RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ZNF804AQ7Z570 1209 aa17.14■□□□□ 0.33
SHCBP1-201ENST00000303383 TOMM22Q9NS69 142 aa17.14■□□□□ 0.33
SHCBP1-201ENST00000303383 VPS37CA5D8V6 355 aaPredicted RBP17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 BBOX1O75936 387 aa17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 AKT1S1Q96B36 256 aa17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 ZDHHC9Q9Y397 364 aa17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 UFL1O94874 794 aa17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 NCLP19338 710 aaKnown RBP17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 PDCP20941 246 aa17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 IFNL3Q8IZI9 196 aa17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 APOBRQ0VD83 1088 aa17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 LARP1BQ659C4 914 aaKnown RBP17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 CHMP4CQ96CF2 233 aa17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 GGA1Q9UJY5 639 aa17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 JAG2Q9Y219 1238 aa17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 ATP6V1DQ9Y5K8 247 aa17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 TNRC6CQ9HCJ0 1690 aaKnown RBP17.13■□□□□ 0.33
SHCBP1-201ENST00000303383 FOXP2O15409 715 aa17.12■□□□□ 0.33
SHCBP1-201ENST00000303383 SYT1P21579 422 aa17.12■□□□□ 0.33
SHCBP1-201ENST00000303383 CRY2Q49AN0 593 aa17.12■□□□□ 0.33
SHCBP1-201ENST00000303383 POTEAQ6S8J7 498 aa17.12■□□□□ 0.33
SHCBP1-201ENST00000303383 LCORLQ8N3X6 602 aa17.12■□□□□ 0.33
SHCBP1-201ENST00000303383 DDX49Q9Y6V7 483 aaKnown RBP17.12■□□□□ 0.33
SHCBP1-201ENST00000303383 PRC1O43663 620 aa17.12■□□□□ 0.33
SHCBP1-201ENST00000303383 DTNBO60941 627 aa17.12■□□□□ 0.33
SHCBP1-201ENST00000303383 SF3B2Q13435 895 aaKnown RBP17.12■□□□□ 0.33
SHCBP1-201ENST00000303383 SPTY2D1Q68D10 685 aaPredicted RBP17.12■□□□□ 0.33
SHCBP1-201ENST00000303383 MSL1Q68DK7 614 aa17.12■□□□□ 0.33
SHCBP1-201ENST00000303383 CLEC17AQ6ZS10 378 aa17.12■□□□□ 0.33
SHCBP1-201ENST00000303383 MMP10P09238 476 aa17.12■□□□□ 0.33
SHCBP1-201ENST00000303383 FAM184AQ8NB25 1140 aa17.12■□□□□ 0.33
SHCBP1-201ENST00000303383 C6orf229H3BNL8 230 aa17.11■□□□□ 0.33
SHCBP1-201ENST00000303383 DZIP1Q86YF9 867 aaKnown RBP17.11■□□□□ 0.33
SHCBP1-201ENST00000303383 ATP2B4P23634 1241 aa17.11■□□□□ 0.33
SHCBP1-201ENST00000303383 EXOSC10Q01780 885 aaKnown RBP17.11■□□□□ 0.33
SHCBP1-201ENST00000303383 GTF3C6Q969F1 213 aa17.11■□□□□ 0.33
SHCBP1-201ENST00000303383 ZSCAN22P10073 491 aaPredicted RBP17.11■□□□□ 0.33
SHCBP1-201ENST00000303383 TXNRD3Q86VQ6 643 aa17.11■□□□□ 0.33
SHCBP1-201ENST00000303383 BRIP1Q9BX63 1249 aa17.11■□□□□ 0.33
SHCBP1-201ENST00000303383 PRKAB2O43741 272 aa17.1■□□□□ 0.33
SHCBP1-201ENST00000303383 PDIA4P13667 645 aaKnown RBP17.1■□□□□ 0.33
SHCBP1-201ENST00000303383 GPSM2P81274 684 aa17.1■□□□□ 0.33
SHCBP1-201ENST00000303383 ALX1Q15699 326 aa17.1■□□□□ 0.33
SHCBP1-201ENST00000303383 CRAMP1Q96RY5 1269 aa17.1■□□□□ 0.33
SHCBP1-201ENST00000303383 KIF3AQ9Y496 699 aa17.1■□□□□ 0.33
SHCBP1-201ENST00000303383 PNPLA7Q6ZV29 1317 aa17.1■□□□□ 0.33
SHCBP1-201ENST00000303383 PRPF40AO75400 957 aaKnown RBP17.1■□□□□ 0.33
SHCBP1-201ENST00000303383 STK32BQ9NY57 414 aa17.1■□□□□ 0.33
SHCBP1-201ENST00000303383 CCT2P78371 535 aaKnown RBP17.09■□□□□ 0.33
SHCBP1-201ENST00000303383 RRP12Q5JTH9 1297 aaKnown RBP17.09■□□□□ 0.33
SHCBP1-201ENST00000303383 WDR66Q8TBY9 1149 aa17.09■□□□□ 0.33
SHCBP1-201ENST00000303383 PDE6BP35913 854 aa17.09■□□□□ 0.33
SHCBP1-201ENST00000303383 STK11IPQ8N1F8 1099 aa17.09■□□□□ 0.33
SHCBP1-201ENST00000303383 GPR101Q96P66 508 aaPredicted RBP17.09■□□□□ 0.33
SHCBP1-201ENST00000303383 GSG1L2A8MUP6 293 aa17.09■□□□□ 0.33
SHCBP1-201ENST00000303383 MINDY4BA8MYZ0 360 aa17.09■□□□□ 0.33
SHCBP1-201ENST00000303383 EN1Q05925 392 aaPredicted RBP17.09■□□□□ 0.33
SHCBP1-201ENST00000303383 MFSD6Q6ZSS7 791 aa17.09■□□□□ 0.33
SHCBP1-201ENST00000303383 TMC4Q7Z404 712 aa17.09■□□□□ 0.33
SHCBP1-201ENST00000303383 PPEF1O14829 653 aaPredicted RBP17.08■□□□□ 0.33
SHCBP1-201ENST00000303383 H3BQV1 296 aa17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 HOXA10P31260 410 aaPredicted RBP17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 CTDSPL2Q05D32 466 aa17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 ST3GAL1Q11201 340 aa17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 IFFO2Q5TF58 517 aa17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 TBC1D10CQ8IV04 446 aa17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 DDX11Q96FC9 970 aa17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 NOL10Q9BSC4 688 aaKnown RBP17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 RGS17Q9UGC6 210 aaPredicted RBP17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 PDS5AQ29RF7 1337 aaKnown RBP17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 B4E1Z4 1266 aa17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 PFKFB2O60825 505 aa17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 LDHBP07195 334 aaKnown RBP17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 MECOMQ03112 1051 aa17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 MB21D2Q8IYB1 491 aaPredicted RBP17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 SDR42E1Q8WUS8 393 aa17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 CNNM2Q9H8M5 875 aa17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 EPB41L4AQ9HCS5 686 aaPredicted RBP17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 A0A1B0GUL6 1792 aa17.08■□□□□ 0.32
SHCBP1-201ENST00000303383 DOCK2Q92608 1830 aa17.07■□□□□ 0.32
SHCBP1-201ENST00000303383 COL1A1P02452 1464 aaPredicted RBP17.07■□□□□ 0.32
SHCBP1-201ENST00000303383 PRDX5P30044 214 aa17.07■□□□□ 0.32
SHCBP1-201ENST00000303383 EZH2Q15910 746 aaKnown RBP17.07■□□□□ 0.32
SHCBP1-201ENST00000303383 NFXL1Q6ZNB6 911 aa17.07■□□□□ 0.32
SHCBP1-201ENST00000303383 KLF18A0A0U1RQI7 1052 aa17.07■□□□□ 0.32
SHCBP1-201ENST00000303383 F13A1P00488 732 aa17.07■□□□□ 0.32
SHCBP1-201ENST00000303383 ALDH1B1P30837 517 aa17.07■□□□□ 0.32
SHCBP1-201ENST00000303383 SCRN1Q12765 414 aa17.07■□□□□ 0.32
SHCBP1-201ENST00000303383 ZNF622Q969S3 477 aaKnown RBP eCLIP17.07■□□□□ 0.32
SHCBP1-201ENST00000303383 ZNF274Q96GC6 653 aaPredicted RBP17.07■□□□□ 0.32
SHCBP1-201ENST00000303383 KRT23Q9C075 422 aa17.07■□□□□ 0.32
SHCBP1-201ENST00000303383 RNF41Q9H4P4 317 aaPredicted RBP17.07■□□□□ 0.32
SHCBP1-201ENST00000303383 ZMYM6O95789 1325 aa17.07■□□□□ 0.32
SHCBP1-201ENST00000303383 G3V3G9 751 aa17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 CPLX1O14810 134 aa17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 DHX16O60231 1041 aaKnown RBP17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 NPR1P16066 1061 aa17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 DYNLL1P63167 89 aaKnown RBP17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 DCAF8Q5TAQ9 597 aa17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 ADGRA1Q86SQ6 560 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms