RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CHMLP26374 656 aa15.39■□□□□ 0.05
CLCN6-201ENST00000312413 PPM1FP49593 454 aaPredicted RBP15.39■□□□□ 0.05
CLCN6-201ENST00000312413 PLEKHM2Q8IWE5 1019 aa15.39■□□□□ 0.05
CLCN6-201ENST00000312413 RAD50Q92878 1312 aa15.39■□□□□ 0.05
CLCN6-201ENST00000312413 DCAF8L1A6NGE4 600 aa15.39■□□□□ 0.05
CLCN6-201ENST00000312413 DTHD1Q6ZMT9 781 aa15.39■□□□□ 0.05
CLCN6-201ENST00000312413 RPRD2Q5VT52 1461 aaKnown RBP15.39■□□□□ 0.05
CLCN6-201ENST00000312413 CEP85Q6P2H3 762 aa15.39■□□□□ 0.05
CLCN6-201ENST00000312413 GPR161Q8N6U8 529 aaKnown RBP15.39■□□□□ 0.05
CLCN6-201ENST00000312413 BUB1BO60566 1050 aaPredicted RBP15.38■□□□□ 0.05
CLCN6-201ENST00000312413 CCT6AP40227 531 aaKnown RBP15.38■□□□□ 0.05
CLCN6-201ENST00000312413 CHST3Q7LGC8 479 aa15.38■□□□□ 0.05
CLCN6-201ENST00000312413 PPP1R2P41236 205 aa15.38■□□□□ 0.05
CLCN6-201ENST00000312413 ZNF445P59923 1031 aa15.38■□□□□ 0.05
CLCN6-201ENST00000312413 RPUSD2Q8IZ73 545 aaKnown RBP15.38■□□□□ 0.05
CLCN6-201ENST00000312413 C8orf58Q8NAV2 365 aa15.38■□□□□ 0.05
CLCN6-201ENST00000312413 SBNO2Q9Y2G9 1366 aa15.38■□□□□ 0.05
CLCN6-201ENST00000312413 MCM7P33993 719 aa15.38■□□□□ 0.05
CLCN6-201ENST00000312413 LMBR1LQ6UX01 489 aa15.38■□□□□ 0.05
CLCN6-201ENST00000312413 MKRN1Q9UHC7 482 aaKnown RBP15.38■□□□□ 0.05
CLCN6-201ENST00000312413 ACTN4O43707 911 aaKnown RBP15.38■□□□□ 0.05
CLCN6-201ENST00000312413 FAM13AO94988 1023 aa15.38■□□□□ 0.05
CLCN6-201ENST00000312413 ZNF75DP51815 510 aa15.38■□□□□ 0.05
CLCN6-201ENST00000312413 CYP26C1Q6V0L0 522 aa15.38■□□□□ 0.05
CLCN6-201ENST00000312413 ZNF526Q8TF50 670 aaPredicted RBP15.38■□□□□ 0.05
CLCN6-201ENST00000312413 RNF113AO15541 343 aaKnown RBP15.37■□□□□ 0.05
CLCN6-201ENST00000312413 INF2Q27J81 1249 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 CCDC152Q4G0S7 254 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 PPP1R12CQ9BZL4 782 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 SARNPP82979 210 aaKnown RBP15.37■□□□□ 0.05
CLCN6-201ENST00000312413 KSR2Q6VAB6 950 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 TTC16Q8NEE8 873 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 FAM169AQ9Y6X4 670 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 TBC1D8BQ0IIM8 1120 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 FYB2Q5VWT5 728 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 IFT20Q8IY31 132 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 VCX3BQ9H321 246 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 CEP85LQ5SZL2 805 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 RUFY4Q6ZNE9 571 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 SMC1BQ8NDV3 1235 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 ZBTB40Q9NUA8 1239 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 IMPACTQ9P2X3 320 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 EPRSP07814 1512 aaKnown RBP15.37■□□□□ 0.05
CLCN6-201ENST00000312413 GNAT2P19087 354 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 GBP1P32455 592 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 RAPGEF1Q13905 1077 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 UTP14CQ5TAP6 766 aaKnown RBP15.37■□□□□ 0.05
CLCN6-201ENST00000312413 NAA16Q6N069 864 aaPredicted RBP15.37■□□□□ 0.05
CLCN6-201ENST00000312413 XAGE3Q8WTP9 111 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 CABS1Q96KC9 395 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 CLSTN2Q9H4D0 955 aa15.37■□□□□ 0.05
CLCN6-201ENST00000312413 TSNAXIP1Q2TAA8 658 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 CEP128Q6ZU80 1094 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 GOLGA6BA6NDN3 693 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 RLBP1P12271 317 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 RPL13P26373 211 aaKnown RBP15.36■□□□□ 0.05
CLCN6-201ENST00000312413 FANCCQ00597 558 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 VWA3BQ502W6 1294 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 NOC4LQ9BVI4 516 aaKnown RBP15.36■□□□□ 0.05
CLCN6-201ENST00000312413 SMARCC2Q8TAQ2 1214 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 LEO1Q8WVC0 666 aaPredicted RBP15.36■□□□□ 0.05
CLCN6-201ENST00000312413 IQGAP2Q13576 1575 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 KIF3CO14782 793 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 ZWINTO95229 277 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 CCDC14Q49A88 953 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 CROCCP2Q86T23 111 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 MSANTD4Q8NCY6 345 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 TCHPQ9BT92 498 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 PA2G4Q9UQ80 394 aaKnown RBP15.36■□□□□ 0.05
CLCN6-201ENST00000312413 ABCC5O15440 1437 aa15.36■□□□□ 0.05
CLCN6-201ENST00000312413 COPS6Q7L5N1 327 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 ZNF354CQ86Y25 554 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 CSRNP2Q9H175 543 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 GNA11P29992 359 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 CLUL1Q15846 466 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 ARHGAP6O43182 974 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 OAS2P29728 719 aaKnown RBP15.35■□□□□ 0.05
CLCN6-201ENST00000312413 C17orf53Q8N3J3 647 aaPredicted RBP15.35■□□□□ 0.05
CLCN6-201ENST00000312413 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.35■□□□□ 0.05
CLCN6-201ENST00000312413 RRP36Q96EU6 259 aaKnown RBP15.35■□□□□ 0.05
CLCN6-201ENST00000312413 TNNQ9UQP3 1299 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 FOXO3O43524 673 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 TNNI2P48788 182 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 VPS16Q9H269 839 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 CBX8Q9HC52 389 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.35■□□□□ 0.05
CLCN6-201ENST00000312413 FAM135AQ9P2D6 1515 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 PPFIA1Q13136 1202 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 RILPL1Q5EBL4 403 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 PNMA8AQ86V59 439 aaPredicted RBP15.35■□□□□ 0.05
CLCN6-201ENST00000312413 ZRANB1Q9UGI0 708 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 CTNND2Q9UQB3 1225 aa15.35■□□□□ 0.05
CLCN6-201ENST00000312413 MPHOSPH6Q99547 160 aaKnown RBP15.34■□□□□ 0.05
CLCN6-201ENST00000312413 UTP11Q9Y3A2 253 aaKnown RBP15.34■□□□□ 0.05
CLCN6-201ENST00000312413 CDK13Q14004 1512 aaKnown RBP15.34■□□□□ 0.05
CLCN6-201ENST00000312413 VSIG1Q86XK7 387 aa15.34■□□□□ 0.05
CLCN6-201ENST00000312413 VWA3AA6NCI4 1184 aa15.34■□□□□ 0.05
CLCN6-201ENST00000312413 DCAF17Q5H9S7 520 aaPredicted RBP15.34■□□□□ 0.05
CLCN6-201ENST00000312413 HDAC9Q9UKV0 1011 aa15.34■□□□□ 0.05
CLCN6-201ENST00000312413 SPDYE3A6NKU9 549 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms