RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 CFAP57Q96MR6 1250 aa10.63□□□□□ -0.71
XCR1-201ENST00000309285 PTGS1P23219 599 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 LRRC24Q50LG9 513 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 MICALCLQ6ZW33 695 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 MYCBPQ99417 103 aaPredicted RBP10.62□□□□□ -0.71
XCR1-201ENST00000309285 POLR3DP05423 398 aaPredicted RBP10.62□□□□□ -0.71
XCR1-201ENST00000309285 CCDC175P0C221 793 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 GAS2L3Q86XJ1 694 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 VPS18Q9P253 973 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 DNAI1Q9UI46 699 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 KIF13AQ9H1H9 1805 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 ATP2C2O75185 946 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 LIG1P18858 919 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 STIM1Q13586 685 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 SLC9C2Q5TAH2 1124 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 MKNK2Q9HBH9 465 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 BMP2KQ9NSY1 1161 aaPredicted RBP10.62□□□□□ -0.71
XCR1-201ENST00000309285 RNF113AO15541 343 aaKnown RBP10.62□□□□□ -0.71
XCR1-201ENST00000309285 FAM173BQ6P4H8 233 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 ERBB4Q15303 1308 aa10.62□□□□□ -0.71
XCR1-201ENST00000309285 SETSIPP0DME0 302 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 MATR3P43243 847 aaKnown RBP eCLIP10.61□□□□□ -0.71
XCR1-201ENST00000309285 MAP9Q49MG5 647 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 ZNF652Q9Y2D9 606 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 SLC5A1P13866 664 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 RPS6KB1P23443 525 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 MAP3K12Q12852 859 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 SEPT7Q16181 437 aaKnown RBP10.61□□□□□ -0.71
XCR1-201ENST00000309285 ENOX2Q16206 610 aaKnown RBP10.61□□□□□ -0.71
XCR1-201ENST00000309285 TMC6Q7Z403 805 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 TM6SF1Q9BZW5 370 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 NAPBQ9H115 298 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 HEG1Q9ULI3 1381 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 ZFYP08048 801 aaPredicted RBP10.61□□□□□ -0.71
XCR1-201ENST00000309285 ITGA6P23229 1130 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 IQSEC3Q9UPP2 1182 aaPredicted RBP10.61□□□□□ -0.71
XCR1-201ENST00000309285 C3P01024 1663 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 GOLGA8BA8MQT2 603 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 GNG11P61952 73 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 ME3Q16798 604 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 XAGE2Q96GT9 111 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 PUS3Q9BZE2 481 aaKnown RBP10.61□□□□□ -0.71
XCR1-201ENST00000309285 WWC3Q9ULE0 1092 aa10.61□□□□□ -0.71
XCR1-201ENST00000309285 MON2Q7Z3U7 1717 aa10.6□□□□□ -0.71
XCR1-201ENST00000309285 C6orf229H3BNL8 230 aa10.6□□□□□ -0.71
XCR1-201ENST00000309285 CUL4AQ13619 759 aa10.6□□□□□ -0.71
XCR1-201ENST00000309285 MAP4K1Q92918 833 aa10.6□□□□□ -0.71
XCR1-201ENST00000309285 TNS3Q68CZ2 1445 aa10.6□□□□□ -0.71
XCR1-201ENST00000309285 KIF5CO60282 957 aa10.6□□□□□ -0.71
XCR1-201ENST00000309285 APOBRQ0VD83 1088 aa10.6□□□□□ -0.71
XCR1-201ENST00000309285 CAVIN4Q5BKX8 364 aa10.6□□□□□ -0.71
XCR1-201ENST00000309285 ZNF589Q86UQ0 364 aaPredicted RBP10.6□□□□□ -0.71
XCR1-201ENST00000309285 IL25Q9H293 177 aa10.6□□□□□ -0.71
XCR1-201ENST00000309285 RNF216Q9NWF9 866 aaPredicted RBP10.6□□□□□ -0.71
XCR1-201ENST00000309285 NIP7Q9Y221 180 aaKnown RBP eCLIP10.6□□□□□ -0.71
XCR1-201ENST00000309285 ANKRD62A6NC57 917 aa10.6□□□□□ -0.71
XCR1-201ENST00000309285 RANBP6O60518 1105 aaKnown RBP10.6□□□□□ -0.71
XCR1-201ENST00000309285 DHX32Q7L7V1 743 aaKnown RBP10.6□□□□□ -0.71
XCR1-201ENST00000309285 TMEM63CQ9P1W3 806 aa10.6□□□□□ -0.71
XCR1-201ENST00000309285 GADD45BO75293 160 aaPredicted RBP10.6□□□□□ -0.71
XCR1-201ENST00000309285 ZSWIM6Q9HCJ5 1215 aa10.6□□□□□ -0.71
XCR1-201ENST00000309285 TTLL12Q14166 644 aaPredicted RBP10.59□□□□□ -0.71
XCR1-201ENST00000309285 PDIA6Q15084 440 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 SLC4A8Q2Y0W8 1093 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 C8orf76Q96K31 380 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 MAP2K2P36507 400 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 GSDMDP57764 484 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 NAA25Q14CX7 972 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 TTF1Q15361 905 aaPredicted RBP10.59□□□□□ -0.71
XCR1-201ENST00000309285 DZIP1Q86YF9 867 aaKnown RBP10.59□□□□□ -0.71
XCR1-201ENST00000309285 ANO10Q9NW15 660 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 TMCO5BA8MYB1 307 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 CDKL5O76039 1030 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 TOP1P11387 765 aaKnown RBP10.59□□□□□ -0.71
XCR1-201ENST00000309285 SEPT6Q14141 434 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 PPM1EQ8WY54 764 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 NBPF26B4DH59 902 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 EBAG9O00559 213 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 BRD2P25440 801 aaKnown RBP10.59□□□□□ -0.71
XCR1-201ENST00000309285 NBPF14Q5TI25 921 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 NBPF10Q6P3W6 841 aaKnown RBP10.59□□□□□ -0.71
XCR1-201ENST00000309285 NBPF15Q8N660 670 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 CEP63Q96MT8 703 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 HAUS7Q99871 368 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 PAIP2Q9BPZ3 127 aaKnown RBP10.59□□□□□ -0.71
XCR1-201ENST00000309285 TPCN1Q9ULQ1 816 aa10.59□□□□□ -0.71
XCR1-201ENST00000309285 KLF18A0A0U1RQI7 1052 aa10.58□□□□□ -0.72
XCR1-201ENST00000309285 TAF5LO75529 589 aa10.58□□□□□ -0.72
XCR1-201ENST00000309285 CCDC148Q8NFR7 591 aa10.58□□□□□ -0.72
XCR1-201ENST00000309285 NCOA7Q8NI08 942 aa10.58□□□□□ -0.72
XCR1-201ENST00000309285 PIGBQ92521 554 aa10.58□□□□□ -0.72
XCR1-201ENST00000309285 HELLSQ9NRZ9 838 aa10.58□□□□□ -0.72
XCR1-201ENST00000309285 FSD2A1L4K1 749 aa10.58□□□□□ -0.72
XCR1-201ENST00000309285 KLHL10Q6JEL2 608 aa10.58□□□□□ -0.72
XCR1-201ENST00000309285 CCDC144CPQ8IYA2 1237 aa10.58□□□□□ -0.72
XCR1-201ENST00000309285 GPT2Q8TD30 523 aa10.58□□□□□ -0.72
XCR1-201ENST00000309285 CCDC12Q8WUD4 166 aaPredicted RBP10.58□□□□□ -0.72
XCR1-201ENST00000309285 ORC3Q9UBD5 711 aaPredicted RBP10.58□□□□□ -0.72
XCR1-201ENST00000309285 ELF2Q15723 593 aa10.58□□□□□ -0.72
XCR1-201ENST00000309285 IQCEQ6IPM2 695 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms