RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 RIC3Q7Z5B4 369 aa12.6□□□□□ -0.39
SNX20-201ENST00000300590 HINFPQ9BQA5 517 aa12.6□□□□□ -0.39
SNX20-201ENST00000300590 AKAP2Q9Y2D5 859 aa12.6□□□□□ -0.39
SNX20-201ENST00000300590 KIF28PB7ZC32 967 aa12.6□□□□□ -0.39
SNX20-201ENST00000300590 EIF3JO75822 258 aaKnown RBP12.6□□□□□ -0.39
SNX20-201ENST00000300590 PIP4K2AP48426 406 aaPredicted RBP12.6□□□□□ -0.39
SNX20-201ENST00000300590 PDE4BQ07343 736 aa12.6□□□□□ -0.39
SNX20-201ENST00000300590 EPHA10Q5JZY3 1008 aa12.6□□□□□ -0.39
SNX20-201ENST00000300590 BEND6Q5SZJ8 279 aaPredicted RBP12.6□□□□□ -0.39
SNX20-201ENST00000300590 ANO1Q5XXA6 986 aa12.6□□□□□ -0.39
SNX20-201ENST00000300590 KSR2Q6VAB6 950 aa12.6□□□□□ -0.39
SNX20-201ENST00000300590 TMEM139Q8IV31 216 aa12.6□□□□□ -0.39
SNX20-201ENST00000300590 SLC26A8Q96RN1 970 aa12.6□□□□□ -0.39
SNX20-201ENST00000300590 BPIFA3Q9BQP9 254 aa12.6□□□□□ -0.39
SNX20-201ENST00000300590 INTS13Q9NVM9 706 aa12.6□□□□□ -0.39
SNX20-201ENST00000300590 E7EWF7 191 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 RXRAP19793 462 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 CTR9Q6PD62 1173 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 ANKZF1Q9H8Y5 726 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 MLH3Q9UHC1 1453 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 MROH7-TTC4A0A0A0MT08 1334 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 NEDD4P46934 1319 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 XRN1Q8IZH2 1706 aaKnown RBP12.59□□□□□ -0.39
SNX20-201ENST00000300590 CDC27P30260 824 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 BRD3Q15059 726 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 KIFC2Q96AC6 838 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 FAM204AQ9H8W3 233 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 PCDHA5Q9Y5H7 936 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 PLEKHG2Q9H7P9 1386 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 MAP2K7O14733 419 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 IKBKBO14920 756 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 CUTAO60888 179 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 ERLIN1O75477 346 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 VSNL1P62760 191 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 DHX8Q14562 1220 aaKnown RBP12.59□□□□□ -0.39
SNX20-201ENST00000300590 ATL3Q6DD88 541 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 PLPPR3Q6T4P5 718 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 SRGAP1Q7Z6B7 1085 aa12.59□□□□□ -0.39
SNX20-201ENST00000300590 PATL2C9JE40 543 aaKnown RBP12.58□□□□□ -0.4
SNX20-201ENST00000300590 ZNF609O15014 1411 aa12.58□□□□□ -0.4
SNX20-201ENST00000300590 LONRF3Q496Y0 759 aa12.58□□□□□ -0.4
SNX20-201ENST00000300590 LRRC31Q6UY01 552 aa12.58□□□□□ -0.4
SNX20-201ENST00000300590 TC2NQ8N9U0 490 aa12.58□□□□□ -0.4
SNX20-201ENST00000300590 PSD3Q9NYI0 1048 aa12.58□□□□□ -0.4
SNX20-201ENST00000300590 NFE2L3Q9Y4A8 694 aa12.58□□□□□ -0.4
SNX20-201ENST00000300590 KLF18A0A0U1RQI7 1052 aa12.58□□□□□ -0.4
SNX20-201ENST00000300590 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
SNX20-201ENST00000300590 ATP2B1P20020 1258 aa12.58□□□□□ -0.4
SNX20-201ENST00000300590 AKAP17AQ02040 695 aaKnown RBP12.58□□□□□ -0.4
SNX20-201ENST00000300590 CASP8Q14790 479 aa12.58□□□□□ -0.4
SNX20-201ENST00000300590 AXDND1Q5T1B0 1012 aaPredicted RBP12.58□□□□□ -0.4
SNX20-201ENST00000300590 KLHL10Q6JEL2 608 aa12.58□□□□□ -0.4
SNX20-201ENST00000300590 MYCBPQ99417 103 aaPredicted RBP12.58□□□□□ -0.4
SNX20-201ENST00000300590 GOLGA8BA8MQT2 603 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 HOXC9P31274 260 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 HSP90AB3PQ58FF7 597 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 FOXP4Q8IVH2 680 aaPredicted RBP12.57□□□□□ -0.4
SNX20-201ENST00000300590 RIN2Q8WYP3 895 aaPredicted RBP12.57□□□□□ -0.4
SNX20-201ENST00000300590 SIRT1Q96EB6 747 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 TMEM131LA2VDJ0 1609 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 KIF5CO60282 957 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 HMGB1P09429 215 aaKnown RBP12.57□□□□□ -0.4
SNX20-201ENST00000300590 CMA1P23946 247 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 GUCY2CP25092 1073 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 CDC5LQ99459 802 aaKnown RBP12.57□□□□□ -0.4
SNX20-201ENST00000300590 SNRKQ9NRH2 765 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 SBNO1A3KN83 1393 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 DLC1Q96QB1 1528 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 GOLGA6L9A6NEM1 432 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 STX10O60499 249 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 YEATS4O95619 227 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 CCDC175P0C221 793 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 LIG3P49916 1009 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 SPECC1LQ69YQ0 1117 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 BANK1Q8NDB2 785 aa12.57□□□□□ -0.4
SNX20-201ENST00000300590 SAMSN1Q9NSI8 373 aaKnown RBP12.57□□□□□ -0.4
SNX20-201ENST00000300590 CLGNO14967 610 aa12.56□□□□□ -0.4
SNX20-201ENST00000300590 ABL1P00519 1130 aa12.56□□□□□ -0.4
SNX20-201ENST00000300590 STX17P56962 302 aa12.56□□□□□ -0.4
SNX20-201ENST00000300590 TNNI3KQ59H18 835 aa12.56□□□□□ -0.4
SNX20-201ENST00000300590 ZNF530Q6P9A1 599 aaPredicted RBP12.56□□□□□ -0.4
SNX20-201ENST00000300590 GRAMD1CQ8IYS0 662 aa12.56□□□□□ -0.4
SNX20-201ENST00000300590 GEMIN8Q9NWZ8 242 aaKnown RBP12.56□□□□□ -0.4
SNX20-201ENST00000300590 L1RE1Q9UN81 338 aa12.56□□□□□ -0.4
SNX20-201ENST00000300590 FPGT-TNNI3KV9GXZ4 949 aa12.56□□□□□ -0.4
SNX20-201ENST00000300590 KDRP35968 1356 aa12.56□□□□□ -0.4
SNX20-201ENST00000300590 ZMYND10O75800 440 aa12.56□□□□□ -0.4
SNX20-201ENST00000300590 TIMM10P62072 90 aa12.56□□□□□ -0.4
SNX20-201ENST00000300590 LINS1Q8NG48 757 aa12.56□□□□□ -0.4
SNX20-201ENST00000300590 PPM1EQ8WY54 764 aa12.56□□□□□ -0.4
SNX20-201ENST00000300590 POLR3EQ9NVU0 708 aa12.56□□□□□ -0.4
SNX20-201ENST00000300590 COBLO75128 1261 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 ATP5JP18859 108 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 EXOSC10Q01780 885 aaKnown RBP12.55□□□□□ -0.4
SNX20-201ENST00000300590 SHC4Q6S5L8 630 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 MYD88Q99836 296 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 CDC23Q9UJX2 597 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 OVOS2A0A0J9YW53 1432 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 OVOS2Q6IE36 1432 aa12.55□□□□□ -0.4
SNX20-201ENST00000300590 PXDNLA1KZ92 1463 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms