■□□□□ 0.35
SCAP-202ENST00000320017 SAMD1Q6SPF0 538 aaPredicted RBP17.22■□□□□ 0.35
SCAP-202ENST00000320017 RUFY2Q8WXA3 655 aa17.22■□□□□ 0.35
SCAP-202ENST00000320017 GOLPH3LQ9H4A5 285 aa17.22■□□□□ 0.35
SCAP-202ENST00000320017 KIF1CO43896 1103 aaKnown RBP17.22■□□□□ 0.35
SCAP-202ENST00000320017 RDXP35241 583 aaKnown RBP17.22■□□□□ 0.35
SCAP-202ENST00000320017 HSP90AB3PQ58FF7 597 aa17.22■□□□□ 0.35
SCAP-202ENST00000320017 DESI2Q9BSY9 194 aa17.22■□□□□ 0.35
SCAP-202ENST00000320017 ABCB6Q9NP58 842 aa17.21■□□□□ 0.35
SCAP-202ENST00000320017 PPFIA4O75335 1185 aa17.21■□□□□ 0.35
SCAP-202ENST00000320017 GLRX3O76003 335 aaKnown RBP17.21■□□□□ 0.35
SCAP-202ENST00000320017 TOP1P11387 765 aaKnown RBP17.21■□□□□ 0.35
SCAP-202ENST00000320017 BRD3Q15059 726 aa17.21■□□□□ 0.35
SCAP-202ENST00000320017 SMARCC1Q92922 1105 aaPredicted RBP17.21■□□□□ 0.35
SCAP-202ENST00000320017 MPHOSPH8Q99549 860 aa17.21■□□□□ 0.35
SCAP-202ENST00000320017 ECHDC1Q9NTX5 307 aa17.21■□□□□ 0.35
SCAP-202ENST00000320017 HNRNPH1P31943 449 aaKnown RBP17.21■□□□□ 0.34
SCAP-202ENST00000320017 EIF5P55010 431 aaKnown RBP17.21■□□□□ 0.34
SCAP-202ENST00000320017 BEND3Q5T5X7 828 aa17.21■□□□□ 0.34
SCAP-202ENST00000320017 CENPHQ9H3R5 247 aa17.21■□□□□ 0.34
SCAP-202ENST00000320017 PPP2R2CQ9Y2T4 447 aa17.21■□□□□ 0.34
SCAP-202ENST00000320017 ATP1A3P13637 1013 aa17.2■□□□□ 0.34
SCAP-202ENST00000320017 SWT1Q5T5J6 900 aaKnown RBP17.2■□□□□ 0.34
SCAP-202ENST00000320017 RIC3Q7Z5B4 369 aa17.2■□□□□ 0.34
SCAP-202ENST00000320017 KAT2BQ92831 832 aa17.2■□□□□ 0.34
SCAP-202ENST00000320017 ACBD3Q9H3P7 528 aa17.2■□□□□ 0.34
SCAP-202ENST00000320017 CCDC196A0A1B0GTZ2 297 aa17.2■□□□□ 0.34
SCAP-202ENST00000320017 A0A1B0GVL5 298 aa17.2■□□□□ 0.34
SCAP-202ENST00000320017 NEBLO76041 1014 aa17.2■□□□□ 0.34
SCAP-202ENST00000320017 UBASH3AP57075 661 aa17.2■□□□□ 0.34
SCAP-202ENST00000320017 EIF4A1P60842 406 aaKnown RBP17.2■□□□□ 0.34
SCAP-202ENST00000320017 SEC62Q99442 399 aaKnown RBP17.2■□□□□ 0.34
SCAP-202ENST00000320017 A0A0D9SFI3 127 aa17.19■□□□□ 0.34
SCAP-202ENST00000320017 FANCCQ00597 558 aa17.19■□□□□ 0.34
SCAP-202ENST00000320017 CHST3Q7LGC8 479 aa17.19■□□□□ 0.34
SCAP-202ENST00000320017 ZNF526Q8TF50 670 aaPredicted RBP17.19■□□□□ 0.34
SCAP-202ENST00000320017 EAF2Q96CJ1 260 aaPredicted RBP17.19■□□□□ 0.34
SCAP-202ENST00000320017 GDAP1L1Q96MZ0 367 aa17.19■□□□□ 0.34
SCAP-202ENST00000320017 MED4Q9NPJ6 270 aa17.19■□□□□ 0.34
SCAP-202ENST00000320017 LZTFL1Q9NQ48 299 aa17.19■□□□□ 0.34
SCAP-202ENST00000320017 PTCD1O75127 700 aaKnown RBP17.19■□□□□ 0.34
SCAP-202ENST00000320017 CREB3L3Q68CJ9 461 aa17.19■□□□□ 0.34
SCAP-202ENST00000320017 RAB11FIP4Q86YS3 637 aa17.19■□□□□ 0.34
SCAP-202ENST00000320017 ZSWIM6Q9HCJ5 1215 aa17.19■□□□□ 0.34
SCAP-202ENST00000320017 ATP2B2Q01814 1243 aa17.19■□□□□ 0.34
SCAP-202ENST00000320017 AFAP1L1Q8TED9 768 aa17.19■□□□□ 0.34
SCAP-202ENST00000320017 ATP5J2-PTCD1G3V325 749 aa17.18■□□□□ 0.34
SCAP-202ENST00000320017 GSCP56915 257 aaPredicted RBP17.18■□□□□ 0.34
SCAP-202ENST00000320017 BIRC2Q13490 618 aa17.18■□□□□ 0.34
SCAP-202ENST00000320017 IRX2Q9BZI1 471 aaPredicted RBP17.18■□□□□ 0.34
SCAP-202ENST00000320017 KCND1Q9NSA2 647 aa17.18■□□□□ 0.34
SCAP-202ENST00000320017 MRFAP1Q9Y605 127 aa17.18■□□□□ 0.34
SCAP-202ENST00000320017 KAT6BQ8WYB5 2073 aa17.18■□□□□ 0.34
SCAP-202ENST00000320017 EBAG9O00559 213 aa17.18■□□□□ 0.34
SCAP-202ENST00000320017 AKAP4Q5JQC9 854 aa17.18■□□□□ 0.34
SCAP-202ENST00000320017 GPATCH3Q96I76 525 aa17.18■□□□□ 0.34
SCAP-202ENST00000320017 SUCLG2Q96I99 432 aa17.18■□□□□ 0.34
SCAP-202ENST00000320017 VWA3AA6NCI4 1184 aa17.18■□□□□ 0.34
SCAP-202ENST00000320017 RNMTO43148 476 aaKnown RBP17.18■□□□□ 0.34
SCAP-202ENST00000320017 TMED8Q6PL24 325 aaPredicted RBP17.18■□□□□ 0.34
SCAP-202ENST00000320017 EGFL6Q8IUX8 553 aa17.18■□□□□ 0.34
SCAP-202ENST00000320017 TTC5Q8N0Z6 440 aa17.18■□□□□ 0.34
SCAP-202ENST00000320017 SLAIN2Q9P270 581 aa17.18■□□□□ 0.34
SCAP-202ENST00000320017 ANKRD26Q9UPS8 1709 aa17.17■□□□□ 0.34
SCAP-202ENST00000320017 PSMA5P28066 241 aa17.17■□□□□ 0.34
SCAP-202ENST00000320017 CASP8Q14790 479 aa17.17■□□□□ 0.34
SCAP-202ENST00000320017 KIF4BQ2VIQ3 1234 aa17.17■□□□□ 0.34
SCAP-202ENST00000320017 ZNF589Q86UQ0 364 aaPredicted RBP17.17■□□□□ 0.34
SCAP-202ENST00000320017 RNF40O75150 1001 aa17.17■□□□□ 0.34
SCAP-202ENST00000320017 FAM160A1Q05DH4 1040 aa17.17■□□□□ 0.34
SCAP-202ENST00000320017 ERC1Q8IUD2 1116 aa17.17■□□□□ 0.34
SCAP-202ENST00000320017 FAM107BQ9H098 131 aa17.17■□□□□ 0.34
SCAP-202ENST00000320017 FRMD3A2A2Y4 597 aa17.17■□□□□ 0.34
SCAP-202ENST00000320017 MAP2K7O14733 419 aa17.17■□□□□ 0.34
SCAP-202ENST00000320017 INPP5BP32019 993 aa17.17■□□□□ 0.34
SCAP-202ENST00000320017 CCT2P78371 535 aaKnown RBP17.17■□□□□ 0.34
SCAP-202ENST00000320017 MAP3K9P80192 1104 aa17.17■□□□□ 0.34
SCAP-202ENST00000320017 PNKPQ96T60 521 aa17.17■□□□□ 0.34
SCAP-202ENST00000320017 CAPN7Q9Y6W3 813 aa17.17■□□□□ 0.34
SCAP-202ENST00000320017 C1orf167Q5SNV9 1468 aa17.16■□□□□ 0.34
SCAP-202ENST00000320017 MON2Q7Z3U7 1717 aa17.16■□□□□ 0.34
SCAP-202ENST00000320017 AKAP17AQ02040 695 aaKnown RBP17.16■□□□□ 0.34
SCAP-202ENST00000320017 AMOTQ4VCS5 1084 aa17.16■□□□□ 0.34
SCAP-202ENST00000320017 BEND6Q5SZJ8 279 aaPredicted RBP17.16■□□□□ 0.34
SCAP-202ENST00000320017 RSRC2Q7L4I2 434 aaKnown RBP17.16■□□□□ 0.34
SCAP-202ENST00000320017 FAM71BQ8TC56 605 aa17.16■□□□□ 0.34
SCAP-202ENST00000320017 NEUROD6Q96NK8 337 aa17.16■□□□□ 0.34
SCAP-202ENST00000320017 CCDC85AQ96PX6 553 aaPredicted RBP17.16■□□□□ 0.34
SCAP-202ENST00000320017 KDM4FA0A1W2PPD8 638 aa17.16■□□□□ 0.34
SCAP-202ENST00000320017 USP28Q96RU2 1077 aa17.16■□□□□ 0.34
SCAP-202ENST00000320017 KDRP35968 1356 aa17.16■□□□□ 0.34
SCAP-202ENST00000320017 PEAK1Q9H792 1746 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms