RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 SMIM5Q71RC9 77 aa22.88■■□□□ 1.25
HOXC4-201ENST00000303406 CDC37L1Q7L3B6 337 aa22.88■■□□□ 1.25
HOXC4-201ENST00000303406 TMEM63CQ9P1W3 806 aa22.88■■□□□ 1.25
HOXC4-201ENST00000303406 JAK2O60674 1132 aa22.87■■□□□ 1.25
HOXC4-201ENST00000303406 MBD4O95243 580 aa22.87■■□□□ 1.25
HOXC4-201ENST00000303406 TM4SF1P30408 202 aa22.87■■□□□ 1.25
HOXC4-201ENST00000303406 KRT85P78386 507 aa22.87■■□□□ 1.25
HOXC4-201ENST00000303406 NAA16Q6N069 864 aaPredicted RBP22.87■■□□□ 1.25
HOXC4-201ENST00000303406 IFNL3Q8IZI9 196 aa22.87■■□□□ 1.25
HOXC4-201ENST00000303406 NBPF3Q9H094 633 aa22.87■■□□□ 1.25
HOXC4-201ENST00000303406 ELP1O95163 1332 aa22.87■■□□□ 1.25
HOXC4-201ENST00000303406 KCNA4P22459 653 aa22.87■■□□□ 1.25
HOXC4-201ENST00000303406 ANTXR2P58335 489 aa22.87■■□□□ 1.25
HOXC4-201ENST00000303406 FAM184AQ8NB25 1140 aa22.87■■□□□ 1.25
HOXC4-201ENST00000303406 FAM84BQ96KN1 310 aaPredicted RBP22.87■■□□□ 1.25
HOXC4-201ENST00000303406 NACAP1Q9BZK3 213 aa22.87■■□□□ 1.25
HOXC4-201ENST00000303406 ZSCAN16Q9H4T2 348 aaPredicted RBP22.87■■□□□ 1.25
HOXC4-201ENST00000303406 LRRC4BQ9NT99 713 aa22.87■■□□□ 1.25
HOXC4-201ENST00000303406 LRP2BPQ9P2M1 347 aa22.87■■□□□ 1.25
HOXC4-201ENST00000303406 NSFL1CQ9UNZ2 370 aaKnown RBP22.87■■□□□ 1.25
HOXC4-201ENST00000303406 COL1A1P02452 1464 aaPredicted RBP22.86■■□□□ 1.25
HOXC4-201ENST00000303406 PHF14O94880 888 aa22.86■■□□□ 1.25
HOXC4-201ENST00000303406 APPP05067 770 aa22.86■■□□□ 1.25
HOXC4-201ENST00000303406 DNM1Q05193 864 aaKnown RBP22.86■■□□□ 1.25
HOXC4-201ENST00000303406 NFIXQ14938 502 aa22.86■■□□□ 1.25
HOXC4-201ENST00000303406 BRWD3Q6RI45 1802 aa22.86■■□□□ 1.25
HOXC4-201ENST00000303406 PTPDC1A2A3K4 754 aa22.85■■□□□ 1.25
HOXC4-201ENST00000303406 DHX16O60231 1041 aaKnown RBP22.85■■□□□ 1.25
HOXC4-201ENST00000303406 GADD45BO75293 160 aaPredicted RBP22.85■■□□□ 1.25
HOXC4-201ENST00000303406 CTDNEP1O95476 244 aa22.85■■□□□ 1.25
HOXC4-201ENST00000303406 GYG1P46976 350 aa22.85■■□□□ 1.25
HOXC4-201ENST00000303406 LRSAM1Q6UWE0 723 aa22.85■■□□□ 1.25
HOXC4-201ENST00000303406 KRT27Q7Z3Y8 459 aa22.85■■□□□ 1.25
HOXC4-201ENST00000303406 TBC1D10CQ8IV04 446 aa22.85■■□□□ 1.25
HOXC4-201ENST00000303406 TMEM87BQ96K49 555 aa22.85■■□□□ 1.25
HOXC4-201ENST00000303406 MTA3Q9BTC8 594 aa22.85■■□□□ 1.25
HOXC4-201ENST00000303406 NAPBQ9H115 298 aa22.85■■□□□ 1.25
HOXC4-201ENST00000303406 GDPD2Q9HCC8 539 aa22.85■■□□□ 1.25
HOXC4-201ENST00000303406 EPB41L4AQ9HCS5 686 aaPredicted RBP22.85■■□□□ 1.25
HOXC4-201ENST00000303406 RBM27Q9P2N5 1060 aaKnown RBP22.85■■□□□ 1.25
HOXC4-201ENST00000303406 CACNA1SQ13698 1873 aa22.84■■□□□ 1.25
HOXC4-201ENST00000303406 GSG1L2A8MUP6 293 aa22.84■■□□□ 1.25
HOXC4-201ENST00000303406 FOXD4L6Q3SYB3 417 aaPredicted RBP22.84■■□□□ 1.25
HOXC4-201ENST00000303406 FOXD4L3Q6VB84 417 aaPredicted RBP22.84■■□□□ 1.25
HOXC4-201ENST00000303406 CNNM2Q9H8M5 875 aa22.84■■□□□ 1.25
HOXC4-201ENST00000303406 MAST2Q6P0Q8 1798 aa22.84■■□□□ 1.25
HOXC4-201ENST00000303406 CHD4Q14839 1912 aa22.84■■□□□ 1.25
HOXC4-201ENST00000303406 RESTQ13127 1097 aa22.83■■□□□ 1.25
HOXC4-201ENST00000303406 VPS37DQ86XT2 251 aa22.83■■□□□ 1.25
HOXC4-201ENST00000303406 SCAND2PQ9GZW5 306 aaPredicted RBP22.83■■□□□ 1.25
HOXC4-201ENST00000303406 ARMT1Q9H993 441 aa22.83■■□□□ 1.25
HOXC4-201ENST00000303406 BRPF3Q9ULD4 1205 aa22.83■■□□□ 1.25
HOXC4-201ENST00000303406 MYH13Q9UKX3 1938 aa22.83■■□□□ 1.24
HOXC4-201ENST00000303406 FIBPO43427 364 aa22.82■■□□□ 1.24
HOXC4-201ENST00000303406 LETM1O95202 739 aaPredicted RBP22.82■■□□□ 1.24
HOXC4-201ENST00000303406 GRAPQ13588 217 aa22.82■■□□□ 1.24
HOXC4-201ENST00000303406 CHST3Q7LGC8 479 aa22.82■■□□□ 1.24
HOXC4-201ENST00000303406 CNBD1Q8NA66 436 aa22.82■■□□□ 1.24
HOXC4-201ENST00000303406 GRAPLQ8TC17 118 aaPredicted RBP22.82■■□□□ 1.24
HOXC4-201ENST00000303406 ANGEL1Q9UNK9 670 aaKnown RBP22.82■■□□□ 1.24
HOXC4-201ENST00000303406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.82■■□□□ 1.24
HOXC4-201ENST00000303406 H3BQV1 296 aa22.82■■□□□ 1.24
HOXC4-201ENST00000303406 SH2B2O14492 632 aaPredicted RBP22.82■■□□□ 1.24
HOXC4-201ENST00000303406 CYP7A1P22680 504 aa22.82■■□□□ 1.24
HOXC4-201ENST00000303406 IFFO2Q5TF58 517 aa22.82■■□□□ 1.24
HOXC4-201ENST00000303406 LCORLQ8N3X6 602 aa22.82■■□□□ 1.24
HOXC4-201ENST00000303406 KRT23Q9C075 422 aa22.82■■□□□ 1.24
HOXC4-201ENST00000303406 IRS2Q9Y4H2 1338 aa22.82■■□□□ 1.24
HOXC4-201ENST00000303406 KLF18A0A0U1RQI7 1052 aa22.81■■□□□ 1.24
HOXC4-201ENST00000303406 CCT2P78371 535 aaKnown RBP22.81■■□□□ 1.24
HOXC4-201ENST00000303406 CCDC183Q5T5S1 534 aa22.81■■□□□ 1.24
HOXC4-201ENST00000303406 ATL3Q6DD88 541 aa22.81■■□□□ 1.24
HOXC4-201ENST00000303406 STAG1Q8WVM7 1258 aa22.81■■□□□ 1.24
HOXC4-201ENST00000303406 LEMD3Q9Y2U8 911 aa22.81■■□□□ 1.24
HOXC4-201ENST00000303406 SLC4A4Q9Y6R1 1079 aa22.81■■□□□ 1.24
HOXC4-201ENST00000303406 HIBADHP31937 336 aaKnown RBP22.8■■□□□ 1.24
HOXC4-201ENST00000303406 AKNAD1Q5T1N1 836 aa22.8■■□□□ 1.24
HOXC4-201ENST00000303406 DDX11Q96FC9 970 aa22.8■■□□□ 1.24
HOXC4-201ENST00000303406 RAI14Q9P0K7 980 aa22.8■■□□□ 1.24
HOXC4-201ENST00000303406 HPS5Q9UPZ3 1129 aa22.8■■□□□ 1.24
HOXC4-201ENST00000303406 KIAA1551Q9HCM1 1747 aa22.8■■□□□ 1.24
HOXC4-201ENST00000303406 MYH15Q9Y2K3 1946 aa22.79■■□□□ 1.24
HOXC4-201ENST00000303406 MAGEB6P1A0A0J9YX57 407 aa22.79■■□□□ 1.24
HOXC4-201ENST00000303406 GOLGA8BA8MQT2 603 aa22.79■■□□□ 1.24
HOXC4-201ENST00000303406 NPHP1O15259 732 aa22.79■■□□□ 1.24
HOXC4-201ENST00000303406 GYS1P13807 737 aa22.79■■□□□ 1.24
HOXC4-201ENST00000303406 C15orf52Q6ZUT6 534 aaKnown RBP22.79■■□□□ 1.24
HOXC4-201ENST00000303406 SGMS1Q86VZ5 419 aa22.79■■□□□ 1.24
HOXC4-201ENST00000303406 RNF41Q9H4P4 317 aaPredicted RBP22.79■■□□□ 1.24
HOXC4-201ENST00000303406 ANAPC4Q9UJX5 808 aa22.79■■□□□ 1.24
HOXC4-201ENST00000303406 LIFRP42702 1097 aa22.78■■□□□ 1.24
HOXC4-201ENST00000303406 PRR5LQ6MZQ0 368 aa22.78■■□□□ 1.24
HOXC4-201ENST00000303406 GIMAP6Q6P9H5 292 aa22.78■■□□□ 1.24
HOXC4-201ENST00000303406 CYB5R4Q7L1T6 521 aa22.78■■□□□ 1.24
HOXC4-201ENST00000303406 FERMT3Q86UX7 667 aa22.78■■□□□ 1.24
HOXC4-201ENST00000303406 ABCF2Q9UG63 623 aa22.78■■□□□ 1.24
HOXC4-201ENST00000303406 NID2Q14112 1375 aa22.78■■□□□ 1.24
HOXC4-201ENST00000303406 NEDD4P46934 1319 aa22.78■■□□□ 1.24
HOXC4-201ENST00000303406 SYCE3A1L190 88 aa22.77■■□□□ 1.24
HOXC4-201ENST00000303406 DTNBO60941 627 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms