RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 MFSD14BQ5SR56 506 aa13.66□□□□□ -0.22
NSMCE2-201ENST00000287437 LMBR1LQ6UX01 489 aa13.66□□□□□ -0.22
NSMCE2-201ENST00000287437 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.66□□□□□ -0.22
NSMCE2-201ENST00000287437 BRI3BPQ8WY22 251 aa13.66□□□□□ -0.22
NSMCE2-201ENST00000287437 TEPSINQ96N21 525 aa13.66□□□□□ -0.22
NSMCE2-201ENST00000287437 TMEM106CQ9BVX2 250 aa13.66□□□□□ -0.22
NSMCE2-201ENST00000287437 TTF2Q9UNY4 1162 aaKnown RBP13.66□□□□□ -0.22
NSMCE2-201ENST00000287437 PTCH2Q9Y6C5 1203 aa13.66□□□□□ -0.22
NSMCE2-201ENST00000287437 CCL15-CCL14A0A0B4J2E2 113 aa13.65□□□□□ -0.22
NSMCE2-201ENST00000287437 TCP10L2B9ZVM9 353 aa13.65□□□□□ -0.22
NSMCE2-201ENST00000287437 VGLL4Q14135 290 aa13.65□□□□□ -0.22
NSMCE2-201ENST00000287437 TAF1CQ15572 869 aaPredicted RBP13.65□□□□□ -0.22
NSMCE2-201ENST00000287437 CCL15Q16663 113 aa13.65□□□□□ -0.22
NSMCE2-201ENST00000287437 CCDC27Q2M243 656 aa13.65□□□□□ -0.22
NSMCE2-201ENST00000287437 SLC9C1Q4G0N8 1177 aa13.65□□□□□ -0.22
NSMCE2-201ENST00000287437 TAF7LQ5H9L4 462 aa13.65□□□□□ -0.22
NSMCE2-201ENST00000287437 LDHAL6AQ6ZMR3 332 aa13.65□□□□□ -0.22
NSMCE2-201ENST00000287437 TMEM39BQ9GZU3 492 aa13.65□□□□□ -0.22
NSMCE2-201ENST00000287437 CNNM1Q9NRU3 951 aa13.65□□□□□ -0.22
NSMCE2-201ENST00000287437 SERPINA10Q9UK55 444 aa13.65□□□□□ -0.22
NSMCE2-201ENST00000287437 FAM205AQ6ZU69 1335 aa13.64□□□□□ -0.23
NSMCE2-201ENST00000287437 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
NSMCE2-201ENST00000287437 KIAA0100Q14667 2235 aaKnown RBP13.64□□□□□ -0.23
NSMCE2-201ENST00000287437 MYCP01106 439 aaPredicted RBP13.64□□□□□ -0.23
NSMCE2-201ENST00000287437 GYG1P46976 350 aa13.64□□□□□ -0.23
NSMCE2-201ENST00000287437 CCDC57Q2TAC2 916 aa13.64□□□□□ -0.23
NSMCE2-201ENST00000287437 BEND3Q5T5X7 828 aa13.64□□□□□ -0.23
NSMCE2-201ENST00000287437 DZIP1LQ8IYY4 767 aaKnown RBP13.64□□□□□ -0.23
NSMCE2-201ENST00000287437 FAM43AQ8N2R8 423 aa13.64□□□□□ -0.23
NSMCE2-201ENST00000287437 OTUD5Q96G74 571 aa13.64□□□□□ -0.23
NSMCE2-201ENST00000287437 ZFYVE28Q9HCC9 887 aa13.64□□□□□ -0.23
NSMCE2-201ENST00000287437 GTF2A2P52657 109 aa13.63□□□□□ -0.23
NSMCE2-201ENST00000287437 MAP3K9P80192 1104 aa13.63□□□□□ -0.23
NSMCE2-201ENST00000287437 SLC4A8Q2Y0W8 1093 aa13.63□□□□□ -0.23
NSMCE2-201ENST00000287437 CCDC184Q52MB2 194 aa13.63□□□□□ -0.23
NSMCE2-201ENST00000287437 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.63□□□□□ -0.23
NSMCE2-201ENST00000287437 TDRD7Q8NHU6 1098 aaKnown RBP13.63□□□□□ -0.23
NSMCE2-201ENST00000287437 COLQQ9Y215 455 aaPredicted RBP13.63□□□□□ -0.23
NSMCE2-201ENST00000287437 IL16Q14005 1332 aa13.63□□□□□ -0.23
NSMCE2-201ENST00000287437 VAMP4O75379 141 aa13.62□□□□□ -0.23
NSMCE2-201ENST00000287437 HIBADHP31937 336 aaKnown RBP13.62□□□□□ -0.23
NSMCE2-201ENST00000287437 CRKP46108 304 aa13.62□□□□□ -0.23
NSMCE2-201ENST00000287437 ARHGEF6Q15052 776 aa13.62□□□□□ -0.23
NSMCE2-201ENST00000287437 GRIK5Q16478 980 aa13.62□□□□□ -0.23
NSMCE2-201ENST00000287437 NBPF11Q86T75 865 aa13.62□□□□□ -0.23
NSMCE2-201ENST00000287437 FAM84BQ96KN1 310 aaPredicted RBP13.62□□□□□ -0.23
NSMCE2-201ENST00000287437 ARHGAP39Q9C0H5 1083 aa13.62□□□□□ -0.23
NSMCE2-201ENST00000287437 CSADQ9Y600 493 aa13.62□□□□□ -0.23
NSMCE2-201ENST00000287437 GRM8O00222 908 aa13.61□□□□□ -0.23
NSMCE2-201ENST00000287437 TNNI2P48788 182 aa13.61□□□□□ -0.23
NSMCE2-201ENST00000287437 CACNB3P54284 484 aa13.61□□□□□ -0.23
NSMCE2-201ENST00000287437 UBE4AQ14139 1066 aa13.61□□□□□ -0.23
NSMCE2-201ENST00000287437 SH3TC2Q8TF17 1288 aa13.61□□□□□ -0.23
NSMCE2-201ENST00000287437 PUS3Q9BZE2 481 aaKnown RBP13.61□□□□□ -0.23
NSMCE2-201ENST00000287437 IQSEC3Q9UPP2 1182 aaPredicted RBP13.61□□□□□ -0.23
NSMCE2-201ENST00000287437 ARAP2Q8WZ64 1704 aa13.61□□□□□ -0.23
NSMCE2-201ENST00000287437 SPDYE5A6NIY4 337 aa13.6□□□□□ -0.23
NSMCE2-201ENST00000287437 EXOSC9Q06265 439 aaKnown RBP13.6□□□□□ -0.23
NSMCE2-201ENST00000287437 SNCAIPQ9Y6H5 919 aa13.6□□□□□ -0.23
NSMCE2-201ENST00000287437 ZSWIM8A7E2V4 1837 aa13.6□□□□□ -0.23
NSMCE2-201ENST00000287437 BTBD19C9JJ37 291 aa13.59□□□□□ -0.23
NSMCE2-201ENST00000287437 H0YGN5 161 aa13.59□□□□□ -0.23
NSMCE2-201ENST00000287437 TLR2O60603 784 aa13.59□□□□□ -0.23
NSMCE2-201ENST00000287437 ECM2O94769 699 aaPredicted RBP13.59□□□□□ -0.23
NSMCE2-201ENST00000287437 LACTBP83111 547 aaPredicted RBP13.59□□□□□ -0.23
NSMCE2-201ENST00000287437 CHAF1AQ13111 956 aaPredicted RBP13.59□□□□□ -0.23
NSMCE2-201ENST00000287437 WRNIP1Q96S55 665 aa13.59□□□□□ -0.23
NSMCE2-201ENST00000287437 C9orf78Q9NZ63 289 aaPredicted RBP13.59□□□□□ -0.23
NSMCE2-201ENST00000287437 SALL2Q9Y467 1007 aaPredicted RBP13.59□□□□□ -0.23
NSMCE2-201ENST00000287437 IRF6O14896 467 aa13.58□□□□□ -0.24
NSMCE2-201ENST00000287437 WDHD1O75717 1129 aaPredicted RBP13.58□□□□□ -0.24
NSMCE2-201ENST00000287437 CETPP11597 493 aa13.58□□□□□ -0.24
NSMCE2-201ENST00000287437 KIF22Q14807 665 aa13.58□□□□□ -0.24
NSMCE2-201ENST00000287437 ERO1BQ86YB8 467 aa13.58□□□□□ -0.24
NSMCE2-201ENST00000287437 ZKSCAN4Q969J2 545 aaPredicted RBP13.58□□□□□ -0.24
NSMCE2-201ENST00000287437 SUCLG2Q96I99 432 aa13.58□□□□□ -0.24
NSMCE2-201ENST00000287437 SNAPC2Q13487 334 aa13.57□□□□□ -0.24
NSMCE2-201ENST00000287437 SLC4A10Q6U841 1118 aa13.57□□□□□ -0.24
NSMCE2-201ENST00000287437 VPS37DQ86XT2 251 aa13.57□□□□□ -0.24
NSMCE2-201ENST00000287437 TEKT1Q969V4 418 aa13.57□□□□□ -0.24
NSMCE2-201ENST00000287437 KAZALD1Q96I82 304 aa13.57□□□□□ -0.24
NSMCE2-201ENST00000287437 RIPOR2Q9Y4F9 1068 aa13.57□□□□□ -0.24
NSMCE2-201ENST00000287437 FRAT2O75474 233 aaPredicted RBP13.56□□□□□ -0.24
NSMCE2-201ENST00000287437 ALDH1L1O75891 902 aa13.56□□□□□ -0.24
NSMCE2-201ENST00000287437 FBXO33Q7Z6M2 555 aa13.56□□□□□ -0.24
NSMCE2-201ENST00000287437 ZCCHC17Q9NP64 241 aaKnown RBP13.56□□□□□ -0.24
NSMCE2-201ENST00000287437 TMOD2Q9NZR1 351 aa13.56□□□□□ -0.24
NSMCE2-201ENST00000287437 MROH5Q6ZUA9 1318 aa13.56□□□□□ -0.24
NSMCE2-201ENST00000287437 CACNA1FO60840 1977 aa13.56□□□□□ -0.24
NSMCE2-201ENST00000287437 SZT2Q5T011 3432 aa13.55□□□□□ -0.24
NSMCE2-201ENST00000287437 NBPF7P0C2Y1 421 aaPredicted RBP13.55□□□□□ -0.24
NSMCE2-201ENST00000287437 CTGFP29279 349 aa13.55□□□□□ -0.24
NSMCE2-201ENST00000287437 HDLBPQ00341 1268 aaKnown RBP13.55□□□□□ -0.24
NSMCE2-201ENST00000287437 PPIL2Q13356 520 aa13.55□□□□□ -0.24
NSMCE2-201ENST00000287437 MTFR1Q15390 333 aa13.55□□□□□ -0.24
NSMCE2-201ENST00000287437 LRRC24Q50LG9 513 aa13.55□□□□□ -0.24
NSMCE2-201ENST00000287437 CHRDL2Q6WN34 429 aa13.55□□□□□ -0.24
NSMCE2-201ENST00000287437 WDR63Q8IWG1 891 aa13.55□□□□□ -0.24
NSMCE2-201ENST00000287437 TBC1D22AQ8WUA7 517 aa13.55□□□□□ -0.24
NSMCE2-201ENST00000287437 SHISA4Q96DD7 197 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms