RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 HSP90AA4PQ58FG1 418 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 SPTY2D1Q68D10 685 aaPredicted RBP15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 PIGBQ92521 554 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 PHKBQ93100 1093 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 KAT14Q9H8E8 782 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 TNS3Q68CZ2 1445 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 KIF5BP33176 963 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 CTDSPL2Q05D32 466 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 ZNF274Q96GC6 653 aaPredicted RBP15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 CBX8Q9HC52 389 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 STX8Q9UNK0 236 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 LMOD1P29536 600 aaPredicted RBP15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 RBM5P52756 815 aaKnown RBP eCLIP15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 SLFNL1Q499Z3 407 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 TTC14Q96N46 770 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 BAG3O95817 575 aa15.43■□□□□ 0.06
PCDHB9-201ENST00000316105 TPTE2Q6XPS3 522 aa15.43■□□□□ 0.06
PCDHB9-201ENST00000316105 CLEC17AQ6ZS10 378 aa15.43■□□□□ 0.06
PCDHB9-201ENST00000316105 KIF18AQ8NI77 898 aa15.43■□□□□ 0.06
PCDHB9-201ENST00000316105 ANKRD26Q9UPS8 1709 aa15.43■□□□□ 0.06
PCDHB9-201ENST00000316105 NR1I2O75469 434 aa15.43■□□□□ 0.06
PCDHB9-201ENST00000316105 SKILP12757 684 aa15.43■□□□□ 0.06
PCDHB9-201ENST00000316105 PDE6AP16499 860 aa15.43■□□□□ 0.06
PCDHB9-201ENST00000316105 PHKA1P46020 1223 aa15.43■□□□□ 0.06
PCDHB9-201ENST00000316105 ANO1Q5XXA6 986 aa15.43■□□□□ 0.06
PCDHB9-201ENST00000316105 ZSCAN29Q8IWY8 852 aaPredicted RBP15.43■□□□□ 0.06
PCDHB9-201ENST00000316105 USP28Q96RU2 1077 aa15.43■□□□□ 0.06
PCDHB9-201ENST00000316105 LDHCP07864 332 aa15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 SEC63Q9UGP8 760 aaKnown RBP15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 UBAP1LF5GYI3 381 aa15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 PRIMPOLQ96LW4 560 aa15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 NYXQ9GZU5 481 aa15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 NBPF26B4DH59 902 aa15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 PDE8BO95263 885 aa15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 CYP2E1P05181 493 aaPredicted RBP15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 NBPF14Q5TI25 921 aa15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 NBPF10Q6P3W6 841 aaKnown RBP15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 PDCL2Q8N4E4 241 aa15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 NBPF15Q8N660 670 aa15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 M0R2C6 588 aa15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 GNPATO15228 680 aa15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 PDIA3P30101 505 aaKnown RBP15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 C17orf53Q8N3J3 647 aaPredicted RBP15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 GOLGA6L1Q8N7Z2 621 aa15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 OSBP2Q969R2 916 aa15.42■□□□□ 0.06
PCDHB9-201ENST00000316105 KIF2AO00139 706 aaPredicted RBP15.41■□□□□ 0.06
PCDHB9-201ENST00000316105 PDCL3Q9H2J4 239 aa15.41■□□□□ 0.06
PCDHB9-201ENST00000316105 ATG3Q9NT62 314 aa15.41■□□□□ 0.06
PCDHB9-201ENST00000316105 RTCBQ9Y3I0 505 aaKnown RBP15.41■□□□□ 0.06
PCDHB9-201ENST00000316105 PRDM1O75626 825 aa15.41■□□□□ 0.06
PCDHB9-201ENST00000316105 ERCC4Q92889 916 aaPredicted RBP15.41■□□□□ 0.06
PCDHB9-201ENST00000316105 AFMP43652 599 aa15.41■□□□□ 0.06
PCDHB9-201ENST00000316105 UBASH3AP57075 661 aa15.41■□□□□ 0.06
PCDHB9-201ENST00000316105 NLRP10Q86W26 655 aa15.41■□□□□ 0.06
PCDHB9-201ENST00000316105 CCDC24Q8N4L8 307 aa15.41■□□□□ 0.06
PCDHB9-201ENST00000316105 TRIM75PA6NK02 468 aa15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 DYNC1I1O14576 645 aa15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 FAM98CQ17RN3 349 aaKnown RBP15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 KRT40Q6A162 431 aa15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 MCM9Q9NXL9 1143 aa15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 MPHOSPH10O00566 681 aaKnown RBP15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 SSBP05455 408 aaKnown RBP eCLIP15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 NAP1L1P55209 391 aaKnown RBP15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 GPS2Q13227 327 aa15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 KANK3Q6NY19 840 aa15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 CPLX3Q8WVH0 158 aa15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 VAT1LQ9HCJ6 419 aa15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 RTL9Q8NET4 1388 aa15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 ADD1P35611 737 aaKnown RBP15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 DENND2AQ9ULE3 1009 aa15.4■□□□□ 0.06
PCDHB9-201ENST00000316105 USP42Q9H9J4 1324 aaKnown RBP15.39■□□□□ 0.05
PCDHB9-201ENST00000316105 KRT18P05783 430 aaKnown RBP15.39■□□□□ 0.05
PCDHB9-201ENST00000316105 DDIT3P35638 169 aa15.39■□□□□ 0.05
PCDHB9-201ENST00000316105 CCDC70Q6NSX1 233 aa15.39■□□□□ 0.05
PCDHB9-201ENST00000316105 NSUN7Q8NE18 718 aaKnown RBP15.39■□□□□ 0.05
PCDHB9-201ENST00000316105 PDIA6Q15084 440 aa15.39■□□□□ 0.05
PCDHB9-201ENST00000316105 NCOA3Q9Y6Q9 1424 aa15.39■□□□□ 0.05
PCDHB9-201ENST00000316105 EPS15P42566 896 aa15.39■□□□□ 0.05
PCDHB9-201ENST00000316105 BCAMP50895 628 aa15.39■□□□□ 0.05
PCDHB9-201ENST00000316105 ZNHIT6Q9NWK9 470 aaKnown RBP15.39■□□□□ 0.05
PCDHB9-201ENST00000316105 IFNKQ9P0W0 207 aa15.39■□□□□ 0.05
PCDHB9-201ENST00000316105 IL6STP40189 918 aaPredicted RBP15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 MYSM1Q5VVJ2 828 aa15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 KRI1Q8N9T8 703 aaKnown RBP15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 CCDC150Q8NCX0 1101 aa15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 ZHX3Q9H4I2 956 aa15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 LOC102724428A0A0B4J2F2 783 aa15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 ZSCAN12O43309 604 aa15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 TSPY3P0CV98 308 aa15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 TSPY8P0CW00 308 aa15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 SIK1P57059 783 aa15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 AKNAD1Q5T1N1 836 aa15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 DIS3L2Q8IYB7 885 aaKnown RBP15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 SYNE4Q8N205 404 aa15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 DHX58Q96C10 678 aa15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 PUS7LQ9H0K6 701 aaKnown RBP15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 PATL2C9JE40 543 aaKnown RBP15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 HLFQ16534 295 aa15.38■□□□□ 0.05
PCDHB9-201ENST00000316105 CEP135Q66GS9 1140 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms