RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 C8orf74Q6P047 294 aa12.67□□□□□ -0.38
GCN1-201ENST00000300648 BABAM1Q9NWV8 329 aa12.67□□□□□ -0.38
GCN1-201ENST00000300648 HVCN1Q96D96 273 aa12.67□□□□□ -0.38
GCN1-201ENST00000300648 TRPM2O94759 1503 aa12.67□□□□□ -0.38
GCN1-201ENST00000300648 ATP2C2O75185 946 aa12.67□□□□□ -0.38
GCN1-201ENST00000300648 MCMDC2Q4G0Z9 681 aa12.67□□□□□ -0.38
GCN1-201ENST00000300648 LARSQ9P2J5 1176 aaKnown RBP12.67□□□□□ -0.38
GCN1-201ENST00000300648 INSRP06213 1382 aa12.67□□□□□ -0.38
GCN1-201ENST00000300648 KRBA2Q6ZNG9 492 aa12.67□□□□□ -0.38
GCN1-201ENST00000300648 RNF10Q8N5U6 811 aaKnown RBP12.67□□□□□ -0.38
GCN1-201ENST00000300648 MYRIPQ8NFW9 859 aa12.67□□□□□ -0.38
GCN1-201ENST00000300648 FAM169AQ9Y6X4 670 aa12.67□□□□□ -0.38
GCN1-201ENST00000300648 DNAJC8O75937 253 aaPredicted RBP12.67□□□□□ -0.38
GCN1-201ENST00000300648 PAK2Q13177 524 aa12.67□□□□□ -0.38
GCN1-201ENST00000300648 MAK16Q9BXY0 300 aaKnown RBP12.67□□□□□ -0.38
GCN1-201ENST00000300648 DACT1Q9NYF0 836 aa12.67□□□□□ -0.38
GCN1-201ENST00000300648 SAMM50Q9Y512 469 aa12.67□□□□□ -0.38
GCN1-201ENST00000300648 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
GCN1-201ENST00000300648 PHACTR2O75167 634 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 FAM160A1Q05DH4 1040 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.66□□□□□ -0.38
GCN1-201ENST00000300648 HAUS8Q9BT25 410 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 FRMD4BQ9Y2L6 1034 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 UGGT2Q9NYU1 1516 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 HOXA7P31268 230 aaPredicted RBP12.66□□□□□ -0.38
GCN1-201ENST00000300648 TMEM87AQ8NBN3 555 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 KRT2P35908 639 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 CCDC122Q5T0U0 273 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 PHLDB3Q6NSJ2 640 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 MAIP1Q8WWC4 291 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 ESYT1Q9BSJ8 1104 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 GOLGA6BA6NDN3 693 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 ERCC5P28715 1186 aaPredicted RBP12.66□□□□□ -0.38
GCN1-201ENST00000300648 PLCD1P51178 756 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 ARL1P40616 181 aaPredicted RBP12.66□□□□□ -0.38
GCN1-201ENST00000300648 EVCP57679 992 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 ATP2A3Q93084 1043 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 NOX5Q96PH1 765 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 GUCA1BQ9UMX6 200 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 CNPY2Q9Y2B0 182 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 AOX1Q06278 1338 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 ABCC10Q5T3U5 1492 aa12.66□□□□□ -0.38
GCN1-201ENST00000300648 UBLCP1Q8WVY7 318 aaPredicted RBP12.66□□□□□ -0.38
GCN1-201ENST00000300648 CNNM4Q6P4Q7 775 aa12.65□□□□□ -0.38
GCN1-201ENST00000300648 MED4Q9NPJ6 270 aa12.65□□□□□ -0.38
GCN1-201ENST00000300648 TFIP11Q9UBB9 837 aaKnown RBP12.65□□□□□ -0.38
GCN1-201ENST00000300648 MAP2K2P36507 400 aa12.65□□□□□ -0.38
GCN1-201ENST00000300648 GUCY1B3Q02153 619 aa12.65□□□□□ -0.38
GCN1-201ENST00000300648 BRD3Q15059 726 aa12.65□□□□□ -0.38
GCN1-201ENST00000300648 NBPF6Q5VWK0 638 aa12.65□□□□□ -0.38
GCN1-201ENST00000300648 NBPF4Q96M43 638 aa12.65□□□□□ -0.38
GCN1-201ENST00000300648 CCT6BQ92526 530 aa12.65□□□□□ -0.38
GCN1-201ENST00000300648 EIF4G3O43432 1585 aaKnown RBP12.65□□□□□ -0.38
GCN1-201ENST00000300648 PLXNC1O60486 1568 aa12.65□□□□□ -0.38
GCN1-201ENST00000300648 ARHGAP6O43182 974 aa12.65□□□□□ -0.38
GCN1-201ENST00000300648 ZNF569Q5MCW4 686 aa12.65□□□□□ -0.38
GCN1-201ENST00000300648 KRT79Q5XKE5 535 aa12.65□□□□□ -0.38
GCN1-201ENST00000300648 EVI5O60447 810 aa12.65□□□□□ -0.38
GCN1-201ENST00000300648 HSP90AA5PQ58FG0 334 aa12.65□□□□□ -0.38
GCN1-201ENST00000300648 GOLGA8QA0A0J9YX86 632 aa12.65□□□□□ -0.39
GCN1-201ENST00000300648 GOLGA8OA6NCC3 632 aa12.65□□□□□ -0.39
GCN1-201ENST00000300648 GOLGA8NF8WBI6 632 aa12.65□□□□□ -0.39
GCN1-201ENST00000300648 MGEA5O60502 916 aa12.65□□□□□ -0.39
GCN1-201ENST00000300648 ALDH1L1O75891 902 aa12.65□□□□□ -0.39
GCN1-201ENST00000300648 PPP2R5BQ15173 497 aa12.65□□□□□ -0.39
GCN1-201ENST00000300648 TMTC1Q8IUR5 882 aa12.65□□□□□ -0.39
GCN1-201ENST00000300648 P3H4Q92791 437 aa12.65□□□□□ -0.39
GCN1-201ENST00000300648 KLF18A0A0U1RQI7 1052 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 RAB17Q9H0T7 212 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 RAB11FIP4Q86YS3 637 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 EPSTI1Q96J88 318 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 PHF23Q9BUL5 403 aaPredicted RBP12.64□□□□□ -0.39
GCN1-201ENST00000300648 EEF2P13639 858 aaKnown RBP12.64□□□□□ -0.39
GCN1-201ENST00000300648 SDCCAG8Q86SQ7 713 aaPredicted RBP12.64□□□□□ -0.39
GCN1-201ENST00000300648 KCNK9Q9NPC2 374 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 UHRF1BP1LA0JNW5 1464 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 GIPC1O14908 333 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 TSPY3P0CV98 308 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 TSPY8P0CW00 308 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 GKAP1Q5VSY0 366 aaPredicted RBP12.64□□□□□ -0.39
GCN1-201ENST00000300648 IFNL2Q8IZJ0 200 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 CCDC51Q96ER9 411 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 PLCB3Q01970 1234 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 MYD88Q99836 296 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 DNAJC25Q9H1X3 360 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 BICRAQ9NZM4 1560 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 SPDYE3A6NKU9 549 aa12.64□□□□□ -0.39
GCN1-201ENST00000300648 DDX54Q8TDD1 881 aaKnown RBP12.64□□□□□ -0.39
GCN1-201ENST00000300648 FAM13AO94988 1023 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 LIN9Q5TKA1 542 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 RGS22Q8NE09 1264 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 IFT81Q8WYA0 676 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 SMARCA5O60264 1052 aaPredicted RBP12.63□□□□□ -0.39
GCN1-201ENST00000300648 EPB41P11171 864 aaKnown RBP12.63□□□□□ -0.39
GCN1-201ENST00000300648 MYCBPQ99417 103 aaPredicted RBP12.63□□□□□ -0.39
GCN1-201ENST00000300648 URB2Q14146 1524 aaKnown RBP12.63□□□□□ -0.39
GCN1-201ENST00000300648 SLC8A3P57103 927 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 APBA1Q02410 837 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 CCDC84Q86UT8 332 aaPredicted RBP12.63□□□□□ -0.39
GCN1-201ENST00000300648 CCDC65Q8IXS2 484 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms