RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 ZSCAN22P10073 491 aaPredicted RBP12.53□□□□□ -0.4
CLP1-201ENST00000302731 ZNF827Q17R98 1081 aa12.53□□□□□ -0.4
CLP1-201ENST00000302731 RALYLQ86SE5 291 aaKnown RBP12.53□□□□□ -0.4
CLP1-201ENST00000302731 IFNL3Q8IZI9 196 aa12.53□□□□□ -0.4
CLP1-201ENST00000302731 NECAB1Q8N987 351 aa12.53□□□□□ -0.4
CLP1-201ENST00000302731 BRF1Q92994 677 aa12.53□□□□□ -0.4
CLP1-201ENST00000302731 NACAP1Q9BZK3 213 aa12.53□□□□□ -0.4
CLP1-201ENST00000302731 SALL1Q9NSC2 1324 aa12.53□□□□□ -0.4
CLP1-201ENST00000302731 WTIPA6NIX2 430 aaPredicted RBP12.52□□□□□ -0.4
CLP1-201ENST00000302731 APPP05067 770 aa12.52□□□□□ -0.4
CLP1-201ENST00000302731 TRDNQ13061 729 aa12.52□□□□□ -0.4
CLP1-201ENST00000302731 KLHL40Q2TBA0 621 aa12.52□□□□□ -0.4
CLP1-201ENST00000302731 MCTP1Q6DN14 999 aa12.52□□□□□ -0.4
CLP1-201ENST00000302731 COL23A1Q86Y22 540 aaPredicted RBP12.52□□□□□ -0.4
CLP1-201ENST00000302731 BRIP1Q9BX63 1249 aa12.52□□□□□ -0.4
CLP1-201ENST00000302731 NAPBQ9H115 298 aa12.52□□□□□ -0.4
CLP1-201ENST00000302731 RAI14Q9P0K7 980 aa12.52□□□□□ -0.4
CLP1-201ENST00000302731 ANKIB1Q9P2G1 1089 aa12.52□□□□□ -0.4
CLP1-201ENST00000302731 ABCF2Q9UG63 623 aa12.52□□□□□ -0.4
CLP1-201ENST00000302731 CACNA1SQ13698 1873 aa12.52□□□□□ -0.4
CLP1-201ENST00000302731 MYH13Q9UKX3 1938 aa12.52□□□□□ -0.41
CLP1-201ENST00000302731 TIAM2Q8IVF5 1701 aa12.52□□□□□ -0.41
CLP1-201ENST00000302731 GSG1L2A8MUP6 293 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 CYP7A1P22680 504 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 ATP2B4P23634 1241 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 KLRK1P26718 216 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 HAND2P61296 217 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 ARMT1Q9H993 441 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 EPB41L4AQ9HCS5 686 aaPredicted RBP12.51□□□□□ -0.41
CLP1-201ENST00000302731 LMBRD1Q9NUN5 540 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 PODXL2Q9NZ53 605 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 IQSEC3Q9UPP2 1182 aaPredicted RBP12.51□□□□□ -0.41
CLP1-201ENST00000302731 F13A1P00488 732 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 HMGN5P82970 282 aaKnown RBP12.51□□□□□ -0.41
CLP1-201ENST00000302731 SPTY2D1Q68D10 685 aaPredicted RBP12.51□□□□□ -0.41
CLP1-201ENST00000302731 NAA16Q6N069 864 aaPredicted RBP12.51□□□□□ -0.41
CLP1-201ENST00000302731 GIMAP6Q6P9H5 292 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 LCORLQ8N3X6 602 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 SMARCC2Q8TAQ2 1214 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 MTA3Q9BTC8 594 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 NBPF3Q9H094 633 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 CNNM2Q9H8M5 875 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 MTMR6Q9Y217 621 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 DUOX1Q9NRD9 1551 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 MAST2Q6P0Q8 1798 aa12.51□□□□□ -0.41
CLP1-201ENST00000302731 MAGEB6P1A0A0J9YX57 407 aa12.5□□□□□ -0.41
CLP1-201ENST00000302731 PRC1O43663 620 aa12.5□□□□□ -0.41
CLP1-201ENST00000302731 SCRN1Q12765 414 aa12.5□□□□□ -0.41
CLP1-201ENST00000302731 LARP1BQ659C4 914 aaKnown RBP12.5□□□□□ -0.41
CLP1-201ENST00000302731 ZNF804AQ7Z570 1209 aa12.5□□□□□ -0.41
CLP1-201ENST00000302731 TDRD7Q8NHU6 1098 aaKnown RBP12.5□□□□□ -0.41
CLP1-201ENST00000302731 WDR66Q8TBY9 1149 aa12.5□□□□□ -0.41
CLP1-201ENST00000302731 NSUN4Q96CB9 384 aaKnown RBP12.5□□□□□ -0.41
CLP1-201ENST00000302731 TMEM87BQ96K49 555 aa12.5□□□□□ -0.41
CLP1-201ENST00000302731 RIOK1Q9BRS2 568 aaKnown RBP12.5□□□□□ -0.41
CLP1-201ENST00000302731 LRRC2Q9BYS8 371 aa12.5□□□□□ -0.41
CLP1-201ENST00000302731 RGS17Q9UGC6 210 aaPredicted RBP12.5□□□□□ -0.41
CLP1-201ENST00000302731 KIF3AQ9Y496 699 aa12.5□□□□□ -0.41
CLP1-201ENST00000302731 SLC4A4Q9Y6R1 1079 aa12.5□□□□□ -0.41
CLP1-201ENST00000302731 LRRC37AA6NMS7 1700 aa12.5□□□□□ -0.41
CLP1-201ENST00000302731 KIAA1551Q9HCM1 1747 aa12.49□□□□□ -0.41
CLP1-201ENST00000302731 PDIA3P30101 505 aaKnown RBP12.49□□□□□ -0.41
CLP1-201ENST00000302731 ANTXR2P58335 489 aa12.49□□□□□ -0.41
CLP1-201ENST00000302731 APOBRQ0VD83 1088 aa12.49□□□□□ -0.41
CLP1-201ENST00000302731 TXNRD3Q86VQ6 643 aa12.49□□□□□ -0.41
CLP1-201ENST00000302731 TBC1D10CQ8IV04 446 aa12.49□□□□□ -0.41
CLP1-201ENST00000302731 TMEM87AQ8NBN3 555 aa12.49□□□□□ -0.41
CLP1-201ENST00000302731 STAG1Q8WVM7 1258 aa12.49□□□□□ -0.41
CLP1-201ENST00000302731 KRT23Q9C075 422 aa12.49□□□□□ -0.41
CLP1-201ENST00000302731 ISY1Q9ULR0 285 aaKnown RBP12.49□□□□□ -0.41
CLP1-201ENST00000302731 DHX16O60231 1041 aaKnown RBP12.48□□□□□ -0.41
CLP1-201ENST00000302731 GPSM2P81274 684 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 STK3Q13188 491 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 AKNAD1Q5T1N1 836 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 ADGRA1Q86SQ6 560 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 SP8Q8IXZ3 490 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 RNF41Q9H4P4 317 aaPredicted RBP12.48□□□□□ -0.41
CLP1-201ENST00000302731 ANAPC4Q9UJX5 808 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 GGA1Q9UJY5 639 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 DDX49Q9Y6V7 483 aaKnown RBP12.48□□□□□ -0.41
CLP1-201ENST00000302731 ANKRD31Q8N7Z5 1873 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 PRPF40AO75400 957 aaKnown RBP12.48□□□□□ -0.41
CLP1-201ENST00000302731 MBD3O95983 291 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 PCP11498 1178 aaKnown RBP12.48□□□□□ -0.41
CLP1-201ENST00000302731 NPR1P16066 1061 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 PDE6BP35913 854 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 TDO2P48775 406 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 FOXD4L5Q5VV16 416 aaPredicted RBP12.48□□□□□ -0.41
CLP1-201ENST00000302731 MIGA1Q8NAN2 632 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 RGS22Q8NE09 1264 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 NSUN7Q8NE18 718 aaKnown RBP12.48□□□□□ -0.41
CLP1-201ENST00000302731 ZNF384Q8TF68 577 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 FOXD4L4Q8WXT5 416 aaPredicted RBP12.48□□□□□ -0.41
CLP1-201ENST00000302731 ANGEL1Q9UNK9 670 aaKnown RBP12.48□□□□□ -0.41
CLP1-201ENST00000302731 NSFL1CQ9UNZ2 370 aaKnown RBP12.48□□□□□ -0.41
CLP1-201ENST00000302731 PARP3Q9Y6F1 533 aa12.48□□□□□ -0.41
CLP1-201ENST00000302731 CCDC88AQ3V6T2 1871 aa12.47□□□□□ -0.41
CLP1-201ENST00000302731 LTBP1Q14766 1721 aa12.47□□□□□ -0.41
CLP1-201ENST00000302731 PRKAB2O43741 272 aa12.47□□□□□ -0.41
CLP1-201ENST00000302731 SRGNP10124 158 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms