RNA–Protein interactions for RNA: ENST00000300213.8

CCNDBP1-201, Transcript of cyclin D1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNDBP1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-201ENST00000300213 PCDHA5Q9Y5H7 936 aa16.82■□□□□ 0.28
CCNDBP1-201ENST00000300213 PRAMEF22A3QJZ6 481 aa16.82■□□□□ 0.28
CCNDBP1-201ENST00000300213 TFCP2Q12800 502 aa16.82■□□□□ 0.28
CCNDBP1-201ENST00000300213 STOX1Q6ZVD7 989 aa16.82■□□□□ 0.28
CCNDBP1-201ENST00000300213 PFKFB2O60825 505 aa16.82■□□□□ 0.28
CCNDBP1-201ENST00000300213 NEXNQ0ZGT2 675 aa16.82■□□□□ 0.28
CCNDBP1-201ENST00000300213 MYSM1Q5VVJ2 828 aa16.82■□□□□ 0.28
CCNDBP1-201ENST00000300213 NFXL1Q6ZNB6 911 aa16.82■□□□□ 0.28
CCNDBP1-201ENST00000300213 SLC35F6Q8N357 371 aa16.82■□□□□ 0.28
CCNDBP1-201ENST00000300213 CEP112Q8N8E3 955 aa16.82■□□□□ 0.28
CCNDBP1-201ENST00000300213 YEATS2Q9ULM3 1422 aa16.82■□□□□ 0.28
CCNDBP1-201ENST00000300213 NCAPHQ15003 741 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 CT47A1Q5JQC4 288 aaPredicted RBP16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 NBPF6Q5VWK0 638 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 NBPF4Q96M43 638 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 NRXN1Q9ULB1 1477 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 EBAG9O00559 213 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 ADCY9O60503 1353 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 AFMP43652 599 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 TRIM29Q14134 588 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 SPECC1LQ69YQ0 1117 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 EDC4Q6P2E9 1401 aaKnown RBP16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 LRRC31Q6UY01 552 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 VWDEQ8N2E2 1590 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 CRB1P82279 1406 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 ZEB2O60315 1214 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 RNF187Q5TA31 235 aaPredicted RBP16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 GPIHBP1Q8IV16 184 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 IL17RAQ96F46 866 aa16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 SAMSN1Q9NSI8 373 aaKnown RBP16.81■□□□□ 0.28
CCNDBP1-201ENST00000300213 MAP2P11137 1827 aaKnown RBP16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 GRM8O00222 908 aa16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 CUTAO60888 179 aa16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 GIGYF1O75420 1035 aaPredicted RBP16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 ECM2O94769 699 aaPredicted RBP16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 PDIA3P30101 505 aaKnown RBP16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 RDXP35241 583 aaKnown RBP16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 CCT6AP40227 531 aaKnown RBP16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 ACRBPQ8NEB7 543 aa16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 ZNF330Q9Y3S2 320 aaPredicted RBP16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 ATP7BP35670 1465 aa16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 CCDC85AQ96PX6 553 aaPredicted RBP16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 ATP5J2-PTCD1G3V325 749 aa16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 PTCD1O75127 700 aaKnown RBP16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 TRDNQ13061 729 aa16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 KLHL34Q8N239 644 aa16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 CCDC148Q8NFR7 591 aa16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 SIRT1Q96EB6 747 aa16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 GBP3Q9H0R5 595 aa16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 GEMIN8Q9NWZ8 242 aaKnown RBP16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 SETBP1Q9Y6X0 1596 aa16.8■□□□□ 0.28
CCNDBP1-201ENST00000300213 EFCAB6Q5THR3 1501 aa16.79■□□□□ 0.28
CCNDBP1-201ENST00000300213 ATP2B2Q01814 1243 aa16.79■□□□□ 0.28
CCNDBP1-201ENST00000300213 MICU3Q86XE3 530 aa16.79■□□□□ 0.28
CCNDBP1-201ENST00000300213 IGSF22Q8N9C0 903 aa16.79■□□□□ 0.28
CCNDBP1-201ENST00000300213 GIMAP7Q8NHV1 300 aa16.79■□□□□ 0.28
CCNDBP1-201ENST00000300213 JPH2Q9BR39 696 aaPredicted RBP16.79■□□□□ 0.28
CCNDBP1-201ENST00000300213 MKRN1Q9UHC7 482 aaKnown RBP16.79■□□□□ 0.28
CCNDBP1-201ENST00000300213 SSBP05455 408 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCNDBP1-201ENST00000300213 BEND6Q5SZJ8 279 aaPredicted RBP16.79■□□□□ 0.28
CCNDBP1-201ENST00000300213 PHKBQ93100 1093 aa16.79■□□□□ 0.28
CCNDBP1-201ENST00000300213 MYD88Q99836 296 aa16.79■□□□□ 0.28
CCNDBP1-201ENST00000300213 RTEL1Q9NZ71 1219 aa16.79■□□□□ 0.28
CCNDBP1-201ENST00000300213 AKR1B15C9JRZ8 316 aaPredicted RBP16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 TIMM10P62072 90 aa16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 TADA2BQ86TJ2 420 aa16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 JMYQ8N9B5 988 aa16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 NUP88Q99567 741 aaPredicted RBP16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 SLF1Q9BQI6 1058 aa16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 CDC23Q9UJX2 597 aa16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 DEPDC5O75140 1603 aa16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 ZNF530Q6P9A1 599 aaPredicted RBP16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 RUFY1Q96T51 708 aa16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 PATL2C9JE40 543 aaKnown RBP16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 E7EWF7 191 aa16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 KIAA0754O94854 1291 aa16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 DNA2P51530 1060 aa16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 NOA1Q8NC60 698 aaKnown RBP16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 BCAS4Q8TDM0 211 aa16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 STAMQ92783 540 aa16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 EHD4Q9H223 541 aa16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 DBF4Q9UBU7 674 aaPredicted RBP16.78■□□□□ 0.28
CCNDBP1-201ENST00000300213 SHTN1A0MZ66 631 aa16.77■□□□□ 0.28
CCNDBP1-201ENST00000300213 ATP2C2O75185 946 aa16.77■□□□□ 0.28
CCNDBP1-201ENST00000300213 ILDR1Q86SU0 546 aaPredicted RBP16.77■□□□□ 0.28
CCNDBP1-201ENST00000300213 ALG1Q9BT22 464 aa16.77■□□□□ 0.28
CCNDBP1-201ENST00000300213 ADGRB3O60242 1522 aa16.77■□□□□ 0.28
CCNDBP1-201ENST00000300213 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.28
CCNDBP1-201ENST00000300213 ZCCHC11Q5TAX3 1644 aaKnown RBP16.77■□□□□ 0.28
CCNDBP1-201ENST00000300213 HMGB1P09429 215 aaKnown RBP16.77■□□□□ 0.28
CCNDBP1-201ENST00000300213 PDE4BQ07343 736 aa16.77■□□□□ 0.28
CCNDBP1-201ENST00000300213 RSRC2Q7L4I2 434 aaKnown RBP16.77■□□□□ 0.28
CCNDBP1-201ENST00000300213 LLPHQ9BRT6 129 aaKnown RBP16.77■□□□□ 0.28
CCNDBP1-201ENST00000300213 DBNLQ9UJU6 430 aaKnown RBP16.77■□□□□ 0.28
CCNDBP1-201ENST00000300213 CAPN7Q9Y6W3 813 aa16.77■□□□□ 0.28
CCNDBP1-201ENST00000300213 STX10O60499 249 aa16.77■□□□□ 0.27
CCNDBP1-201ENST00000300213 DDX58O95786 925 aaKnown RBP16.77■□□□□ 0.27
CCNDBP1-201ENST00000300213 UBE3BQ7Z3V4 1068 aa16.77■□□□□ 0.27
CCNDBP1-201ENST00000300213 ANKZF1Q9H8Y5 726 aa16.77■□□□□ 0.27
CCNDBP1-201ENST00000300213 BRMS1Q9HCU9 246 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms