RNA–Protein interactions for RNA: ENST00000304338.7

PPP4R4-201, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R4, Length 3,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-201ENST00000304338 UBE3CQ15386 1083 aa17.64■□□□□ 0.41
PPP4R4-201ENST00000304338 SASS6Q6UVJ0 657 aa17.64■□□□□ 0.41
PPP4R4-201ENST00000304338 ZNF396Q96N95 335 aaPredicted RBP17.64■□□□□ 0.41
PPP4R4-201ENST00000304338 SDF4Q9BRK5 362 aa17.64■□□□□ 0.41
PPP4R4-201ENST00000304338 ROBO1Q9Y6N7 1651 aa17.63■□□□□ 0.41
PPP4R4-201ENST00000304338 MAGEB6P1A0A0J9YX57 407 aa17.63■□□□□ 0.41
PPP4R4-201ENST00000304338 DNTTIP2Q5QJE6 756 aaKnown RBP17.63■□□□□ 0.41
PPP4R4-201ENST00000304338 IFNL3Q8IZI9 196 aa17.63■□□□□ 0.41
PPP4R4-201ENST00000304338 FTOQ9C0B1 505 aaKnown RBP eCLIP17.63■□□□□ 0.41
PPP4R4-201ENST00000304338 GJB4Q9NTQ9 266 aa17.63■□□□□ 0.41
PPP4R4-201ENST00000304338 USP25Q9UHP3 1055 aa17.63■□□□□ 0.41
PPP4R4-201ENST00000304338 DZIP1Q86YF9 867 aaKnown RBP17.63■□□□□ 0.41
PPP4R4-201ENST00000304338 ARHGEF1Q92888 912 aaKnown RBP17.63■□□□□ 0.41
PPP4R4-201ENST00000304338 PHKBQ93100 1093 aa17.63■□□□□ 0.41
PPP4R4-201ENST00000304338 AFDNP55196 1824 aaKnown RBP17.63■□□□□ 0.41
PPP4R4-201ENST00000304338 ZBTB43O43298 467 aa17.63■□□□□ 0.41
PPP4R4-201ENST00000304338 NSUN7Q8NE18 718 aaKnown RBP17.63■□□□□ 0.41
PPP4R4-201ENST00000304338 AFF2P51816 1311 aa17.63■□□□□ 0.41
PPP4R4-201ENST00000304338 ESPNB1AK53 854 aa17.62■□□□□ 0.41
PPP4R4-201ENST00000304338 CLEC4GQ6UXB4 293 aa17.62■□□□□ 0.41
PPP4R4-201ENST00000304338 LCORLQ8N3X6 602 aa17.62■□□□□ 0.41
PPP4R4-201ENST00000304338 CNBD1Q8NA66 436 aa17.62■□□□□ 0.41
PPP4R4-201ENST00000304338 PDIA4P13667 645 aaKnown RBP17.62■□□□□ 0.41
PPP4R4-201ENST00000304338 SLC26A6Q9BXS9 759 aa17.62■□□□□ 0.41
PPP4R4-201ENST00000304338 QTRT2Q9H974 415 aaKnown RBP17.62■□□□□ 0.41
PPP4R4-201ENST00000304338 JCADQ9P266 1359 aa17.62■□□□□ 0.41
PPP4R4-201ENST00000304338 MAP3K11Q16584 847 aa17.62■□□□□ 0.41
PPP4R4-201ENST00000304338 NOL10Q9BSC4 688 aaKnown RBP17.62■□□□□ 0.41
PPP4R4-201ENST00000304338 ANGEL1Q9UNK9 670 aaKnown RBP17.62■□□□□ 0.41
PPP4R4-201ENST00000304338 RPS6KA4O75676 772 aa17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 LETM1O95202 739 aaPredicted RBP17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 CCDC192P0DO97 292 aa17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 PATL2C9JE40 543 aaKnown RBP17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 TRIM37O94972 964 aa17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 HSPA1LP34931 641 aa17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 TBC1D10CQ8IV04 446 aa17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 FAM43AQ8N2R8 423 aa17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 GJD4Q96KN9 370 aaPredicted RBP17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 STRBPQ96SI9 672 aaKnown RBP17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 XIRP1Q702N8 1843 aaKnown RBP17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 KINO60870 393 aaKnown RBP17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 LIG1P18858 919 aa17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 HIBADHP31937 336 aaKnown RBP17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 IARSP41252 1262 aaKnown RBP17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 LEO1Q8WVC0 666 aaPredicted RBP17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 ZSCAN16Q9H4T2 348 aaPredicted RBP17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 MINPP1Q9UNW1 487 aa17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 DISP2A7MBM2 1401 aa17.61■□□□□ 0.41
PPP4R4-201ENST00000304338 RFX7Q2KHR2 1363 aa17.6■□□□□ 0.41
PPP4R4-201ENST00000304338 CMTR1Q8N1G2 835 aaKnown RBP17.6■□□□□ 0.41
PPP4R4-201ENST00000304338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.6■□□□□ 0.41
PPP4R4-201ENST00000304338 ALG1Q9BT22 464 aa17.6■□□□□ 0.41
PPP4R4-201ENST00000304338 C6orf229H3BNL8 230 aa17.6■□□□□ 0.41
PPP4R4-201ENST00000304338 GPR101Q96P66 508 aaPredicted RBP17.6■□□□□ 0.41
PPP4R4-201ENST00000304338 AATFQ9NY61 560 aaKnown RBP eCLIP17.6■□□□□ 0.41
PPP4R4-201ENST00000304338 NARFQ9UHQ1 456 aa17.6■□□□□ 0.41
PPP4R4-201ENST00000304338 VGLL2Q8N8G2 317 aa17.59■□□□□ 0.41
PPP4R4-201ENST00000304338 ZNF274Q96GC6 653 aaPredicted RBP17.59■□□□□ 0.41
PPP4R4-201ENST00000304338 PKD1L3Q7Z443 1732 aa17.59■□□□□ 0.41
PPP4R4-201ENST00000304338 DYNLL1P63167 89 aaKnown RBP17.59■□□□□ 0.41
PPP4R4-201ENST00000304338 WTAPQ15007 396 aa17.59■□□□□ 0.41
PPP4R4-201ENST00000304338 SAFBQ15424 915 aaKnown RBP eCLIP17.59■□□□□ 0.41
PPP4R4-201ENST00000304338 SPC24Q8NBT2 197 aa17.59■□□□□ 0.41
PPP4R4-201ENST00000304338 IL17RAQ96F46 866 aa17.59■□□□□ 0.41
PPP4R4-201ENST00000304338 CDKL5O76039 1030 aa17.59■□□□□ 0.41
PPP4R4-201ENST00000304338 EXOSC10Q01780 885 aaKnown RBP17.59■□□□□ 0.41
PPP4R4-201ENST00000304338 TRIM22Q8IYM9 498 aa17.59■□□□□ 0.41
PPP4R4-201ENST00000304338 LLPHQ9BRT6 129 aaKnown RBP17.59■□□□□ 0.41
PPP4R4-201ENST00000304338 RRAGDQ9NQL2 400 aaPredicted RBP17.59■□□□□ 0.41
PPP4R4-201ENST00000304338 CYP2D7A0A087X1C5 515 aa17.58■□□□□ 0.41
PPP4R4-201ENST00000304338 TMX4Q9H1E5 349 aaPredicted RBP17.58■□□□□ 0.41
PPP4R4-201ENST00000304338 ARID4AP29374 1257 aaPredicted RBP17.58■□□□□ 0.4
PPP4R4-201ENST00000304338 CCAR1Q8IX12 1150 aaKnown RBP17.58■□□□□ 0.4
PPP4R4-201ENST00000304338 ZNF219Q9P2Y4 722 aaPredicted RBP17.58■□□□□ 0.4
PPP4R4-201ENST00000304338 SIPA1L3O60292 1781 aaPredicted RBP17.58■□□□□ 0.4
PPP4R4-201ENST00000304338 USP5P45974 858 aa17.58■□□□□ 0.4
PPP4R4-201ENST00000304338 AIFM3Q96NN9 605 aa17.58■□□□□ 0.4
PPP4R4-201ENST00000304338 BECN2A8MW95 431 aa17.57■□□□□ 0.4
PPP4R4-201ENST00000304338 FSIP1Q8NA03 581 aa17.57■□□□□ 0.4
PPP4R4-201ENST00000304338 CYB5R4Q7L1T6 521 aa17.57■□□□□ 0.4
PPP4R4-201ENST00000304338 RNF41Q9H4P4 317 aaPredicted RBP17.57■□□□□ 0.4
PPP4R4-201ENST00000304338 BSDC1Q9NW68 430 aaPredicted RBP17.57■□□□□ 0.4
PPP4R4-201ENST00000304338 ARFGEF2Q9Y6D5 1785 aa17.57■□□□□ 0.4
PPP4R4-201ENST00000304338 MARCKSP29966 332 aaPredicted RBP17.57■□□□□ 0.4
PPP4R4-201ENST00000304338 AKNAD1Q5T1N1 836 aa17.57■□□□□ 0.4
PPP4R4-201ENST00000304338 KRT23Q9C075 422 aa17.57■□□□□ 0.4
PPP4R4-201ENST00000304338 KLRK1P26718 216 aa17.56■□□□□ 0.4
PPP4R4-201ENST00000304338 UBE4AQ14139 1066 aa17.56■□□□□ 0.4
PPP4R4-201ENST00000304338 RIC1Q4ADV7 1423 aa17.56■□□□□ 0.4
PPP4R4-201ENST00000304338 USP28Q96RU2 1077 aa17.56■□□□□ 0.4
PPP4R4-201ENST00000304338 ZSWIM5Q9P217 1185 aa17.56■□□□□ 0.4
PPP4R4-201ENST00000304338 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
PPP4R4-201ENST00000304338 hCG_1642624A0A1W2PR95 340 aa17.56■□□□□ 0.4
PPP4R4-201ENST00000304338 GOLGA6L19H0YKK7 550 aa17.56■□□□□ 0.4
PPP4R4-201ENST00000304338 FGFR2P21802 821 aa17.56■□□□□ 0.4
PPP4R4-201ENST00000304338 SSRP1Q08945 709 aaKnown RBP17.56■□□□□ 0.4
PPP4R4-201ENST00000304338 ERCC4Q92889 916 aaPredicted RBP17.56■□□□□ 0.4
PPP4R4-201ENST00000304338 GNAT2P19087 354 aa17.55■□□□□ 0.4
PPP4R4-201ENST00000304338 CNNM2Q9H8M5 875 aa17.55■□□□□ 0.4
PPP4R4-201ENST00000304338 NEDD4P46934 1319 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms