RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 HSPA6P17066 643 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 NBPF8Q3BBV2 869 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 NBPF9Q3BBW0 867 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 CCDC174Q6PII3 467 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 RAB17Q9H0T7 212 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 SART1O43290 800 aaKnown RBP4.53□□□□□ -1.68
USH2A-201ENST00000307340 BCRP11274 1271 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 SLC8A1P32418 973 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 TBC1D7Q9P0N9 293 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 AGLP35573 1532 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 ARHGAP6O43182 974 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.53□□□□□ -1.68
USH2A-201ENST00000307340 TRIM7Q9C029 511 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 ANXA13P27216 316 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 RAB3IPQ96QF0 476 aaPredicted RBP4.53□□□□□ -1.68
USH2A-201ENST00000307340 HNRNPCL1O60812 293 aaKnown RBP4.53□□□□□ -1.68
USH2A-201ENST00000307340 ZSCAN22P10073 491 aaPredicted RBP4.53□□□□□ -1.68
USH2A-201ENST00000307340 EXOC6Q8TAG9 804 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 SPZ1Q9BXG8 430 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 IFT122Q9HBG6 1241 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 OGFRQ9NZT2 677 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 SSRP1Q08945 709 aaKnown RBP4.53□□□□□ -1.68
USH2A-201ENST00000307340 LINS1Q8NG48 757 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 MIPOL1Q8TD10 442 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 RANBP1P43487 201 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 FLIIQ13045 1269 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 ZBTB17Q13105 803 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 CLEC17AQ6ZS10 378 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 DCAF5Q96JK2 942 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 CARNS1A5YM72 827 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 GRM8O00222 908 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 N4BP1O75113 896 aaKnown RBP4.53□□□□□ -1.68
USH2A-201ENST00000307340 CDC37L1Q7L3B6 337 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 YTHDC2Q9H6S0 1430 aaKnown RBP4.53□□□□□ -1.68
USH2A-201ENST00000307340 TACC1O75410 805 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 PCSK2P16519 638 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 DIS3Q9Y2L1 958 aaKnown RBP4.53□□□□□ -1.68
USH2A-201ENST00000307340 EVCP57679 992 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 ENOX2Q16206 610 aaKnown RBP4.53□□□□□ -1.68
USH2A-201ENST00000307340 AKAP4Q5JQC9 854 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 BBOF1Q8ND07 529 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 POP5Q969H6 163 aaKnown RBP4.53□□□□□ -1.68
USH2A-201ENST00000307340 CDCA7LQ96GN5 454 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 PPP1R2P1Q96PQ5 205 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 GOLGA8CPA6NN73 597 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 MCMDC2Q4G0Z9 681 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 MCM10Q7L590 875 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 SRRM1Q8IYB3 904 aaKnown RBP4.53□□□□□ -1.68
USH2A-201ENST00000307340 CRNKL1Q9BZJ0 848 aaKnown RBP4.53□□□□□ -1.68
USH2A-201ENST00000307340 IFNL2Q8IZJ0 200 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 ZNF592Q92610 1267 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 CCDC114Q96M63 670 aa4.53□□□□□ -1.68
USH2A-201ENST00000307340 NLRP5P59047 1200 aa4.53□□□□□ -1.69
USH2A-201ENST00000307340 HS2ST1Q7LGA3 356 aa4.53□□□□□ -1.69
USH2A-201ENST00000307340 ZNF710Q8N1W2 664 aa4.53□□□□□ -1.69
USH2A-201ENST00000307340 UBA7P41226 1012 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 GPATCH11Q8N954 259 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 RGL2O15211 777 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 PAX3P23760 479 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 CDC25BP30305 580 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 FLAD1Q8NFF5 587 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 HACD3Q9P035 362 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 ITGB1BP2Q9UKP3 347 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.52□□□□□ -1.69
USH2A-201ENST00000307340 AACSQ86V21 672 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 TMTC1Q8IUR5 882 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 LARSQ9P2J5 1176 aaKnown RBP4.52□□□□□ -1.69
USH2A-201ENST00000307340 DYTNA2CJ06 578 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 NAA25Q14CX7 972 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 ANKRD44Q8N8A2 993 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 TRIM11Q96F44 468 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 ARHGEF37A1IGU5 675 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 TMCO5BA8MYB1 307 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 PFDN6O15212 129 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 IARSP41252 1262 aaKnown RBP4.52□□□□□ -1.69
USH2A-201ENST00000307340 SMTNP53814 917 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 BRD3Q15059 726 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 PHLDB2Q86SQ0 1253 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 UBL4BQ8N7F7 174 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 RSRC1Q96IZ7 334 aaKnown RBP4.52□□□□□ -1.69
USH2A-201ENST00000307340 MRPL40Q9NQ50 206 aaKnown RBP4.52□□□□□ -1.69
USH2A-201ENST00000307340 CHD2O14647 1828 aaKnown RBP4.52□□□□□ -1.69
USH2A-201ENST00000307340 FLOT1O75955 427 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 GPR108Q9NPR9 543 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 TMOD3Q9NYL9 352 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 RPLP2P05387 115 aaKnown RBP4.52□□□□□ -1.69
USH2A-201ENST00000307340 EP400NLQ6ZTU2 488 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 IFT20Q8IY31 132 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 DSCC1Q9BVC3 393 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 RFX1P22670 979 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 LEO1Q8WVC0 666 aaPredicted RBP4.52□□□□□ -1.69
USH2A-201ENST00000307340 MRVI1Q9Y6F6 885 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 MROH5Q6ZUA9 1318 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 IPO5O00410 1097 aaKnown RBP4.52□□□□□ -1.69
USH2A-201ENST00000307340 FAM69CQ0P6D2 419 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 TRPC3Q13507 836 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 NUP88Q99567 741 aaPredicted RBP4.52□□□□□ -1.69
USH2A-201ENST00000307340 C6orf50Q9HD87 102 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 JRKLQ9Y4A0 524 aa4.52□□□□□ -1.69
USH2A-201ENST00000307340 GOLGA8JA6NMD2 632 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms