RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 IL17RAQ96F46 866 aa10.12□□□□□ -0.79
PTPDC1-201ENST00000288976 SCN9AQ15858 1988 aa10.12□□□□□ -0.79
PTPDC1-201ENST00000288976 NAV1Q8NEY1 1877 aa10.11□□□□□ -0.79
PTPDC1-201ENST00000288976 WTIPA6NIX2 430 aaPredicted RBP10.11□□□□□ -0.79
PTPDC1-201ENST00000288976 PPIP5K2O43314 1243 aa10.11□□□□□ -0.79
PTPDC1-201ENST00000288976 CDK5RAP2Q96SN8 1893 aa10.11□□□□□ -0.79
PTPDC1-201ENST00000288976 NFKBIEO00221 500 aa10.11□□□□□ -0.79
PTPDC1-201ENST00000288976 NMIQ13287 307 aaPredicted RBP10.11□□□□□ -0.79
PTPDC1-201ENST00000288976 MCMDC2Q4G0Z9 681 aa10.11□□□□□ -0.79
PTPDC1-201ENST00000288976 ANTXR1Q9H6X2 564 aa10.11□□□□□ -0.79
PTPDC1-201ENST00000288976 BCS1LQ9Y276 419 aa10.11□□□□□ -0.79
PTPDC1-201ENST00000288976 ZC3H4Q9UPT8 1303 aaKnown RBP10.11□□□□□ -0.79
PTPDC1-201ENST00000288976 HDLBPQ00341 1268 aaKnown RBP10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 AOC3Q16853 763 aa10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 PAXIP1Q6ZW49 1069 aaPredicted RBP10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 CCDC171Q6TFL3 1326 aa10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 USP17L3A6NCW0 530 aa10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 USP17L4A6NCW7 530 aa10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 MARCH6O60337 910 aa10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 PDE6AP16499 860 aa10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 GNAT2P19087 354 aa10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 PI16Q6UXB8 463 aa10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 NOL8Q76FK4 1167 aaKnown RBP10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 USP17L1Q7RTZ2 530 aa10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 NIM1KQ8IY84 436 aa10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 FAM163AQ96GL9 167 aaPredicted RBP10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 GPR101Q96P66 508 aaPredicted RBP10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 ZNRF3Q9ULT6 936 aa10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 MYH2Q9UKX2 1941 aa10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 LDHBP07195 334 aaKnown RBP10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 NSUN4Q96CB9 384 aaKnown RBP10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 CTDP1Q9Y5B0 961 aaPredicted RBP10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 DSCC1Q9BVC3 393 aa10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 TRIM34Q9BYJ4 488 aa10.1□□□□□ -0.79
PTPDC1-201ENST00000288976 GAKO14976 1311 aa10.09□□□□□ -0.79
PTPDC1-201ENST00000288976 GOLGA6L22H0YM25 854 aa10.09□□□□□ -0.79
PTPDC1-201ENST00000288976 RIMBP2O15034 1052 aa10.09□□□□□ -0.79
PTPDC1-201ENST00000288976 LRP2BPQ9P2M1 347 aa10.09□□□□□ -0.79
PTPDC1-201ENST00000288976 COL2A1P02458 1487 aaPredicted RBP10.09□□□□□ -0.79
PTPDC1-201ENST00000288976 LDHCP07864 332 aa10.09□□□□□ -0.79
PTPDC1-201ENST00000288976 DACT2Q5SW24 774 aa10.09□□□□□ -0.79
PTPDC1-201ENST00000288976 LARGE2Q8N3Y3 721 aa10.09□□□□□ -0.79
PTPDC1-201ENST00000288976 RASSF8Q8NHQ8 419 aa10.09□□□□□ -0.79
PTPDC1-201ENST00000288976 VIL1P09327 827 aaKnown RBP10.09□□□□□ -0.79
PTPDC1-201ENST00000288976 RPS12P25398 132 aaKnown RBP10.09□□□□□ -0.79
PTPDC1-201ENST00000288976 SLC9C2Q5TAH2 1124 aa10.09□□□□□ -0.79
PTPDC1-201ENST00000288976 EDC3Q96F86 508 aaKnown RBP10.09□□□□□ -0.79
PTPDC1-201ENST00000288976 MTMR7Q9Y216 660 aa10.09□□□□□ -0.79
PTPDC1-201ENST00000288976 MROH7-TTC4A0A0A0MT08 1334 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 ZNF532Q9HCE3 1301 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 A0A0D9SFI3 127 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 AGBL3Q8NEM8 1001 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 CNKSR2Q8WXI2 1034 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 LSG1Q9H089 658 aaKnown RBP10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 DHX16O60231 1041 aaKnown RBP10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 IDH1O75874 414 aaKnown RBP10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 PTMAP06454 111 aaKnown RBP10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 LMNB1P20700 586 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 RBM25P49756 843 aaKnown RBP10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 MECOMQ03112 1051 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 MAGEB6Q8N7X4 407 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 NDUFB9Q9Y6M9 179 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 ADAMTSL1Q8N6G6 1762 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 FZD9O00144 591 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 GRIN3BO60391 1043 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 MFSD14BQ5SR56 506 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 HHIPL2Q6UWX4 724 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 CWC27Q6UX04 472 aaKnown RBP10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 KCNB2Q92953 911 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 ZNF277Q9NRM2 450 aaPredicted RBP10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 RAI14Q9P0K7 980 aa10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 ZNF219Q9P2Y4 722 aaPredicted RBP10.08□□□□□ -0.8
PTPDC1-201ENST00000288976 M0R2C6 588 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 PPP4CP60510 307 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 BECN1Q14457 450 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 TNIP1Q15025 636 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 NAA16Q6N069 864 aaPredicted RBP10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 KRI1Q8N9T8 703 aaKnown RBP10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 JDP2Q8WYK2 163 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 YDJCA8MPS7 323 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 MCCP23508 829 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 ANAPC15P60006 121 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 CHAF1AQ13111 956 aaPredicted RBP10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 TTLL5Q6EMB2 1281 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 GIMAP6Q6P9H5 292 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 RSBN1LQ6PCB5 846 aaPredicted RBP10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 DZIP1Q86YF9 867 aaKnown RBP10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 FAM227BQ96M60 508 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 USP26Q9BXU7 913 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 PLCG2P16885 1265 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 NT5C2P49902 561 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 GTF2IP78347 998 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 ALX1Q15699 326 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 DOK7Q18PE1 504 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 DBNDD1Q9H9R9 158 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 SERPINA10Q9UK55 444 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 MTMR14Q8NCE2 650 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 TBC1D32Q96NH3 1257 aa10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 U3KPZ7 1027 aaPredicted RBP10.07□□□□□ -0.8
PTPDC1-201ENST00000288976 WDR90Q96KV7 1748 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms