RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 GNAT2P19087 354 aa14.25□□□□□ -0.13
TPM3-202ENST00000302206 DDR1Q08345 913 aa14.25□□□□□ -0.13
TPM3-202ENST00000302206 NOL8Q76FK4 1167 aaKnown RBP14.25□□□□□ -0.13
TPM3-202ENST00000302206 DHX32Q7L7V1 743 aaKnown RBP14.25□□□□□ -0.13
TPM3-202ENST00000302206 TMC4Q7Z404 712 aa14.25□□□□□ -0.13
TPM3-202ENST00000302206 RPGRQ92834 1020 aaKnown RBP14.25□□□□□ -0.13
TPM3-202ENST00000302206 MYO5AQ9Y4I1 1855 aaKnown RBP14.25□□□□□ -0.13
TPM3-202ENST00000302206 WDR90Q96KV7 1748 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 WDR19Q8NEZ3 1342 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 E7EWF7 191 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 CAPN15O75808 1086 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 BBOX1O75936 387 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 TOMM70O94826 608 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 BRD1O95696 1058 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 FGAP02671 866 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 GYG1P46976 350 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 EXOSC10Q01780 885 aaKnown RBP14.24□□□□□ -0.13
TPM3-202ENST00000302206 TOB2Q14106 344 aaPredicted RBP14.24□□□□□ -0.13
TPM3-202ENST00000302206 STOX1Q6ZVD7 989 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 VPS37DQ86XT2 251 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 CCDC24Q8N4L8 307 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 DNAJC5GQ8N7S2 189 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 MAGEB6Q8N7X4 407 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 CRAMP1Q96RY5 1269 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 STRBPQ96SI9 672 aaKnown RBP14.24□□□□□ -0.13
TPM3-202ENST00000302206 AGXT2Q9BYV1 514 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 LAMA4Q16363 1823 aa14.24□□□□□ -0.13
TPM3-202ENST00000302206 XDHP47989 1333 aa14.23□□□□□ -0.13
TPM3-202ENST00000302206 HIBADHP31937 336 aaKnown RBP14.23□□□□□ -0.13
TPM3-202ENST00000302206 ME3Q16798 604 aa14.23□□□□□ -0.13
TPM3-202ENST00000302206 AIDAQ96BJ3 306 aa14.23□□□□□ -0.13
TPM3-202ENST00000302206 LRP2BPQ9P2M1 347 aa14.23□□□□□ -0.13
TPM3-202ENST00000302206 TPCN1Q9ULQ1 816 aa14.23□□□□□ -0.13
TPM3-202ENST00000302206 SMC3Q9UQE7 1217 aa14.23□□□□□ -0.13
TPM3-202ENST00000302206 ZDHHC9Q9Y397 364 aa14.23□□□□□ -0.13
TPM3-202ENST00000302206 COL1A1P02452 1464 aaPredicted RBP14.23□□□□□ -0.13
TPM3-202ENST00000302206 WDR33Q9C0J8 1336 aaKnown RBP14.22□□□□□ -0.13
TPM3-202ENST00000302206 LRRC37AA6NMS7 1700 aa14.22□□□□□ -0.13
TPM3-202ENST00000302206 PATL2C9JE40 543 aaKnown RBP14.22□□□□□ -0.13
TPM3-202ENST00000302206 GOLGA6L22H0YM25 854 aa14.22□□□□□ -0.13
TPM3-202ENST00000302206 BAG4O95429 457 aaKnown RBP14.22□□□□□ -0.13
TPM3-202ENST00000302206 LARGE1O95461 756 aa14.22□□□□□ -0.13
TPM3-202ENST00000302206 CHMP4CQ96CF2 233 aa14.22□□□□□ -0.13
TPM3-202ENST00000302206 DUOX1Q9NRD9 1551 aa14.22□□□□□ -0.13
TPM3-202ENST00000302206 ZNF213O14771 459 aa14.21□□□□□ -0.13
TPM3-202ENST00000302206 ATP2B4P23634 1241 aa14.21□□□□□ -0.13
TPM3-202ENST00000302206 SKOR2Q2VWA4 1001 aaPredicted RBP14.21□□□□□ -0.13
TPM3-202ENST00000302206 TTLL5Q6EMB2 1281 aa14.21□□□□□ -0.13
TPM3-202ENST00000302206 Q6ZUG5 572 aa14.21□□□□□ -0.13
TPM3-202ENST00000302206 BRIP1Q9BX63 1249 aa14.21□□□□□ -0.13
TPM3-202ENST00000302206 PODXL2Q9NZ53 605 aa14.21□□□□□ -0.13
TPM3-202ENST00000302206 MAST2Q6P0Q8 1798 aa14.21□□□□□ -0.13
TPM3-202ENST00000302206 MYH13Q9UKX3 1938 aa14.21□□□□□ -0.14
TPM3-202ENST00000302206 SALL1Q9NSC2 1324 aa14.2□□□□□ -0.14
TPM3-202ENST00000302206 MBD4O95243 580 aa14.2□□□□□ -0.14
TPM3-202ENST00000302206 EVCP57679 992 aa14.2□□□□□ -0.14
TPM3-202ENST00000302206 ST3GAL1Q11201 340 aa14.2□□□□□ -0.14
TPM3-202ENST00000302206 COL13A1Q5TAT6 717 aaPredicted RBP14.2□□□□□ -0.14
TPM3-202ENST00000302206 CCDC83Q8IWF9 413 aa14.2□□□□□ -0.14
TPM3-202ENST00000302206 CACNA1SQ13698 1873 aa14.19□□□□□ -0.14
TPM3-202ENST00000302206 TIAM2Q8IVF5 1701 aa14.19□□□□□ -0.14
TPM3-202ENST00000302206 KIAA1551Q9HCM1 1747 aa14.19□□□□□ -0.14
TPM3-202ENST00000302206 WTIPA6NIX2 430 aaPredicted RBP14.19□□□□□ -0.14
TPM3-202ENST00000302206 CYP7A1P22680 504 aa14.19□□□□□ -0.14
TPM3-202ENST00000302206 PKP1Q13835 747 aa14.19□□□□□ -0.14
TPM3-202ENST00000302206 COL9A3Q14050 684 aaPredicted RBP14.19□□□□□ -0.14
TPM3-202ENST00000302206 SPTY2D1Q68D10 685 aaPredicted RBP14.19□□□□□ -0.14
TPM3-202ENST00000302206 MB21D2Q8IYB1 491 aaPredicted RBP14.19□□□□□ -0.14
TPM3-202ENST00000302206 TNS4Q8IZW8 715 aa14.19□□□□□ -0.14
TPM3-202ENST00000302206 NCOA7Q8NI08 942 aa14.19□□□□□ -0.14
TPM3-202ENST00000302206 LLPHQ9BRT6 129 aaKnown RBP14.19□□□□□ -0.14
TPM3-202ENST00000302206 NACAP1Q9BZK3 213 aa14.19□□□□□ -0.14
TPM3-202ENST00000302206 RAI14Q9P0K7 980 aa14.19□□□□□ -0.14
TPM3-202ENST00000302206 ANKIB1Q9P2G1 1089 aa14.19□□□□□ -0.14
TPM3-202ENST00000302206 ANKRD31Q8N7Z5 1873 aa14.18□□□□□ -0.14
TPM3-202ENST00000302206 A0A0G2JLW4 131 aa14.18□□□□□ -0.14
TPM3-202ENST00000302206 TRAK2O60296 914 aa14.18□□□□□ -0.14
TPM3-202ENST00000302206 PFKFB2O60825 505 aa14.18□□□□□ -0.14
TPM3-202ENST00000302206 PDCP20941 246 aa14.18□□□□□ -0.14
TPM3-202ENST00000302206 KLRK1P26718 216 aa14.18□□□□□ -0.14
TPM3-202ENST00000302206 MCM5P33992 734 aa14.18□□□□□ -0.14
TPM3-202ENST00000302206 SAMD1Q6SPF0 538 aaPredicted RBP14.18□□□□□ -0.14
TPM3-202ENST00000302206 ZNF804AQ7Z570 1209 aa14.18□□□□□ -0.14
TPM3-202ENST00000302206 IFNL3Q8IZI9 196 aa14.18□□□□□ -0.14
TPM3-202ENST00000302206 TDRD7Q8NHU6 1098 aaKnown RBP14.18□□□□□ -0.14
TPM3-202ENST00000302206 WDR66Q8TBY9 1149 aa14.18□□□□□ -0.14
TPM3-202ENST00000302206 GTF3C6Q969F1 213 aa14.18□□□□□ -0.14
TPM3-202ENST00000302206 KLRG1Q96E93 195 aa14.18□□□□□ -0.14
TPM3-202ENST00000302206 ZNF274Q96GC6 653 aaPredicted RBP14.18□□□□□ -0.14
TPM3-202ENST00000302206 LARP6Q9BRS8 491 aaKnown RBP14.18□□□□□ -0.14
TPM3-202ENST00000302206 MAGEB6P1A0A0J9YX57 407 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 GSG1L2A8MUP6 293 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 STX6O43752 255 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 APPP05067 770 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 NPR1P16066 1061 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 GJB2P29033 226 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 PDE6BP35913 854 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 PRELPP51888 382 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 GPSM2P81274 684 aa14.17□□□□□ -0.14
TPM3-202ENST00000302206 FGD1P98174 961 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms