RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 LZTFL1Q9NQ48 299 aa15.65■□□□□ 0.1
SPAST-201ENST00000315285 ITGA6P23229 1130 aa15.64■□□□□ 0.09
SPAST-201ENST00000315285 IFI16Q16666 785 aaKnown RBP15.64■□□□□ 0.09
SPAST-201ENST00000315285 MAATS1Q7Z4T9 603 aa15.64■□□□□ 0.09
SPAST-201ENST00000315285 DHX37Q8IY37 1157 aaKnown RBP15.64■□□□□ 0.09
SPAST-201ENST00000315285 CTNNBL1Q8WYA6 563 aaPredicted RBP15.64■□□□□ 0.09
SPAST-201ENST00000315285 GPAA1O43292 621 aa15.64■□□□□ 0.09
SPAST-201ENST00000315285 KRT83P78385 493 aa15.64■□□□□ 0.09
SPAST-201ENST00000315285 ORAI2Q96SN7 254 aa15.64■□□□□ 0.09
SPAST-201ENST00000315285 PALD1Q9ULE6 856 aa15.64■□□□□ 0.09
SPAST-201ENST00000315285 ST5P78524 1137 aa15.64■□□□□ 0.09
SPAST-201ENST00000315285 PPP4R3AQ6IN85 833 aa15.64■□□□□ 0.09
SPAST-201ENST00000315285 MICALCLQ6ZW33 695 aa15.64■□□□□ 0.09
SPAST-201ENST00000315285 TRMT1LQ7Z2T5 733 aaKnown RBP15.64■□□□□ 0.09
SPAST-201ENST00000315285 FEZ1Q99689 392 aa15.64■□□□□ 0.09
SPAST-201ENST00000315285 TAOK3Q9H2K8 898 aa15.64■□□□□ 0.09
SPAST-201ENST00000315285 TACC1O75410 805 aa15.64■□□□□ 0.09
SPAST-201ENST00000315285 OTUD7BQ6GQQ9 843 aa15.64■□□□□ 0.09
SPAST-201ENST00000315285 KRT86O43790 486 aa15.63■□□□□ 0.09
SPAST-201ENST00000315285 ZNF75DP51815 510 aa15.63■□□□□ 0.09
SPAST-201ENST00000315285 IL17REQ8NFR9 667 aa15.63■□□□□ 0.09
SPAST-201ENST00000315285 PLCD4Q9BRC7 762 aa15.63■□□□□ 0.09
SPAST-201ENST00000315285 MMRN2Q9H8L6 949 aa15.63■□□□□ 0.09
SPAST-201ENST00000315285 GCOM1H8Y6P7 765 aaPredicted RBP15.63■□□□□ 0.09
SPAST-201ENST00000315285 JAK2O60674 1132 aa15.63■□□□□ 0.09
SPAST-201ENST00000315285 MYZAPP0CAP1 466 aa15.63■□□□□ 0.09
SPAST-201ENST00000315285 UBXN1Q04323 297 aa15.63■□□□□ 0.09
SPAST-201ENST00000315285 TARBP1Q13395 1621 aaKnown RBP15.63■□□□□ 0.09
SPAST-201ENST00000315285 KIF5AQ12840 1032 aa15.63■□□□□ 0.09
SPAST-201ENST00000315285 MAPK8IP2Q13387 824 aaPredicted RBP15.63■□□□□ 0.09
SPAST-201ENST00000315285 ZNF496Q96IT1 587 aaPredicted RBP15.63■□□□□ 0.09
SPAST-201ENST00000315285 ME3Q16798 604 aa15.63■□□□□ 0.09
SPAST-201ENST00000315285 RNF187Q5TA31 235 aaPredicted RBP15.63■□□□□ 0.09
SPAST-201ENST00000315285 PAF1Q8N7H5 531 aa15.63■□□□□ 0.09
SPAST-201ENST00000315285 KCNH3Q9ULD8 1083 aa15.63■□□□□ 0.09
SPAST-201ENST00000315285 DTHD1Q6ZMT9 781 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 CCDC42Q96M95 316 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 BAG1Q99933 345 aaPredicted RBP15.62■□□□□ 0.09
SPAST-201ENST00000315285 RBM28Q9NW13 759 aaKnown RBP15.62■□□□□ 0.09
SPAST-201ENST00000315285 ZNF804AQ7Z570 1209 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 NYXQ9GZU5 481 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 MYO5CQ9NQX4 1742 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 BICDL2A1A5D9 508 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 DEXIO95424 95 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 EZRP15311 586 aaKnown RBP15.62■□□□□ 0.09
SPAST-201ENST00000315285 ATP5JP18859 108 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 PKP1Q13835 747 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 ZNF569Q5MCW4 686 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 SAMM50Q9Y512 469 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 SAMD9LQ8IVG5 1584 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 VWA3AA6NCI4 1184 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 A1BGP04217 495 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 PUM3Q15397 648 aaKnown RBP15.62■□□□□ 0.09
SPAST-201ENST00000315285 KRT79Q5XKE5 535 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 C17orf53Q8N3J3 647 aaPredicted RBP15.62■□□□□ 0.09
SPAST-201ENST00000315285 UBE2Q2Q8WVN8 375 aa15.62■□□□□ 0.09
SPAST-201ENST00000315285 IBTKQ9P2D0 1353 aaPredicted RBP15.62■□□□□ 0.09
SPAST-201ENST00000315285 HSF2BPO75031 334 aa15.61■□□□□ 0.09
SPAST-201ENST00000315285 TPTE2Q6XPS3 522 aa15.61■□□□□ 0.09
SPAST-201ENST00000315285 CNGA4Q8IV77 575 aa15.61■□□□□ 0.09
SPAST-201ENST00000315285 GUCA1BQ9UMX6 200 aa15.61■□□□□ 0.09
SPAST-201ENST00000315285 TTC37Q6PGP7 1564 aa15.61■□□□□ 0.09
SPAST-201ENST00000315285 RRP36Q96EU6 259 aaKnown RBP15.61■□□□□ 0.09
SPAST-201ENST00000315285 LUC7L2Q9Y383 392 aaKnown RBP15.61■□□□□ 0.09
SPAST-201ENST00000315285 F8W031 263 aaPredicted RBP15.61■□□□□ 0.09
SPAST-201ENST00000315285 PICALMQ13492 652 aa15.61■□□□□ 0.09
SPAST-201ENST00000315285 CCDC172P0C7W6 258 aa15.61■□□□□ 0.09
SPAST-201ENST00000315285 TMEM2Q9UHN6 1383 aa15.61■□□□□ 0.09
SPAST-201ENST00000315285 SH3TC1Q8TE82 1336 aa15.6■□□□□ 0.09
SPAST-201ENST00000315285 NEURL1BA8MQ27 555 aa15.6■□□□□ 0.09
SPAST-201ENST00000315285 GNA11P29992 359 aa15.6■□□□□ 0.09
SPAST-201ENST00000315285 ZNF174Q15697 407 aa15.6■□□□□ 0.09
SPAST-201ENST00000315285 EDC3Q96F86 508 aaKnown RBP15.6■□□□□ 0.09
SPAST-201ENST00000315285 ARMT1Q9H993 441 aa15.6■□□□□ 0.09
SPAST-201ENST00000315285 ABCA8O94911 1581 aa15.6■□□□□ 0.09
SPAST-201ENST00000315285 FAM135BQ49AJ0 1406 aa15.6■□□□□ 0.09
SPAST-201ENST00000315285 GIGYF1O75420 1035 aaPredicted RBP15.6■□□□□ 0.09
SPAST-201ENST00000315285 TUBB4BP68371 445 aa15.6■□□□□ 0.09
SPAST-201ENST00000315285 PTH1RQ03431 593 aa15.6■□□□□ 0.09
SPAST-201ENST00000315285 GTPBP4Q9BZE4 634 aaKnown RBP15.6■□□□□ 0.09
SPAST-201ENST00000315285 AKR1B15C9JRZ8 316 aaPredicted RBP15.6■□□□□ 0.09
SPAST-201ENST00000315285 DIS3L2Q8IYB7 885 aaKnown RBP15.6■□□□□ 0.09
SPAST-201ENST00000315285 PUF60Q9UHX1 559 aaKnown RBP15.6■□□□□ 0.09
SPAST-201ENST00000315285 MYOM2P54296 1465 aa15.6■□□□□ 0.09
SPAST-201ENST00000315285 KCNQ3O43525 872 aa15.6■□□□□ 0.09
SPAST-201ENST00000315285 TNNI2P48788 182 aa15.6■□□□□ 0.09
SPAST-201ENST00000315285 SMC1AQ14683 1233 aaKnown RBP15.6■□□□□ 0.09
SPAST-201ENST00000315285 ERO1AQ96HE7 468 aa15.6■□□□□ 0.09
SPAST-201ENST00000315285 ZNF202O95125 648 aa15.59■□□□□ 0.09
SPAST-201ENST00000315285 FANCCQ00597 558 aa15.59■□□□□ 0.09
SPAST-201ENST00000315285 GTF3C6Q969F1 213 aa15.59■□□□□ 0.09
SPAST-201ENST00000315285 EAF2Q96CJ1 260 aaPredicted RBP15.59■□□□□ 0.09
SPAST-201ENST00000315285 TIGD1Q96MW7 591 aa15.59■□□□□ 0.09
SPAST-201ENST00000315285 RIOK3O14730 519 aaKnown RBP15.59■□□□□ 0.09
SPAST-201ENST00000315285 PLCG2P16885 1265 aa15.59■□□□□ 0.09
SPAST-201ENST00000315285 ZNF622Q969S3 477 aaKnown RBP eCLIP15.59■□□□□ 0.09
SPAST-201ENST00000315285 AATKQ6ZMQ8 1374 aa15.59■□□□□ 0.09
SPAST-201ENST00000315285 CUTAO60888 179 aa15.59■□□□□ 0.09
SPAST-201ENST00000315285 DSCC1Q9BVC3 393 aa15.59■□□□□ 0.09
SPAST-201ENST00000315285 ANKRD2Q9GZV1 360 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms