RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CLIP2Q9UDT6 1046 aa20.17■□□□□ 0.82
CDC42EP3-201ENST00000295324 SPATA31E1Q6ZUB1 1445 aa20.17■□□□□ 0.82
CDC42EP3-201ENST00000295324 B4E1Z4 1266 aa20.17■□□□□ 0.82
CDC42EP3-201ENST00000295324 ANKARQ7Z5J8 1434 aa20.17■□□□□ 0.82
CDC42EP3-201ENST00000295324 GPCPD1Q9NPB8 672 aa20.17■□□□□ 0.82
CDC42EP3-201ENST00000295324 BACH1O14867 736 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 GTPBP4Q9BZE4 634 aaKnown RBP20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 GTF2IP78347 998 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 BRAPQ7Z569 592 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 CCDC66A2RUB6 948 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 PSMA7O14818 248 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 TEKT1Q969V4 418 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 KDRP35968 1356 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 IGSF1Q8N6C5 1336 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 SPTLC2O15270 562 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 SPAG1Q07617 926 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 BRDTQ58F21 947 aaPredicted RBP20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 PUF60Q9UHX1 559 aaKnown RBP20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 ASAP1Q9ULH1 1129 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 ERBB3P21860 1342 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 PHACTR2O75167 634 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 MFSD14BQ5SR56 506 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 SNX21Q969T3 373 aa20.16■□□□□ 0.82
CDC42EP3-201ENST00000295324 PNMA6EA0A0J9YXQ4 647 aa20.15■□□□□ 0.82
CDC42EP3-201ENST00000295324 USP48Q86UV5 1035 aa20.15■□□□□ 0.82
CDC42EP3-201ENST00000295324 THRAP3Q9Y2W1 955 aaKnown RBP20.15■□□□□ 0.82
CDC42EP3-201ENST00000295324 MARCKSP29966 332 aaPredicted RBP20.15■□□□□ 0.82
CDC42EP3-201ENST00000295324 N4BP3O15049 544 aa20.15■□□□□ 0.82
CDC42EP3-201ENST00000295324 ZRSR2Q15696 482 aaKnown RBP20.15■□□□□ 0.82
CDC42EP3-201ENST00000295324 IBTKQ9P2D0 1353 aaPredicted RBP20.15■□□□□ 0.82
CDC42EP3-201ENST00000295324 ANKRD62A6NC57 917 aa20.15■□□□□ 0.82
CDC42EP3-201ENST00000295324 BRINP3Q76B58 766 aa20.15■□□□□ 0.82
CDC42EP3-201ENST00000295324 KDM6BO15054 1643 aa20.14■□□□□ 0.82
CDC42EP3-201ENST00000295324 F13A1P00488 732 aa20.14■□□□□ 0.82
CDC42EP3-201ENST00000295324 GSDMDP57764 484 aa20.14■□□□□ 0.82
CDC42EP3-201ENST00000295324 DTHD1Q6ZMT9 781 aa20.14■□□□□ 0.82
CDC42EP3-201ENST00000295324 ZAP70P43403 619 aa20.14■□□□□ 0.81
CDC42EP3-201ENST00000295324 TTF2Q9UNY4 1162 aaKnown RBP20.14■□□□□ 0.81
CDC42EP3-201ENST00000295324 RXRAP19793 462 aa20.14■□□□□ 0.81
CDC42EP3-201ENST00000295324 CA8P35219 290 aa20.14■□□□□ 0.81
CDC42EP3-201ENST00000295324 ISM2Q6H9L7 571 aa20.14■□□□□ 0.81
CDC42EP3-201ENST00000295324 NEMFO60524 1076 aa20.14■□□□□ 0.81
CDC42EP3-201ENST00000295324 CCDC129Q6ZRS4 1044 aa20.14■□□□□ 0.81
CDC42EP3-201ENST00000295324 FAM13AO94988 1023 aa20.14■□□□□ 0.81
CDC42EP3-201ENST00000295324 IMPG2Q9BZV3 1241 aa20.13■□□□□ 0.81
CDC42EP3-201ENST00000295324 SLC1A4P43007 532 aa20.13■□□□□ 0.81
CDC42EP3-201ENST00000295324 ANGEL1Q9UNK9 670 aaKnown RBP20.13■□□□□ 0.81
CDC42EP3-201ENST00000295324 EAPPQ56P03 285 aaPredicted RBP20.13■□□□□ 0.81
CDC42EP3-201ENST00000295324 HS2ST1Q7LGA3 356 aa20.13■□□□□ 0.81
CDC42EP3-201ENST00000295324 SPAG5Q96R06 1193 aa20.13■□□□□ 0.81
CDC42EP3-201ENST00000295324 TCP10Q12799 353 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 ARHGAP27Q6ZUM4 889 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 MAPKAPK5Q8IW41 473 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 ZNF532Q9HCE3 1301 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 PRDM1O75626 825 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 ARHGAP31Q2M1Z3 1444 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 MCM7P33993 719 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 MAP3K9P80192 1104 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 PRKG1Q13976 671 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 ABCC3O15438 1527 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 ZBED4O75132 1171 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 DEXIO95424 95 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 ATP5JP18859 108 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 PPP2R5BQ15173 497 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 PTPN14Q15678 1187 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 KIF4BQ2VIQ3 1234 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 SEPT12Q8IYM1 358 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 PRR36Q9H6K5 1346 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 ZMYM4Q5VZL5 1548 aa20.12■□□□□ 0.81
CDC42EP3-201ENST00000295324 EIF3JO75822 258 aaKnown RBP20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 PAFAH1B1P43034 410 aa20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 GIGYF2Q6Y7W6 1299 aaKnown RBP20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 USP40Q9NVE5 1235 aa20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 TBC1D5Q92609 795 aa20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 DHX58Q96C10 678 aa20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 GBP2P32456 591 aaPredicted RBP20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 CTAGE1Q96RT6 745 aa20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 CTNNA2P26232 953 aa20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 ZYXQ15942 572 aaKnown RBP20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 INTS4Q96HW7 963 aaKnown RBP20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 USP26Q9BXU7 913 aa20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 TMC4Q7Z404 712 aa20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 TGFBRAP1Q8WUH2 860 aa20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 MMRN2Q9H8L6 949 aa20.11■□□□□ 0.81
CDC42EP3-201ENST00000295324 MACROD2A1Z1Q3 448 aa20.1■□□□□ 0.81
CDC42EP3-201ENST00000295324 RPS6KB1P23443 525 aa20.1■□□□□ 0.81
CDC42EP3-201ENST00000295324 KLHL40Q2TBA0 621 aa20.1■□□□□ 0.81
CDC42EP3-201ENST00000295324 FCHSD1Q86WN1 690 aa20.1■□□□□ 0.81
CDC42EP3-201ENST00000295324 ZBTB1Q9Y2K1 713 aa20.1■□□□□ 0.81
CDC42EP3-201ENST00000295324 SPATA31A3Q5VYP0 1347 aa20.1■□□□□ 0.81
CDC42EP3-201ENST00000295324 SP4Q02446 784 aa20.1■□□□□ 0.81
CDC42EP3-201ENST00000295324 TMC6Q7Z403 805 aa20.1■□□□□ 0.81
CDC42EP3-201ENST00000295324 USP44Q9H0E7 712 aa20.1■□□□□ 0.81
CDC42EP3-201ENST00000295324 CNPY2Q9Y2B0 182 aa20.1■□□□□ 0.81
CDC42EP3-201ENST00000295324 CSADQ9Y600 493 aa20.1■□□□□ 0.81
CDC42EP3-201ENST00000295324 UBXN4Q92575 508 aa20.1■□□□□ 0.81
CDC42EP3-201ENST00000295324 ALS2CR12Q96Q35 445 aa20.1■□□□□ 0.81
CDC42EP3-201ENST00000295324 USP25Q9UHP3 1055 aa20.1■□□□□ 0.81
CDC42EP3-201ENST00000295324 SLC27A2O14975 620 aa20.09■□□□□ 0.81
CDC42EP3-201ENST00000295324 LZTS2Q9BRK4 669 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms