RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 RUFY1Q96T51 708 aa12.62□□□□□ -0.39
ACTC1-201ENST00000290378 ACBD3Q9H3P7 528 aa12.62□□□□□ -0.39
ACTC1-201ENST00000290378 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
ACTC1-201ENST00000290378 CTIFO43310 598 aaKnown RBP12.62□□□□□ -0.39
ACTC1-201ENST00000290378 DHX16O60231 1041 aaKnown RBP12.62□□□□□ -0.39
ACTC1-201ENST00000290378 TDO2P48775 406 aa12.62□□□□□ -0.39
ACTC1-201ENST00000290378 SPECC1Q5M775 1068 aa12.62□□□□□ -0.39
ACTC1-201ENST00000290378 AIDAQ96BJ3 306 aa12.62□□□□□ -0.39
ACTC1-201ENST00000290378 FAM212AQ96EL1 285 aa12.62□□□□□ -0.39
ACTC1-201ENST00000290378 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.62□□□□□ -0.39
ACTC1-201ENST00000290378 CTAGE5O15320 804 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 TAF5LO75529 589 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 MATR3P43243 847 aaKnown RBP eCLIP12.61□□□□□ -0.39
ACTC1-201ENST00000290378 NAP1L1P55209 391 aaKnown RBP12.61□□□□□ -0.39
ACTC1-201ENST00000290378 EPHA10Q5JZY3 1008 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 SMIM5Q71RC9 77 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 SYNE4Q8N205 404 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 LRRN4CLQ8ND94 238 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 GIMAP7Q8NHV1 300 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 ZBTB1Q9Y2K1 713 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 RGS12O14924 1447 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 ADKP55263 362 aaKnown RBP12.61□□□□□ -0.39
ACTC1-201ENST00000290378 RBM6P78332 1123 aaKnown RBP12.61□□□□□ -0.39
ACTC1-201ENST00000290378 LRRC24Q50LG9 513 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 ICE2Q659A1 982 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 CCDC150Q8NCX0 1101 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 NUP133Q8WUM0 1156 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 SEC62Q99442 399 aaKnown RBP12.61□□□□□ -0.39
ACTC1-201ENST00000290378 AKAP2Q9Y2D5 859 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 CEP170BQ9Y4F5 1589 aaPredicted RBP12.61□□□□□ -0.39
ACTC1-201ENST00000290378 CRB1P82279 1406 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 RXRAP19793 462 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 CPLX2Q6PUV4 134 aaKnown RBP12.61□□□□□ -0.39
ACTC1-201ENST00000290378 MRPS27Q92552 414 aaKnown RBP12.61□□□□□ -0.39
ACTC1-201ENST00000290378 USP28Q96RU2 1077 aa12.61□□□□□ -0.39
ACTC1-201ENST00000290378 PUS3Q9BZE2 481 aaKnown RBP12.61□□□□□ -0.39
ACTC1-201ENST00000290378 SLC27A2O14975 620 aa12.6□□□□□ -0.39
ACTC1-201ENST00000290378 STX17P56962 302 aa12.6□□□□□ -0.39
ACTC1-201ENST00000290378 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.6□□□□□ -0.39
ACTC1-201ENST00000290378 SMARCC1Q92922 1105 aaPredicted RBP12.6□□□□□ -0.39
ACTC1-201ENST00000290378 PPP1R13BQ96KQ4 1090 aa12.6□□□□□ -0.39
ACTC1-201ENST00000290378 PIGBQ92521 554 aa12.6□□□□□ -0.39
ACTC1-201ENST00000290378 TNNI3KQ59H18 835 aa12.6□□□□□ -0.39
ACTC1-201ENST00000290378 GPIHBP1Q8IV16 184 aa12.6□□□□□ -0.39
ACTC1-201ENST00000290378 CARD10Q9BWT7 1032 aa12.6□□□□□ -0.39
ACTC1-201ENST00000290378 HOOK1Q9UJC3 728 aaKnown RBP12.6□□□□□ -0.39
ACTC1-201ENST00000290378 FPGT-TNNI3KV9GXZ4 949 aa12.6□□□□□ -0.39
ACTC1-201ENST00000290378 EPB41L2O43491 1005 aaKnown RBP12.6□□□□□ -0.39
ACTC1-201ENST00000290378 ATP2C2O75185 946 aa12.6□□□□□ -0.39
ACTC1-201ENST00000290378 IGKV5-2P06315 115 aa12.6□□□□□ -0.39
ACTC1-201ENST00000290378 CRACR2AQ9BSW2 395 aa12.6□□□□□ -0.39
ACTC1-201ENST00000290378 LSG1Q9H089 658 aaKnown RBP12.6□□□□□ -0.39
ACTC1-201ENST00000290378 PDE11AQ9HCR9 933 aa12.6□□□□□ -0.39
ACTC1-201ENST00000290378 ZNF652Q9Y2D9 606 aa12.6□□□□□ -0.39
ACTC1-201ENST00000290378 PTPDC1A2A3K4 754 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 CBFA2T2O43439 604 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 KIF5CO60282 957 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 CYP2C19P33261 490 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 IL15P40933 162 aaPredicted RBP12.59□□□□□ -0.39
ACTC1-201ENST00000290378 ETF1P62495 437 aaKnown RBP12.59□□□□□ -0.39
ACTC1-201ENST00000290378 FANCCQ00597 558 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 TEX2Q8IWB9 1127 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 PGBD1Q96JS3 809 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 ANKIB1Q9P2G1 1089 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 LCMT1Q9UIC8 334 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 COL3A1P02461 1466 aaPredicted RBP12.59□□□□□ -0.39
ACTC1-201ENST00000290378 ERICH2A1L162 156 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 ITGA6P23229 1130 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 CNNM3Q8NE01 707 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 TDRD7Q8NHU6 1098 aaKnown RBP12.59□□□□□ -0.39
ACTC1-201ENST00000290378 CAPZA3Q96KX2 299 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 WDHD1O75717 1129 aaPredicted RBP12.59□□□□□ -0.39
ACTC1-201ENST00000290378 SF3A3Q12874 501 aaKnown RBP eCLIP12.59□□□□□ -0.39
ACTC1-201ENST00000290378 DPCR1Q3MIW9 517 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 ZNF569Q5MCW4 686 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 NBPF5PQ86XG9 351 aaPredicted RBP12.59□□□□□ -0.39
ACTC1-201ENST00000290378 PAG1Q9NWQ8 432 aa12.59□□□□□ -0.39
ACTC1-201ENST00000290378 MTX1Q13505 466 aa12.58□□□□□ -0.4
ACTC1-201ENST00000290378 SLFNL1Q499Z3 407 aa12.58□□□□□ -0.4
ACTC1-201ENST00000290378 RNF187Q5TA31 235 aaPredicted RBP12.58□□□□□ -0.4
ACTC1-201ENST00000290378 ORC3Q9UBD5 711 aaPredicted RBP12.58□□□□□ -0.4
ACTC1-201ENST00000290378 NEURL4Q96JN8 1562 aa12.58□□□□□ -0.4
ACTC1-201ENST00000290378 GNPATO15228 680 aa12.58□□□□□ -0.4
ACTC1-201ENST00000290378 IPO7O95373 1038 aaKnown RBP12.58□□□□□ -0.4
ACTC1-201ENST00000290378 ATP1A3P13637 1013 aa12.58□□□□□ -0.4
ACTC1-201ENST00000290378 CTR9Q6PD62 1173 aa12.58□□□□□ -0.4
ACTC1-201ENST00000290378 ANKRD20A12PQ8NF67 263 aa12.58□□□□□ -0.4
ACTC1-201ENST00000290378 LIG3P49916 1009 aa12.58□□□□□ -0.4
ACTC1-201ENST00000290378 SLC9C2Q5TAH2 1124 aa12.58□□□□□ -0.4
ACTC1-201ENST00000290378 ERVV-2B6SEH9 535 aa12.57□□□□□ -0.4
ACTC1-201ENST00000290378 EYA2O00167 538 aa12.57□□□□□ -0.4
ACTC1-201ENST00000290378 SYKP43405 635 aa12.57□□□□□ -0.4
ACTC1-201ENST00000290378 GOLGA1Q92805 767 aa12.57□□□□□ -0.4
ACTC1-201ENST00000290378 KDRP35968 1356 aa12.57□□□□□ -0.4
ACTC1-201ENST00000290378 A0A0D9SFI3 127 aa12.57□□□□□ -0.4
ACTC1-201ENST00000290378 SNAP23O00161 211 aa12.57□□□□□ -0.4
ACTC1-201ENST00000290378 RFC4P35249 363 aa12.57□□□□□ -0.4
ACTC1-201ENST00000290378 IMMTQ16891 758 aaKnown RBP12.57□□□□□ -0.4
ACTC1-201ENST00000290378 TTC19Q6DKK2 380 aaPredicted RBP12.57□□□□□ -0.4
ACTC1-201ENST00000290378 TRMT44Q8IYL2 757 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms