RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SENP2Q9HC62 589 aa8.97□□□□□ -0.97
TRIM55-202ENST00000315962 ANKIB1Q9P2G1 1089 aa8.97□□□□□ -0.97
TRIM55-202ENST00000315962 RPAP1Q9BWH6 1393 aaPredicted RBP8.97□□□□□ -0.97
TRIM55-202ENST00000315962 TUBGCP6Q96RT7 1819 aa8.97□□□□□ -0.97
TRIM55-202ENST00000315962 ZNF213O14771 459 aa8.97□□□□□ -0.97
TRIM55-202ENST00000315962 RPS8P62241 208 aaKnown RBP8.97□□□□□ -0.97
TRIM55-202ENST00000315962 SCRN1Q12765 414 aa8.97□□□□□ -0.97
TRIM55-202ENST00000315962 MSL1Q68DK7 614 aa8.97□□□□□ -0.97
TRIM55-202ENST00000315962 OTUD7BQ6GQQ9 843 aa8.97□□□□□ -0.97
TRIM55-202ENST00000315962 OLFM4Q6UX06 510 aa8.97□□□□□ -0.97
TRIM55-202ENST00000315962 CLEC4GQ6UXB4 293 aa8.97□□□□□ -0.97
TRIM55-202ENST00000315962 CCDC82Q8N4S0 544 aa8.97□□□□□ -0.97
TRIM55-202ENST00000315962 CDC5LQ99459 802 aaKnown RBP8.97□□□□□ -0.97
TRIM55-202ENST00000315962 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.97□□□□□ -0.97
TRIM55-202ENST00000315962 CYP2D7A0A087X1C5 515 aa8.96□□□□□ -0.97
TRIM55-202ENST00000315962 ADCY5O95622 1261 aa8.96□□□□□ -0.97
TRIM55-202ENST00000315962 ADD2P35612 726 aa8.96□□□□□ -0.97
TRIM55-202ENST00000315962 KRT27Q7Z3Y8 459 aa8.96□□□□□ -0.97
TRIM55-202ENST00000315962 PROM2Q8N271 834 aa8.96□□□□□ -0.97
TRIM55-202ENST00000315962 KCNB2Q92953 911 aa8.96□□□□□ -0.97
TRIM55-202ENST00000315962 TM6SF1Q9BZW5 370 aa8.96□□□□□ -0.97
TRIM55-202ENST00000315962 B4E1Z4 1266 aa8.96□□□□□ -0.98
TRIM55-202ENST00000315962 CBX1P83916 185 aa8.96□□□□□ -0.98
TRIM55-202ENST00000315962 KIAA2012Q0VF49 1180 aa8.96□□□□□ -0.98
TRIM55-202ENST00000315962 IMMTQ16891 758 aaKnown RBP8.96□□□□□ -0.98
TRIM55-202ENST00000315962 DHX32Q7L7V1 743 aaKnown RBP8.96□□□□□ -0.98
TRIM55-202ENST00000315962 LCORLQ8N3X6 602 aa8.96□□□□□ -0.98
TRIM55-202ENST00000315962 NRAPQ86VF7 1730 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 SPDYE4A6NLX3 237 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 MINDY4BA8MYZ0 360 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 UBE2Q2LH0YL09 131 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 ZSCAN22P10073 491 aaPredicted RBP8.95□□□□□ -0.98
TRIM55-202ENST00000315962 CAMK4Q16566 473 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 TBC1D10CQ8IV04 446 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 DSCC1Q9BVC3 393 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 FBXO3Q9UK99 471 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 TAF1P21675 1872 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 AP5Z1O43299 807 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 PRDM1O75626 825 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 MBD3O95983 291 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 CYP7A1P22680 504 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 DYNLL1P63167 89 aaKnown RBP8.95□□□□□ -0.98
TRIM55-202ENST00000315962 CMTR1Q8N1G2 835 aaKnown RBP8.95□□□□□ -0.98
TRIM55-202ENST00000315962 FTOQ9C0B1 505 aaKnown RBP eCLIP8.95□□□□□ -0.98
TRIM55-202ENST00000315962 NBPF3Q9H094 633 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 MTMR6Q9Y217 621 aa8.95□□□□□ -0.98
TRIM55-202ENST00000315962 WDR33Q9C0J8 1336 aaKnown RBP8.95□□□□□ -0.98
TRIM55-202ENST00000315962 MAP3K12Q12852 859 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 SASS6Q6UVJ0 657 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 CNBD1Q8NA66 436 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 FAM84BQ96KN1 310 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-202ENST00000315962 ZNF219Q9P2Y4 722 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-202ENST00000315962 NUP98P52948 1817 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 EPB41L2O43491 1005 aaKnown RBP8.94□□□□□ -0.98
TRIM55-202ENST00000315962 PRC1O43663 620 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 APBA3O96018 575 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 F13A1P00488 732 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 ARID4AP29374 1257 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-202ENST00000315962 PRDX5P30044 214 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 KRT32Q14532 448 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 RALYLQ86SE5 291 aaKnown RBP8.94□□□□□ -0.98
TRIM55-202ENST00000315962 IL17RAQ96F46 866 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 STRBPQ96SI9 672 aaKnown RBP8.94□□□□□ -0.98
TRIM55-202ENST00000315962 BSDC1Q9NW68 430 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-202ENST00000315962 SLC4A4Q9Y6R1 1079 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 CNTNAP4Q9C0A0 1308 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 TDO2P48775 406 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 CAVIN4Q5BKX8 364 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 EPB41L4AQ9HCS5 686 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-202ENST00000315962 SH2B1Q9NRF2 756 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-202ENST00000315962 TACC3Q9Y6A5 838 aa8.94□□□□□ -0.98
TRIM55-202ENST00000315962 TCRBV5S4A2TA0A5A2 114 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 CTDNEP1O95476 244 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 UQCRFS1P1P0C7P4 283 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 TTF1Q15361 905 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-202ENST00000315962 CYB5R4Q7L1T6 521 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 FAM184AQ8NB25 1140 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 ZSCAN31Q96LW9 406 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-202ENST00000315962 NAPBQ9H115 298 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 PYCARDQ9ULZ3 195 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 PCNTO95613 3336 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 KLF18A0A0U1RQI7 1052 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 H3BQV1 296 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 ZFYP08048 801 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-202ENST00000315962 GYS1P13807 737 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 PDIA3P30101 505 aaKnown RBP8.93□□□□□ -0.98
TRIM55-202ENST00000315962 TM4SF1P30408 202 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 ANTXR2P58335 489 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 EXOSC10Q01780 885 aaKnown RBP8.93□□□□□ -0.98
TRIM55-202ENST00000315962 ANKRD1Q15327 319 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 SF3B3Q15393 1217 aaKnown RBP8.93□□□□□ -0.98
TRIM55-202ENST00000315962 TXNRD1Q16881 649 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 TSGA10IPQ3SY00 556 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 IFFO2Q5TF58 517 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 MICU3Q86XE3 530 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 ZNF710Q8N1W2 664 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 GTF3C6Q969F1 213 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 AIFM3Q96NN9 605 aa8.93□□□□□ -0.98
TRIM55-202ENST00000315962 AATFQ9NY61 560 aaKnown RBP eCLIP8.93□□□□□ -0.98
TRIM55-202ENST00000315962 NEDD4P46934 1319 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms