RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 LRRC8AQ8IWT6 810 aa15.41■□□□□ 0.06
KCNIP3-201ENST00000295225 USP54Q70EL1 1684 aa15.41■□□□□ 0.06
KCNIP3-201ENST00000295225 NCAPD2Q15021 1401 aa15.41■□□□□ 0.06
KCNIP3-201ENST00000295225 CCDC69A6NI79 296 aa15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 IDH1O75874 414 aaKnown RBP15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 NCBP1Q09161 790 aaKnown RBP15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 ORC3Q9UBD5 711 aaPredicted RBP15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 ASAP1Q9ULH1 1129 aa15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 AFDNP55196 1824 aaKnown RBP15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 ATP2B1P20020 1258 aa15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 LMOD1P29536 600 aaPredicted RBP15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 MICU3Q86XE3 530 aa15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 CLIC6Q96NY7 704 aa15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 RCOR1Q9UKL0 485 aa15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 SLIT3O75094 1523 aa15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 HLFQ16534 295 aa15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 RBM43Q6ZSC3 357 aaKnown RBP15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 LRRN4CLQ8ND94 238 aa15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 RNF217Q8TC41 542 aa15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 C8orf76Q96K31 380 aa15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 ZKSCAN3Q9BRR0 538 aa15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 ZSCAN16Q9H4T2 348 aaPredicted RBP15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 JCADQ9P266 1359 aa15.4■□□□□ 0.06
KCNIP3-201ENST00000295225 LOC102724159A0A0B4J2E5 919 aa15.39■□□□□ 0.05
KCNIP3-201ENST00000295225 CPLX1O14810 134 aa15.39■□□□□ 0.05
KCNIP3-201ENST00000295225 ATP1A3P13637 1013 aa15.39■□□□□ 0.05
KCNIP3-201ENST00000295225 ANTXR2P58335 489 aa15.39■□□□□ 0.05
KCNIP3-201ENST00000295225 PWP2Q15269 919 aaKnown RBP15.39■□□□□ 0.05
KCNIP3-201ENST00000295225 ARMCX6Q7L4S7 300 aa15.39■□□□□ 0.05
KCNIP3-201ENST00000295225 ENGASEQ8NFI3 743 aa15.39■□□□□ 0.05
KCNIP3-201ENST00000295225 SMIM22K7EJ46 135 aa15.38■□□□□ 0.05
KCNIP3-201ENST00000295225 IL15P40933 162 aaPredicted RBP15.38■□□□□ 0.05
KCNIP3-201ENST00000295225 DNAJC10Q8IXB1 793 aa15.38■□□□□ 0.05
KCNIP3-201ENST00000295225 ZNF513Q8N8E2 541 aaPredicted RBP15.38■□□□□ 0.05
KCNIP3-201ENST00000295225 IFNKQ9P0W0 207 aa15.38■□□□□ 0.05
KCNIP3-201ENST00000295225 IQSEC3Q9UPP2 1182 aaPredicted RBP15.38■□□□□ 0.05
KCNIP3-201ENST00000295225 SH3TC1Q8TE82 1336 aa15.38■□□□□ 0.05
KCNIP3-201ENST00000295225 STX1AQ16623 288 aa15.38■□□□□ 0.05
KCNIP3-201ENST00000295225 ZCRB1Q8TBF4 217 aaKnown RBP15.38■□□□□ 0.05
KCNIP3-201ENST00000295225 HPS5Q9UPZ3 1129 aa15.38■□□□□ 0.05
KCNIP3-201ENST00000295225 ZBTB12Q9Y330 459 aaPredicted RBP15.38■□□□□ 0.05
KCNIP3-201ENST00000295225 B4E1Z4 1266 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 GPAA1O43292 621 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 WDHD1O75717 1129 aaPredicted RBP15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 FAM160A1Q05DH4 1040 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 TMC6Q7Z403 805 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 ALDH8A1Q9H2A2 487 aaPredicted RBP15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 GREM2Q9H772 168 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 LAMA4Q16363 1823 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 GTF2F1P35269 517 aaKnown RBP eCLIP15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 CEP135Q66GS9 1140 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 XPO4Q9C0E2 1151 aaKnown RBP15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 HELLSQ9NRZ9 838 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 CGNQ9P2M7 1197 aaKnown RBP15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 ZNF215Q9UL58 517 aaPredicted RBP15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 MST1RQ04912 1400 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 FOXN1O15353 648 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 MCAMP43121 646 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 RRP12Q5JTH9 1297 aaKnown RBP15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 CCDC158Q5M9N0 1113 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 SLC9C2Q5TAH2 1124 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 CYB5R4Q7L1T6 521 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 DSCC1Q9BVC3 393 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 TOMM22Q9NS69 142 aa15.37■□□□□ 0.05
KCNIP3-201ENST00000295225 METTL24Q5JXM2 366 aa15.36■□□□□ 0.05
KCNIP3-201ENST00000295225 TBC1D10CQ8IV04 446 aa15.36■□□□□ 0.05
KCNIP3-201ENST00000295225 FMR1NBQ8N0W7 255 aaPredicted RBP15.36■□□□□ 0.05
KCNIP3-201ENST00000295225 CCDC112Q8NEF3 446 aa15.36■□□□□ 0.05
KCNIP3-201ENST00000295225 MRPS27Q92552 414 aaKnown RBP15.36■□□□□ 0.05
KCNIP3-201ENST00000295225 MROH7-TTC4A0A0A0MT08 1334 aa15.36■□□□□ 0.05
KCNIP3-201ENST00000295225 LDHAL6AQ6ZMR3 332 aa15.36■□□□□ 0.05
KCNIP3-201ENST00000295225 CADPS2Q86UW7 1296 aa15.36■□□□□ 0.05
KCNIP3-201ENST00000295225 LINC00301Q8NCQ3 95 aa15.36■□□□□ 0.05
KCNIP3-201ENST00000295225 TBC1D2BQ9UPU7 963 aa15.36■□□□□ 0.05
KCNIP3-201ENST00000295225 ZNF142P52746 1687 aaPredicted RBP15.36■□□□□ 0.05
KCNIP3-201ENST00000295225 CDC27P30260 824 aa15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 IMMTQ16891 758 aaKnown RBP15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 SPTY2D1Q68D10 685 aaPredicted RBP15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 RALYLQ86SE5 291 aaKnown RBP15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 NBPF3Q9H094 633 aa15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 ST7Q9NRC1 585 aa15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 TRPM3Q9HCF6 1732 aaPredicted RBP15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 SALL1Q9NSC2 1324 aa15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 SIPA1L3O60292 1781 aaPredicted RBP15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 ADAMTSL3P82987 1691 aa15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 hCG_1642624A0A1W2PR95 340 aa15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 WTIPA6NIX2 430 aaPredicted RBP15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 ZNF213O14771 459 aa15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 CTDSPL2Q05D32 466 aa15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 PNOCQ13519 176 aa15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 ZRSR1Q15695 479 aaKnown RBP15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 NAA16Q6N069 864 aaPredicted RBP15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 DPF2Q92785 391 aa15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 BSDC1Q9NW68 430 aaPredicted RBP15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 CEP83Q9Y592 693 aa15.35■□□□□ 0.05
KCNIP3-201ENST00000295225 CCZ1BP86790 482 aa15.34■□□□□ 0.05
KCNIP3-201ENST00000295225 CCZ1P86791 482 aaPredicted RBP15.34■□□□□ 0.05
KCNIP3-201ENST00000295225 ZNF396Q96N95 335 aaPredicted RBP15.34■□□□□ 0.05
KCNIP3-201ENST00000295225 WWC3Q9ULE0 1092 aa15.34■□□□□ 0.05
KCNIP3-201ENST00000295225 SPTLC2O15270 562 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms