RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 CCDC150Q8NCX0 1101 aa16.35■□□□□ 0.21
PABPC1-201ENST00000318607 PATL2C9JE40 543 aaKnown RBP16.35■□□□□ 0.21
PABPC1-201ENST00000318607 FMR1NBQ8N0W7 255 aaPredicted RBP16.35■□□□□ 0.21
PABPC1-201ENST00000318607 PARD6BQ9BYG5 372 aa16.35■□□□□ 0.21
PABPC1-201ENST00000318607 RAI14Q9P0K7 980 aa16.35■□□□□ 0.21
PABPC1-201ENST00000318607 COL15A1P39059 1388 aa16.35■□□□□ 0.21
PABPC1-201ENST00000318607 WDHD1O75717 1129 aaPredicted RBP16.35■□□□□ 0.21
PABPC1-201ENST00000318607 HSPD1P10809 573 aaKnown RBP16.35■□□□□ 0.21
PABPC1-201ENST00000318607 ILDR1Q86SU0 546 aaPredicted RBP16.35■□□□□ 0.21
PABPC1-201ENST00000318607 ALG1Q9BT22 464 aa16.35■□□□□ 0.21
PABPC1-201ENST00000318607 CEP170BQ9Y4F5 1589 aaPredicted RBP16.35■□□□□ 0.21
PABPC1-201ENST00000318607 MON2Q7Z3U7 1717 aa16.34■□□□□ 0.21
PABPC1-201ENST00000318607 BAG1Q99933 345 aaPredicted RBP16.34■□□□□ 0.21
PABPC1-201ENST00000318607 SBNO1A3KN83 1393 aa16.34■□□□□ 0.21
PABPC1-201ENST00000318607 GCKRQ14397 625 aa16.34■□□□□ 0.21
PABPC1-201ENST00000318607 MYSM1Q5VVJ2 828 aa16.34■□□□□ 0.21
PABPC1-201ENST00000318607 GPATCH11Q8N954 259 aa16.34■□□□□ 0.21
PABPC1-201ENST00000318607 LINC00301Q8NCQ3 95 aa16.34■□□□□ 0.21
PABPC1-201ENST00000318607 KCNJ14Q9UNX9 436 aa16.34■□□□□ 0.21
PABPC1-201ENST00000318607 PPP2R2CQ9Y2T4 447 aa16.34■□□□□ 0.21
PABPC1-201ENST00000318607 ERBB3P21860 1342 aa16.34■□□□□ 0.21
PABPC1-201ENST00000318607 KCNA6P17658 529 aa16.33■□□□□ 0.21
PABPC1-201ENST00000318607 TRDNQ13061 729 aa16.33■□□□□ 0.21
PABPC1-201ENST00000318607 ZNF569Q5MCW4 686 aa16.33■□□□□ 0.21
PABPC1-201ENST00000318607 TNRQ92752 1358 aa16.33■□□□□ 0.21
PABPC1-201ENST00000318607 PFKFB2O60825 505 aa16.33■□□□□ 0.2
PABPC1-201ENST00000318607 FDPSP14324 419 aaKnown RBP16.33■□□□□ 0.2
PABPC1-201ENST00000318607 CCT6AP40227 531 aaKnown RBP16.33■□□□□ 0.2
PABPC1-201ENST00000318607 DNA2P51530 1060 aa16.33■□□□□ 0.2
PABPC1-201ENST00000318607 SLC4A8Q2Y0W8 1093 aa16.33■□□□□ 0.2
PABPC1-201ENST00000318607 FOXR1Q6PIV2 292 aa16.33■□□□□ 0.2
PABPC1-201ENST00000318607 NFE2L3Q9Y4A8 694 aa16.33■□□□□ 0.2
PABPC1-201ENST00000318607 PCDHA5Q9Y5H7 936 aa16.33■□□□□ 0.2
PABPC1-201ENST00000318607 SOWAHDA6NJG2 315 aa16.33■□□□□ 0.2
PABPC1-201ENST00000318607 RNMTO43148 476 aaKnown RBP16.33■□□□□ 0.2
PABPC1-201ENST00000318607 TRIM29Q14134 588 aa16.33■□□□□ 0.2
PABPC1-201ENST00000318607 ANO1Q5XXA6 986 aa16.33■□□□□ 0.2
PABPC1-201ENST00000318607 ZNF496Q96IT1 587 aaPredicted RBP16.33■□□□□ 0.2
PABPC1-201ENST00000318607 CAPZA3Q96KX2 299 aa16.33■□□□□ 0.2
PABPC1-201ENST00000318607 NEURL1BA8MQ27 555 aa16.32■□□□□ 0.2
PABPC1-201ENST00000318607 CHRNA2Q15822 529 aa16.32■□□□□ 0.2
PABPC1-201ENST00000318607 ADALQ6DHV7 355 aa16.32■□□□□ 0.2
PABPC1-201ENST00000318607 LEKR1Q6ZMV7 388 aa16.32■□□□□ 0.2
PABPC1-201ENST00000318607 ENGASEQ8NFI3 743 aa16.32■□□□□ 0.2
PABPC1-201ENST00000318607 CABLES1Q8TDN4 633 aa16.32■□□□□ 0.2
PABPC1-201ENST00000318607 SLC26A6Q9BXS9 759 aa16.32■□□□□ 0.2
PABPC1-201ENST00000318607 SAMSN1Q9NSI8 373 aaKnown RBP16.32■□□□□ 0.2
PABPC1-201ENST00000318607 HDAC5Q9UQL6 1122 aa16.32■□□□□ 0.2
PABPC1-201ENST00000318607 KIF2AO00139 706 aaPredicted RBP16.32■□□□□ 0.2
PABPC1-201ENST00000318607 FANCGO15287 622 aa16.32■□□□□ 0.2
PABPC1-201ENST00000318607 ERCC3P19447 782 aa16.32■□□□□ 0.2
PABPC1-201ENST00000318607 CYP2C19P33261 490 aa16.32■□□□□ 0.2
PABPC1-201ENST00000318607 TTC19Q6DKK2 380 aaPredicted RBP16.32■□□□□ 0.2
PABPC1-201ENST00000318607 TTC39AQ5SRH9 613 aa16.32■□□□□ 0.2
PABPC1-201ENST00000318607 SENP2Q9HC62 589 aa16.32■□□□□ 0.2
PABPC1-201ENST00000318607 ITSN1Q15811 1721 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 CARMIL3Q8ND23 1372 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 PLEKHG3A1L390 1219 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 M0R2C6 588 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 ALDH1L1O75891 902 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 JAKMIP3Q5VZ66 844 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 SARM1Q6SZW1 724 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 RGS22Q8NE09 1264 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 RAPGEF4Q8WZA2 1011 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 DDX17Q92841 729 aaKnown RBP16.31■□□□□ 0.2
PABPC1-201ENST00000318607 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.31■□□□□ 0.2
PABPC1-201ENST00000318607 FAM170AA1A519 330 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 CAVIN2O95810 425 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 ADORA1P30542 326 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 MYL5Q02045 173 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 PTPN12Q05209 780 aaKnown RBP16.31■□□□□ 0.2
PABPC1-201ENST00000318607 PDE4BQ07343 736 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 HSP90B2PQ58FF3 399 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 HELBQ8NG08 1087 aaPredicted RBP16.31■□□□□ 0.2
PABPC1-201ENST00000318607 TFR2Q9UP52 801 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 POLR2DO15514 142 aaKnown RBP16.31■□□□□ 0.2
PABPC1-201ENST00000318607 NLRP12P59046 1061 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 E2F4Q16254 413 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 OSBP2Q969R2 916 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 AK7Q96M32 723 aa16.31■□□□□ 0.2
PABPC1-201ENST00000318607 KAT6BQ8WYB5 2073 aa16.3■□□□□ 0.2
PABPC1-201ENST00000318607 ARHGEF10O15013 1369 aa16.3■□□□□ 0.2
PABPC1-201ENST00000318607 USP6P35125 1406 aa16.3■□□□□ 0.2
PABPC1-201ENST00000318607 B4E1Z4 1266 aa16.3■□□□□ 0.2
PABPC1-201ENST00000318607 CDC27P30260 824 aa16.3■□□□□ 0.2
PABPC1-201ENST00000318607 GRIN1Q05586 938 aa16.3■□□□□ 0.2
PABPC1-201ENST00000318607 IMMTQ16891 758 aaKnown RBP16.3■□□□□ 0.2
PABPC1-201ENST00000318607 KCTD19Q17RG1 926 aaPredicted RBP16.3■□□□□ 0.2
PABPC1-201ENST00000318607 ADAM21Q9UKJ8 722 aa16.3■□□□□ 0.2
PABPC1-201ENST00000318607 MATR3P43243 847 aaKnown RBP eCLIP16.3■□□□□ 0.2
PABPC1-201ENST00000318607 RBM43Q6ZSC3 357 aaKnown RBP16.3■□□□□ 0.2
PABPC1-201ENST00000318607 VPS37DQ86XT2 251 aa16.3■□□□□ 0.2
PABPC1-201ENST00000318607 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
PABPC1-201ENST00000318607 FEZ2Q9UHY8 353 aaPredicted RBP16.3■□□□□ 0.2
PABPC1-201ENST00000318607 ZNF609O15014 1411 aa16.3■□□□□ 0.2
PABPC1-201ENST00000318607 ENC1O14682 589 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 ZSCAN12O43309 604 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 H2AFXP16104 143 aaPredicted RBP16.29■□□□□ 0.2
PABPC1-201ENST00000318607 CDC25BP30305 580 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 KBTBD3Q8NAB2 608 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms