RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 CYP7A1P22680 504 aa29.53■■■□□ 2.32
GTF2A1-201ENST00000298173 ADGRA1Q86SQ6 560 aa29.53■■■□□ 2.32
GTF2A1-201ENST00000298173 FOXP2O15409 715 aa29.53■■■□□ 2.32
GTF2A1-201ENST00000298173 GTF2IP78347 998 aa29.53■■■□□ 2.32
GTF2A1-201ENST00000298173 GRIK5Q16478 980 aa29.53■■■□□ 2.32
GTF2A1-201ENST00000298173 AOC3Q16853 763 aa29.53■■■□□ 2.32
GTF2A1-201ENST00000298173 STRBPQ96SI9 672 aaKnown RBP29.53■■■□□ 2.32
GTF2A1-201ENST00000298173 DBNDD1Q9H9R9 158 aa29.53■■■□□ 2.32
GTF2A1-201ENST00000298173 MAST2Q6P0Q8 1798 aa29.53■■■□□ 2.32
GTF2A1-201ENST00000298173 LDHBP07195 334 aaKnown RBP29.52■■■□□ 2.32
GTF2A1-201ENST00000298173 NAA16Q6N069 864 aaPredicted RBP29.52■■■□□ 2.32
GTF2A1-201ENST00000298173 G3V3G9 751 aa29.51■■■□□ 2.31
GTF2A1-201ENST00000298173 DCAF8Q5TAQ9 597 aa29.51■■■□□ 2.31
GTF2A1-201ENST00000298173 TTLL5Q6EMB2 1281 aa29.51■■■□□ 2.31
GTF2A1-201ENST00000298173 SCN9AQ15858 1988 aa29.51■■■□□ 2.31
GTF2A1-201ENST00000298173 GOLGB1Q14789 3259 aaKnown RBP29.51■■■□□ 2.31
GTF2A1-201ENST00000298173 MFSD14BQ5SR56 506 aa29.5■■■□□ 2.31
GTF2A1-201ENST00000298173 ARFGEF1Q9Y6D6 1849 aa29.5■■■□□ 2.31
GTF2A1-201ENST00000298173 PPIP5K2O43314 1243 aa29.5■■■□□ 2.31
GTF2A1-201ENST00000298173 ECE2O60344 883 aa29.5■■■□□ 2.31
GTF2A1-201ENST00000298173 RASEFQ8IZ41 740 aa29.5■■■□□ 2.31
GTF2A1-201ENST00000298173 AIDAQ96BJ3 306 aa29.5■■■□□ 2.31
GTF2A1-201ENST00000298173 U3KPZ7 1027 aaPredicted RBP29.5■■■□□ 2.31
GTF2A1-201ENST00000298173 KCNQ5Q9NR82 932 aa29.49■■■□□ 2.31
GTF2A1-201ENST00000298173 BCS1LQ9Y276 419 aa29.49■■■□□ 2.31
GTF2A1-201ENST00000298173 SUGT1Q9Y2Z0 365 aa29.49■■■□□ 2.31
GTF2A1-201ENST00000298173 ZNF646O15015 1829 aaPredicted RBP29.49■■■□□ 2.31
GTF2A1-201ENST00000298173 CREB3L3Q68CJ9 461 aa29.48■■■□□ 2.31
GTF2A1-201ENST00000298173 RIOK1Q9BRS2 568 aaKnown RBP29.48■■■□□ 2.31
GTF2A1-201ENST00000298173 SNX14Q9Y5W7 946 aa29.48■■■□□ 2.31
GTF2A1-201ENST00000298173 MBD4O95243 580 aa29.47■■■□□ 2.31
GTF2A1-201ENST00000298173 FHDC1Q9C0D6 1143 aaPredicted RBP29.47■■■□□ 2.31
GTF2A1-201ENST00000298173 SLC27A2O14975 620 aa29.47■■■□□ 2.31
GTF2A1-201ENST00000298173 STRIP1Q5VSL9 837 aa29.47■■■□□ 2.31
GTF2A1-201ENST00000298173 DZIP1Q86YF9 867 aaKnown RBP29.47■■■□□ 2.31
GTF2A1-201ENST00000298173 CERS5Q8N5B7 392 aa29.47■■■□□ 2.31
GTF2A1-201ENST00000298173 MIGA1Q8NAN2 632 aa29.47■■■□□ 2.31
GTF2A1-201ENST00000298173 ZNF277Q9NRM2 450 aaPredicted RBP29.47■■■□□ 2.31
GTF2A1-201ENST00000298173 FKBP1AP62942 108 aaKnown RBP29.46■■■□□ 2.31
GTF2A1-201ENST00000298173 TSGA10IPQ3SY00 556 aa29.46■■■□□ 2.31
GTF2A1-201ENST00000298173 LCORLQ8N3X6 602 aa29.46■■■□□ 2.31
GTF2A1-201ENST00000298173 ARMT1Q9H993 441 aa29.46■■■□□ 2.31
GTF2A1-201ENST00000298173 RABEP1Q15276 862 aa29.45■■■□□ 2.31
GTF2A1-201ENST00000298173 MYH2Q9UKX2 1941 aa29.45■■■□□ 2.3
GTF2A1-201ENST00000298173 MAGEB6P1A0A0J9YX57 407 aa29.44■■■□□ 2.3
GTF2A1-201ENST00000298173 YDJCA8MPS7 323 aa29.44■■■□□ 2.3
GTF2A1-201ENST00000298173 PATL2C9JE40 543 aaKnown RBP29.44■■■□□ 2.3
GTF2A1-201ENST00000298173 NFKBIEO00221 500 aa29.44■■■□□ 2.3
GTF2A1-201ENST00000298173 FGAP02671 866 aa29.44■■■□□ 2.3
GTF2A1-201ENST00000298173 GSTO1P78417 241 aa29.44■■■□□ 2.3
GTF2A1-201ENST00000298173 FAM163AQ96GL9 167 aaPredicted RBP29.44■■■□□ 2.3
GTF2A1-201ENST00000298173 COL4A5P29400 1685 aa29.44■■■□□ 2.3
GTF2A1-201ENST00000298173 PSME4Q14997 1843 aa29.44■■■□□ 2.3
GTF2A1-201ENST00000298173 GNAT2P19087 354 aa29.44■■■□□ 2.3
GTF2A1-201ENST00000298173 DACT2Q5SW24 774 aa29.44■■■□□ 2.3
GTF2A1-201ENST00000298173 RNF20Q5VTR2 975 aa29.44■■■□□ 2.3
GTF2A1-201ENST00000298173 DDRGK1Q96HY6 314 aa29.44■■■□□ 2.3
GTF2A1-201ENST00000298173 TAOK3Q9H2K8 898 aa29.44■■■□□ 2.3
GTF2A1-201ENST00000298173 ALX1Q15699 326 aa29.43■■■□□ 2.3
GTF2A1-201ENST00000298173 LARGE2Q8N3Y3 721 aa29.43■■■□□ 2.3
GTF2A1-201ENST00000298173 IPO9Q96P70 1041 aaKnown RBP29.43■■■□□ 2.3
GTF2A1-201ENST00000298173 LTBP3Q9NS15 1303 aa29.42■■■□□ 2.3
GTF2A1-201ENST00000298173 USP17L3A6NCW0 530 aa29.42■■■□□ 2.3
GTF2A1-201ENST00000298173 USP17L4A6NCW7 530 aa29.42■■■□□ 2.3
GTF2A1-201ENST00000298173 LDHCP07864 332 aa29.42■■■□□ 2.3
GTF2A1-201ENST00000298173 CYP21A2P08686 494 aa29.42■■■□□ 2.3
GTF2A1-201ENST00000298173 IARSP41252 1262 aaKnown RBP29.42■■■□□ 2.3
GTF2A1-201ENST00000298173 USP17L1Q7RTZ2 530 aa29.42■■■□□ 2.3
GTF2A1-201ENST00000298173 SYT17Q9BSW7 474 aa29.42■■■□□ 2.3
GTF2A1-201ENST00000298173 GSG1L2A8MUP6 293 aa29.41■■■□□ 2.3
GTF2A1-201ENST00000298173 ZKSCAN1P17029 563 aaPredicted RBP29.41■■■□□ 2.3
GTF2A1-201ENST00000298173 DYNLL1P63167 89 aaKnown RBP29.41■■■□□ 2.3
GTF2A1-201ENST00000298173 DIXDC1Q155Q3 683 aa29.41■■■□□ 2.3
GTF2A1-201ENST00000298173 MXD3Q9BW11 206 aa29.41■■■□□ 2.3
GTF2A1-201ENST00000298173 CTNNA3Q9UI47 895 aa29.41■■■□□ 2.3
GTF2A1-201ENST00000298173 RPAP1Q9BWH6 1393 aaPredicted RBP29.41■■■□□ 2.3
GTF2A1-201ENST00000298173 PPP4CP60510 307 aa29.4■■■□□ 2.3
GTF2A1-201ENST00000298173 FBXW7Q969H0 707 aa29.4■■■□□ 2.3
GTF2A1-201ENST00000298173 TAF6LQ9Y6J9 622 aa29.4■■■□□ 2.3
GTF2A1-201ENST00000298173 PRKAB2O43741 272 aa29.4■■■□□ 2.3
GTF2A1-201ENST00000298173 SNX21Q969T3 373 aa29.4■■■□□ 2.3
GTF2A1-201ENST00000298173 MROH7-TTC4A0A0A0MT08 1334 aa29.39■■■□□ 2.3
GTF2A1-201ENST00000298173 ZMYM6O95789 1325 aa29.39■■■□□ 2.3
GTF2A1-201ENST00000298173 ADCK5Q3MIX3 580 aa29.39■■■□□ 2.3
GTF2A1-201ENST00000298173 IFNL3Q8IZI9 196 aa29.39■■■□□ 2.3
GTF2A1-201ENST00000298173 TM6SF1Q9BZW5 370 aa29.39■■■□□ 2.3
GTF2A1-201ENST00000298173 AATFQ9NY61 560 aaKnown RBP eCLIP29.39■■■□□ 2.35e-24■□□□□ 11.1
GTF2A1-201ENST00000298173 SLC4A4Q9Y6R1 1079 aa29.39■■■□□ 2.3
GTF2A1-201ENST00000298173 GAKO14976 1311 aa29.39■■■□□ 2.29
GTF2A1-201ENST00000298173 SLF2Q8IX21 1173 aa29.38■■■□□ 2.29
GTF2A1-201ENST00000298173 EPB41L4AQ9HCS5 686 aaPredicted RBP29.38■■■□□ 2.29
GTF2A1-201ENST00000298173 GPR75-ASB3A0A0A6YYF3 556 aa29.37■■■□□ 2.29
GTF2A1-201ENST00000298173 IL27Q8NEV9 243 aa29.37■■■□□ 2.29
GTF2A1-201ENST00000298173 MRIQ9BWK5 157 aa29.37■■■□□ 2.29
GTF2A1-201ENST00000298173 APPP05067 770 aa29.37■■■□□ 2.29
GTF2A1-201ENST00000298173 ZNRF3Q9ULT6 936 aa29.37■■■□□ 2.29
GTF2A1-201ENST00000298173 TTF2Q9UNY4 1162 aaKnown RBP29.36■■■□□ 2.29
GTF2A1-201ENST00000298173 TBC1D2Q9BYX2 928 aa29.35■■■□□ 2.29
GTF2A1-201ENST00000298173 ZSWIM6Q9HCJ5 1215 aa29.35■■■□□ 2.29
GTF2A1-201ENST00000298173 CD2BP2O95400 341 aaKnown RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms