RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 NSFL1CQ9UNZ2 370 aaKnown RBP19.8■□□□□ 0.76
HIF3A-203ENST00000291300 GSG1L2A8MUP6 293 aa19.79■□□□□ 0.76
HIF3A-203ENST00000291300 COL23A1Q86Y22 540 aaPredicted RBP19.79■□□□□ 0.76
HIF3A-203ENST00000291300 ANKRD2Q9GZV1 360 aa19.79■□□□□ 0.76
HIF3A-203ENST00000291300 PPFIA3O75145 1194 aa19.79■□□□□ 0.76
HIF3A-203ENST00000291300 CYP7A1P22680 504 aa19.79■□□□□ 0.76
HIF3A-203ENST00000291300 IFNL3Q8IZI9 196 aa19.79■□□□□ 0.76
HIF3A-203ENST00000291300 GPT2Q8TD30 523 aa19.79■□□□□ 0.76
HIF3A-203ENST00000291300 AKT1S1Q96B36 256 aa19.79■□□□□ 0.76
HIF3A-203ENST00000291300 GNL3LQ9NVN8 582 aaKnown RBP19.79■□□□□ 0.76
HIF3A-203ENST00000291300 RAI14Q9P0K7 980 aa19.79■□□□□ 0.76
HIF3A-203ENST00000291300 MYH13Q9UKX3 1938 aa19.79■□□□□ 0.76
HIF3A-203ENST00000291300 RXRBP28702 533 aa19.78■□□□□ 0.76
HIF3A-203ENST00000291300 HIBADHP31937 336 aaKnown RBP19.78■□□□□ 0.76
HIF3A-203ENST00000291300 CCT2P78371 535 aaKnown RBP19.78■□□□□ 0.76
HIF3A-203ENST00000291300 CRY2Q49AN0 593 aa19.78■□□□□ 0.76
HIF3A-203ENST00000291300 NCOA5Q9HCD5 579 aaKnown RBP19.78■□□□□ 0.76
HIF3A-203ENST00000291300 DDX49Q9Y6V7 483 aaKnown RBP19.78■□□□□ 0.76
HIF3A-203ENST00000291300 PATL2C9JE40 543 aaKnown RBP19.78■□□□□ 0.76
HIF3A-203ENST00000291300 SMIM22K7EJ46 135 aa19.78■□□□□ 0.76
HIF3A-203ENST00000291300 PLSCR1O15162 318 aa19.78■□□□□ 0.76
HIF3A-203ENST00000291300 CTDNEP1O95476 244 aa19.78■□□□□ 0.76
HIF3A-203ENST00000291300 F13A1P00488 732 aa19.78■□□□□ 0.76
HIF3A-203ENST00000291300 VPS37CA5D8V6 355 aaPredicted RBP19.77■□□□□ 0.76
HIF3A-203ENST00000291300 PRC1O43663 620 aa19.77■□□□□ 0.76
HIF3A-203ENST00000291300 PFKFB2O60825 505 aa19.77■□□□□ 0.76
HIF3A-203ENST00000291300 CTDSPL2Q05D32 466 aa19.77■□□□□ 0.76
HIF3A-203ENST00000291300 CYB5R4Q7L1T6 521 aa19.77■□□□□ 0.76
HIF3A-203ENST00000291300 ANKIB1Q9P2G1 1089 aa19.77■□□□□ 0.76
HIF3A-203ENST00000291300 NEDD4P46934 1319 aa19.77■□□□□ 0.76
HIF3A-203ENST00000291300 ST5P78524 1137 aa19.76■□□□□ 0.75
HIF3A-203ENST00000291300 CHAF1AQ13111 956 aaPredicted RBP19.76■□□□□ 0.75
HIF3A-203ENST00000291300 CDC37L1Q7L3B6 337 aa19.76■□□□□ 0.75
HIF3A-203ENST00000291300 RAB11FIP4Q86YS3 637 aa19.76■□□□□ 0.75
HIF3A-203ENST00000291300 RPGRQ92834 1020 aaKnown RBP19.76■□□□□ 0.75
HIF3A-203ENST00000291300 DDX11Q96FC9 970 aa19.76■□□□□ 0.75
HIF3A-203ENST00000291300 BRPF3Q9ULD4 1205 aa19.76■□□□□ 0.75
HIF3A-203ENST00000291300 NAP1L2Q9ULW6 460 aaPredicted RBP19.76■□□□□ 0.75
HIF3A-203ENST00000291300 SLC4A4Q9Y6R1 1079 aa19.76■□□□□ 0.75
HIF3A-203ENST00000291300 PDIA3P30101 505 aaKnown RBP19.76■□□□□ 0.75
HIF3A-203ENST00000291300 DYNLL1P63167 89 aaKnown RBP19.76■□□□□ 0.75
HIF3A-203ENST00000291300 GPSM2P81274 684 aa19.76■□□□□ 0.75
HIF3A-203ENST00000291300 LARP1BQ659C4 914 aaKnown RBP19.76■□□□□ 0.75
HIF3A-203ENST00000291300 NCOA7Q8NI08 942 aa19.76■□□□□ 0.75
HIF3A-203ENST00000291300 CNPY2Q9Y2B0 182 aa19.76■□□□□ 0.75
HIF3A-203ENST00000291300 ALX1Q15699 326 aa19.75■□□□□ 0.75
HIF3A-203ENST00000291300 KLHL40Q2TBA0 621 aa19.75■□□□□ 0.75
HIF3A-203ENST00000291300 SKOR2Q2VWA4 1001 aaPredicted RBP19.75■□□□□ 0.75
HIF3A-203ENST00000291300 POTEAQ6S8J7 498 aa19.75■□□□□ 0.75
HIF3A-203ENST00000291300 SDR42E1Q8WUS8 393 aa19.75■□□□□ 0.75
HIF3A-203ENST00000291300 SENP2Q9HC62 589 aa19.75■□□□□ 0.75
HIF3A-203ENST00000291300 PNPLA7Q6ZV29 1317 aa19.75■□□□□ 0.75
HIF3A-203ENST00000291300 ANKRD31Q8N7Z5 1873 aa19.75■□□□□ 0.75
HIF3A-203ENST00000291300 B4E1Z4 1266 aa19.75■□□□□ 0.75
HIF3A-203ENST00000291300 PRDX5P30044 214 aa19.75■□□□□ 0.75
HIF3A-203ENST00000291300 FERMT3Q86UX7 667 aa19.75■□□□□ 0.75
HIF3A-203ENST00000291300 STK11IPQ8N1F8 1099 aa19.75■□□□□ 0.75
HIF3A-203ENST00000291300 RIOK1Q9BRS2 568 aaKnown RBP19.75■□□□□ 0.75
HIF3A-203ENST00000291300 GADD45BO75293 160 aaPredicted RBP19.74■□□□□ 0.75
HIF3A-203ENST00000291300 NCLP19338 710 aaKnown RBP19.74■□□□□ 0.75
HIF3A-203ENST00000291300 PTMSP20962 102 aa19.74■□□□□ 0.75
HIF3A-203ENST00000291300 MCM5P33992 734 aa19.74■□□□□ 0.75
HIF3A-203ENST00000291300 NSUN7Q8NE18 718 aaKnown RBP19.74■□□□□ 0.75
HIF3A-203ENST00000291300 NAPBQ9H115 298 aa19.74■□□□□ 0.75
HIF3A-203ENST00000291300 RBM27Q9P2N5 1060 aaKnown RBP19.74■□□□□ 0.75
HIF3A-203ENST00000291300 TNS1Q9HBL0 1735 aaKnown RBP19.74■□□□□ 0.75
HIF3A-203ENST00000291300 FAM173BQ6P4H8 233 aa19.73■□□□□ 0.75
HIF3A-203ENST00000291300 CHD4Q14839 1912 aa19.73■□□□□ 0.75
HIF3A-203ENST00000291300 RALYLQ86SE5 291 aaKnown RBP19.73■□□□□ 0.75
HIF3A-203ENST00000291300 USP48Q86UV5 1035 aa19.73■□□□□ 0.75
HIF3A-203ENST00000291300 NSUN4Q96CB9 384 aaKnown RBP19.73■□□□□ 0.75
HIF3A-203ENST00000291300 HPS5Q9UPZ3 1129 aa19.73■□□□□ 0.75
HIF3A-203ENST00000291300 MAGEB6P1A0A0J9YX57 407 aa19.72■□□□□ 0.75
HIF3A-203ENST00000291300 MECOMQ03112 1051 aa19.72■□□□□ 0.75
HIF3A-203ENST00000291300 GAS2L3Q86XJ1 694 aa19.72■□□□□ 0.75
HIF3A-203ENST00000291300 FBXL16Q8N461 479 aa19.72■□□□□ 0.75
HIF3A-203ENST00000291300 SMARCC2Q8TAQ2 1214 aa19.72■□□□□ 0.75
HIF3A-203ENST00000291300 XDHP47989 1333 aa19.72■□□□□ 0.75
HIF3A-203ENST00000291300 FOSBP53539 338 aa19.72■□□□□ 0.75
HIF3A-203ENST00000291300 EVCP57679 992 aa19.72■□□□□ 0.75
HIF3A-203ENST00000291300 DNM1Q05193 864 aaKnown RBP19.72■□□□□ 0.75
HIF3A-203ENST00000291300 GRIK5Q16478 980 aa19.72■□□□□ 0.75
HIF3A-203ENST00000291300 MSL1Q68DK7 614 aa19.72■□□□□ 0.75
HIF3A-203ENST00000291300 NAA16Q6N069 864 aaPredicted RBP19.72■□□□□ 0.75
HIF3A-203ENST00000291300 CAVIN1Q6NZI2 390 aaKnown RBP19.72■□□□□ 0.75
HIF3A-203ENST00000291300 BAZ2AQ9UIF9 1905 aaKnown RBP19.71■□□□□ 0.75
HIF3A-203ENST00000291300 ZMYM6O95789 1325 aa19.71■□□□□ 0.75
HIF3A-203ENST00000291300 SEMA3EO15041 775 aa19.71■□□□□ 0.75
HIF3A-203ENST00000291300 TDO2P48775 406 aa19.71■□□□□ 0.75
HIF3A-203ENST00000291300 EVX2Q03828 476 aa19.71■□□□□ 0.75
HIF3A-203ENST00000291300 ZNF274Q96GC6 653 aaPredicted RBP19.71■□□□□ 0.75
HIF3A-203ENST00000291300 RBM17Q96I25 401 aaKnown RBP19.71■□□□□ 0.75
HIF3A-203ENST00000291300 KLF18A0A0U1RQI7 1052 aa19.7■□□□□ 0.74
HIF3A-203ENST00000291300 FSD2A1L4K1 749 aa19.7■□□□□ 0.74
HIF3A-203ENST00000291300 PTPDC1A2A3K4 754 aa19.7■□□□□ 0.74
HIF3A-203ENST00000291300 LEMD3Q9Y2U8 911 aa19.7■□□□□ 0.74
HIF3A-203ENST00000291300 TIAM2Q8IVF5 1701 aa19.7■□□□□ 0.74
HIF3A-203ENST00000291300 CYP2D7A0A087X1C5 515 aa19.7■□□□□ 0.74
HIF3A-203ENST00000291300 KLRG2A4D1S0 409 aaPredicted RBP19.7■□□□□ 0.74
HIF3A-203ENST00000291300 TPRNQ4KMQ1 711 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms