RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 GGA3Q9NZ52 723 aa24.36■■□□□ 1.49
TIMP4-201ENST00000287814 ANGEL2Q5VTE6 544 aaKnown RBP24.35■■□□□ 1.49
TIMP4-201ENST00000287814 SERPINA10Q9UK55 444 aa24.35■■□□□ 1.49
TIMP4-201ENST00000287814 SCAF8Q9UPN6 1271 aaKnown RBP24.35■■□□□ 1.49
TIMP4-201ENST00000287814 TRAF5O00463 557 aa24.34■■□□□ 1.49
TIMP4-201ENST00000287814 CRKP46108 304 aa24.34■■□□□ 1.49
TIMP4-201ENST00000287814 ABCF2Q9UG63 623 aa24.34■■□□□ 1.49
TIMP4-201ENST00000287814 PASKQ96RG2 1323 aa24.34■■□□□ 1.49
TIMP4-201ENST00000287814 SPDYE2BA6NHP3 402 aa24.34■■□□□ 1.49
TIMP4-201ENST00000287814 LDHBP07195 334 aaKnown RBP24.34■■□□□ 1.49
TIMP4-201ENST00000287814 SPDYE6P0CI01 402 aa24.34■■□□□ 1.49
TIMP4-201ENST00000287814 RBM5P52756 815 aaKnown RBP eCLIP24.34■■□□□ 1.49
TIMP4-201ENST00000287814 NDUFB9Q9Y6M9 179 aa24.34■■□□□ 1.49
TIMP4-201ENST00000287814 ZAP70P43403 619 aa24.33■■□□□ 1.49
TIMP4-201ENST00000287814 USP48Q86UV5 1035 aa24.33■■□□□ 1.49
TIMP4-201ENST00000287814 CYP2E1P05181 493 aaPredicted RBP24.32■■□□□ 1.48
TIMP4-201ENST00000287814 HDLBPQ00341 1268 aaKnown RBP24.32■■□□□ 1.48
TIMP4-201ENST00000287814 DIXDC1Q155Q3 683 aa24.32■■□□□ 1.48
TIMP4-201ENST00000287814 CDC37L1Q7L3B6 337 aa24.32■■□□□ 1.48
TIMP4-201ENST00000287814 DCPSQ96C86 337 aaKnown RBP24.32■■□□□ 1.48
TIMP4-201ENST00000287814 MRIQ9BWK5 157 aa24.32■■□□□ 1.48
TIMP4-201ENST00000287814 RWDD1Q9H446 243 aaPredicted RBP24.32■■□□□ 1.48
TIMP4-201ENST00000287814 AKAP11Q9UKA4 1901 aa24.32■■□□□ 1.48
TIMP4-201ENST00000287814 ADM5C9JUS6 153 aa24.31■■□□□ 1.48
TIMP4-201ENST00000287814 KRT26Q7Z3Y9 468 aa24.31■■□□□ 1.48
TIMP4-201ENST00000287814 ZGPATQ8N5A5 531 aaKnown RBP24.31■■□□□ 1.48
TIMP4-201ENST00000287814 ZNF384Q8TF68 577 aa24.31■■□□□ 1.48
TIMP4-201ENST00000287814 HSPA6P17066 643 aa24.3■■□□□ 1.48
TIMP4-201ENST00000287814 TEKT1Q969V4 418 aa24.3■■□□□ 1.48
TIMP4-201ENST00000287814 GCC1Q96CN9 775 aa24.3■■□□□ 1.48
TIMP4-201ENST00000287814 MAST3O60307 1309 aa24.3■■□□□ 1.48
TIMP4-201ENST00000287814 POLR2AP24928 1970 aaKnown RBP24.3■■□□□ 1.48
TIMP4-201ENST00000287814 CLRN2A0PK11 232 aa24.29■■□□□ 1.48
TIMP4-201ENST00000287814 ANKRD45Q5TZF3 282 aa24.29■■□□□ 1.48
TIMP4-201ENST00000287814 APOBEC3HQ6NTF7 200 aaKnown RBP24.29■■□□□ 1.48
TIMP4-201ENST00000287814 HHIPL2Q6UWX4 724 aa24.29■■□□□ 1.48
TIMP4-201ENST00000287814 ZDHHC15Q96MV8 337 aa24.29■■□□□ 1.48
TIMP4-201ENST00000287814 TDRD3Q9H7E2 651 aaKnown RBP24.29■■□□□ 1.48
TIMP4-201ENST00000287814 PIH1D3Q9NQM4 214 aaKnown RBP24.29■■□□□ 1.48
TIMP4-201ENST00000287814 ERICH6Q7L0X2 663 aa24.28■■□□□ 1.48
TIMP4-201ENST00000287814 SMC5Q8IY18 1101 aa24.28■■□□□ 1.48
TIMP4-201ENST00000287814 OTUD7AQ8TE49 926 aaPredicted RBP24.28■■□□□ 1.48
TIMP4-201ENST00000287814 ANTXR1Q9H6X2 564 aa24.28■■□□□ 1.48
TIMP4-201ENST00000287814 PITPNM2Q9BZ72 1349 aa24.28■■□□□ 1.48
TIMP4-201ENST00000287814 APLP1P51693 650 aa24.27■■□□□ 1.48
TIMP4-201ENST00000287814 HTRA3P83110 453 aa24.27■■□□□ 1.48
TIMP4-201ENST00000287814 MECOMQ03112 1051 aa24.27■■□□□ 1.48
TIMP4-201ENST00000287814 SPTY2D1Q68D10 685 aaPredicted RBP24.27■■□□□ 1.48
TIMP4-201ENST00000287814 SULF1Q8IWU6 871 aa24.27■■□□□ 1.48
TIMP4-201ENST00000287814 DAGLAQ9Y4D2 1042 aa24.27■■□□□ 1.48
TIMP4-201ENST00000287814 ZNF70Q9UC06 446 aaPredicted RBP24.27■■□□□ 1.48
TIMP4-201ENST00000287814 ATP5JP18859 108 aa24.26■■□□□ 1.47
TIMP4-201ENST00000287814 CST9Q5W186 159 aa24.26■■□□□ 1.47
TIMP4-201ENST00000287814 TSHZ3Q63HK5 1081 aa24.26■■□□□ 1.47
TIMP4-201ENST00000287814 DZIP1Q86YF9 867 aaKnown RBP24.26■■□□□ 1.47
TIMP4-201ENST00000287814 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.26■■□□□ 1.47
TIMP4-201ENST00000287814 NSUN4Q96CB9 384 aaKnown RBP24.26■■□□□ 1.47
TIMP4-201ENST00000287814 BOLA2Q9H3K6 86 aa24.26■■□□□ 1.47
TIMP4-201ENST00000287814 RAI14Q9P0K7 980 aa24.26■■□□□ 1.47
TIMP4-201ENST00000287814 LRP2BPQ9P2M1 347 aa24.26■■□□□ 1.47
TIMP4-201ENST00000287814 SPDYE2Q495Y8 402 aa24.25■■□□□ 1.47
TIMP4-201ENST00000287814 PRAMEF18Q5VWM3 479 aa24.25■■□□□ 1.47
TIMP4-201ENST00000287814 MYO1BO43795 1136 aa24.24■■□□□ 1.47
TIMP4-201ENST00000287814 CENPBP07199 599 aaPredicted RBP24.24■■□□□ 1.47
TIMP4-201ENST00000287814 B4GALNT3Q6L9W6 998 aa24.24■■□□□ 1.47
TIMP4-201ENST00000287814 EDC3Q96F86 508 aaKnown RBP24.24■■□□□ 1.47
TIMP4-201ENST00000287814 FAM163AQ96GL9 167 aaPredicted RBP24.24■■□□□ 1.47
TIMP4-201ENST00000287814 VEZTQ9HBM0 779 aa24.24■■□□□ 1.47
TIMP4-201ENST00000287814 ECHDC1Q9NTX5 307 aa24.24■■□□□ 1.47
TIMP4-201ENST00000287814 GAKO14976 1311 aa24.23■■□□□ 1.47
TIMP4-201ENST00000287814 CACNB3P54284 484 aa24.23■■□□□ 1.47
TIMP4-201ENST00000287814 DNAJC2Q99543 621 aaKnown RBP24.23■■□□□ 1.47
TIMP4-201ENST00000287814 APOBEC3FQ8IUX4 373 aaKnown RBP24.22■■□□□ 1.47
TIMP4-201ENST00000287814 CDCA5Q96FF9 252 aa24.22■■□□□ 1.47
TIMP4-201ENST00000287814 DEFB129Q9H1M3 183 aa24.22■■□□□ 1.47
TIMP4-201ENST00000287814 ZNF408Q9H9D4 720 aa24.22■■□□□ 1.47
TIMP4-201ENST00000287814 CEP350Q5VT06 3117 aa24.22■■□□□ 1.47
TIMP4-201ENST00000287814 SALL3Q9BXA9 1300 aa24.22■■□□□ 1.47
TIMP4-201ENST00000287814 CELF2O95319 508 aaKnown RBP24.21■■□□□ 1.47
TIMP4-201ENST00000287814 CDC42EP5Q6NZY7 148 aa24.21■■□□□ 1.47
TIMP4-201ENST00000287814 HAUS7Q99871 368 aa24.21■■□□□ 1.47
TIMP4-201ENST00000287814 LNPKQ9C0E8 428 aa24.21■■□□□ 1.47
TIMP4-201ENST00000287814 MROH7-TTC4A0A0A0MT08 1334 aa24.21■■□□□ 1.47
TIMP4-201ENST00000287814 TMEM88BA6NKF7 163 aa24.21■■□□□ 1.47
TIMP4-201ENST00000287814 GOLIM4O00461 696 aa24.21■■□□□ 1.47
TIMP4-201ENST00000287814 TCP10L2B9ZVM9 353 aa24.2■■□□□ 1.46
TIMP4-201ENST00000287814 IDH1O75874 414 aaKnown RBP24.2■■□□□ 1.46
TIMP4-201ENST00000287814 MYO5AQ9Y4I1 1855 aaKnown RBP24.2■■□□□ 1.46
TIMP4-201ENST00000287814 ECM29Q5VYK3 1845 aa24.19■■□□□ 1.46
TIMP4-201ENST00000287814 NUCB1Q02818 461 aa24.19■■□□□ 1.46
TIMP4-201ENST00000287814 RASA3Q14644 834 aa24.19■■□□□ 1.46
TIMP4-201ENST00000287814 ADGRA1Q86SQ6 560 aa24.19■■□□□ 1.46
TIMP4-201ENST00000287814 SLF2Q8IX21 1173 aa24.19■■□□□ 1.46
TIMP4-201ENST00000287814 CREBZFQ9NS37 354 aa24.19■■□□□ 1.46
TIMP4-201ENST00000287814 USP40Q9NVE5 1235 aa24.19■■□□□ 1.46
TIMP4-201ENST00000287814 ZBTB47Q9UFB7 747 aaPredicted RBP24.19■■□□□ 1.46
TIMP4-201ENST00000287814 MYH2Q9UKX2 1941 aa24.19■■□□□ 1.46
TIMP4-201ENST00000287814 GPR75-ASB3A0A0A6YYF3 556 aa24.18■■□□□ 1.46
TIMP4-201ENST00000287814 BTDP43251 543 aa24.18■■□□□ 1.46
TIMP4-201ENST00000287814 GSTO1P78417 241 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms