RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 DNAJC2Q99543 621 aaKnown RBP21.29■■□□□ 1
ATG3-201ENST00000283290 SEMA3EO15041 775 aa21.28■■□□□ 1
ATG3-201ENST00000283290 ITGBL1O95965 494 aaPredicted RBP21.28■■□□□ 1
ATG3-201ENST00000283290 WDR66Q8TBY9 1149 aa21.28■■□□□ 1
ATG3-201ENST00000283290 PIH1D3Q9NQM4 214 aaKnown RBP21.28■■□□□ 1
ATG3-201ENST00000283290 MAP4K4O95819 1239 aaPredicted RBP21.27■■□□□ 1
ATG3-201ENST00000283290 CYP2E1P05181 493 aaPredicted RBP21.27■■□□□ 1
ATG3-201ENST00000283290 DIXDC1Q155Q3 683 aa21.27■■□□□ 1
ATG3-201ENST00000283290 ZBTB47Q9UFB7 747 aaPredicted RBP21.27■■□□□ 1
ATG3-201ENST00000283290 PGAP2Q9UHJ9 254 aa21.27■■□□□ 1
ATG3-201ENST00000283290 ECM29Q5VYK3 1845 aa21.27■■□□□ 1
ATG3-201ENST00000283290 RBM5P52756 815 aaKnown RBP eCLIP21.27■□□□□ 0.99
ATG3-201ENST00000283290 NUCB1Q02818 461 aa21.27■□□□□ 0.99
ATG3-201ENST00000283290 NBPF9Q3BBW0 867 aa21.27■□□□□ 0.99
ATG3-201ENST00000283290 DLK2Q6UY11 383 aa21.27■□□□□ 0.99
ATG3-201ENST00000283290 CHD1LQ86WJ1 897 aa21.27■□□□□ 0.99
ATG3-201ENST00000283290 ZC3H15Q8WU90 426 aaKnown RBP21.27■□□□□ 0.99
ATG3-201ENST00000283290 TBC1D22AQ8WUA7 517 aa21.27■□□□□ 0.99
ATG3-201ENST00000283290 HDAC9Q9UKV0 1011 aa21.27■□□□□ 0.99
ATG3-201ENST00000283290 TRPM7Q96QT4 1865 aa21.26■□□□□ 0.99
ATG3-201ENST00000283290 PASKQ96RG2 1323 aa21.26■□□□□ 0.99
ATG3-201ENST00000283290 FMR1Q06787 632 aaKnown RBP eCLIP21.26■□□□□ 0.99
ATG3-201ENST00000283290 GLIS2Q9BZE0 524 aaPredicted RBP21.26■□□□□ 0.99
ATG3-201ENST00000283290 GGA3Q9NZ52 723 aa21.26■□□□□ 0.99
ATG3-201ENST00000283290 DOCK2Q92608 1830 aa21.25■□□□□ 0.99
ATG3-201ENST00000283290 CEP350Q5VT06 3117 aa21.25■□□□□ 0.99
ATG3-201ENST00000283290 LDHBP07195 334 aaKnown RBP21.25■□□□□ 0.99
ATG3-201ENST00000283290 CFAP100Q494V2 611 aa21.25■□□□□ 0.99
ATG3-201ENST00000283290 ZNF384Q8TF68 577 aa21.25■□□□□ 0.99
ATG3-201ENST00000283290 GOLIM4O00461 696 aa21.24■□□□□ 0.99
ATG3-201ENST00000283290 TRAF5O00463 557 aa21.24■□□□□ 0.99
ATG3-201ENST00000283290 CCDC136Q96JN2 1154 aa21.24■□□□□ 0.99
ATG3-201ENST00000283290 ZNF512BQ96KM6 892 aaPredicted RBP21.24■□□□□ 0.99
ATG3-201ENST00000283290 ECHDC1Q9NTX5 307 aa21.24■□□□□ 0.99
ATG3-201ENST00000283290 SALL3Q9BXA9 1300 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 SALL1Q9NSC2 1324 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 WNT10BO00744 389 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 MX1P20591 662 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 PDE4AP27815 886 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 CRKP46108 304 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 HTRA3P83110 453 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 ANGEL2Q5VTE6 544 aaKnown RBP21.23■□□□□ 0.99
ATG3-201ENST00000283290 PRMT6Q96LA8 375 aaPredicted RBP21.23■□□□□ 0.99
ATG3-201ENST00000283290 RAI14Q9P0K7 980 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 CHGBP05060 677 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 ATP5JP18859 108 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 MMP14P50281 582 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 APLP1P51693 650 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 MECOMQ03112 1051 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 SLFNL1Q499Z3 407 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 ZBED3Q96IU2 234 aaPredicted RBP21.23■□□□□ 0.99
ATG3-201ENST00000283290 LRP2BPQ9P2M1 347 aa21.23■□□□□ 0.99
ATG3-201ENST00000283290 PDS5AQ29RF7 1337 aaKnown RBP21.22■□□□□ 0.99
ATG3-201ENST00000283290 MAST2Q6P0Q8 1798 aa21.22■□□□□ 0.99
ATG3-201ENST00000283290 CLRN2A0PK11 232 aa21.22■□□□□ 0.99
ATG3-201ENST00000283290 DLGAP5Q15398 846 aa21.22■□□□□ 0.99
ATG3-201ENST00000283290 ERICH6Q7L0X2 663 aa21.22■□□□□ 0.99
ATG3-201ENST00000283290 DZIP1Q86YF9 867 aaKnown RBP21.22■□□□□ 0.99
ATG3-201ENST00000283290 DCPSQ96C86 337 aaKnown RBP21.22■□□□□ 0.99
ATG3-201ENST00000283290 MYH7P12883 1935 aa21.22■□□□□ 0.99
ATG3-201ENST00000283290 ADM5C9JUS6 153 aa21.21■□□□□ 0.99
ATG3-201ENST00000283290 IDH1O75874 414 aaKnown RBP21.21■□□□□ 0.99
ATG3-201ENST00000283290 CDC37L1Q7L3B6 337 aa21.21■□□□□ 0.99
ATG3-201ENST00000283290 USP48Q86UV5 1035 aa21.21■□□□□ 0.99
ATG3-201ENST00000283290 PI4K2BQ8TCG2 481 aa21.21■□□□□ 0.99
ATG3-201ENST00000283290 ZBTB22O15209 634 aa21.2■□□□□ 0.98
ATG3-201ENST00000283290 CACNB3P54284 484 aa21.2■□□□□ 0.98
ATG3-201ENST00000283290 KRT26Q7Z3Y9 468 aa21.2■□□□□ 0.98
ATG3-201ENST00000283290 MTMR14Q8NCE2 650 aa21.2■□□□□ 0.98
ATG3-201ENST00000283290 HAUS7Q99871 368 aa21.2■□□□□ 0.98
ATG3-201ENST00000283290 TDRD3Q9H7E2 651 aaKnown RBP21.2■□□□□ 0.98
ATG3-201ENST00000283290 PDE1AP54750 535 aa21.19■□□□□ 0.98
ATG3-201ENST00000283290 PLEKHM2Q8IWE5 1019 aa21.19■□□□□ 0.98
ATG3-201ENST00000283290 TEKT1Q969V4 418 aa21.19■□□□□ 0.98
ATG3-201ENST00000283290 GPATCH3Q96I76 525 aa21.19■□□□□ 0.98
ATG3-201ENST00000283290 PAG1Q9NWQ8 432 aa21.19■□□□□ 0.98
ATG3-201ENST00000283290 SERPINA10Q9UK55 444 aa21.19■□□□□ 0.98
ATG3-201ENST00000283290 DAGLAQ9Y4D2 1042 aa21.19■□□□□ 0.98
ATG3-201ENST00000283290 SPDYE2BA6NHP3 402 aa21.19■□□□□ 0.98
ATG3-201ENST00000283290 SPDYE6P0CI01 402 aa21.19■□□□□ 0.98
ATG3-201ENST00000283290 ADGRA1Q86SQ6 560 aa21.19■□□□□ 0.98
ATG3-201ENST00000283290 ZGPATQ8N5A5 531 aaKnown RBP21.19■□□□□ 0.98
ATG3-201ENST00000283290 NSUN4Q96CB9 384 aaKnown RBP21.19■□□□□ 0.98
ATG3-201ENST00000283290 PRAMEF18Q5VWM3 479 aa21.18■□□□□ 0.98
ATG3-201ENST00000283290 SULF1Q8IWU6 871 aa21.18■□□□□ 0.98
ATG3-201ENST00000283290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.18■□□□□ 0.98
ATG3-201ENST00000283290 SUGT1Q9Y2Z0 365 aa21.18■□□□□ 0.98
ATG3-201ENST00000283290 PITPNM2Q9BZ72 1349 aa21.17■□□□□ 0.98
ATG3-201ENST00000283290 SPTY2D1Q68D10 685 aaPredicted RBP21.17■□□□□ 0.98
ATG3-201ENST00000283290 VEZTQ9HBM0 779 aa21.17■□□□□ 0.98
ATG3-201ENST00000283290 MAST3O60307 1309 aa21.16■□□□□ 0.98
ATG3-201ENST00000283290 TTC41PQ6P2S7 1318 aa21.16■□□□□ 0.98
ATG3-201ENST00000283290 AK9Q5TCS8 1911 aa21.16■□□□□ 0.98
ATG3-201ENST00000283290 APOBEC3HQ6NTF7 200 aaKnown RBP21.16■□□□□ 0.98
ATG3-201ENST00000283290 CENPQQ7L2Z9 268 aaPredicted RBP21.16■□□□□ 0.98
ATG3-201ENST00000283290 MAGEB6Q8N7X4 407 aa21.16■□□□□ 0.98
ATG3-201ENST00000283290 ZNF408Q9H9D4 720 aa21.16■□□□□ 0.98
ATG3-201ENST00000283290 PPP4R2Q9NY27 417 aa21.16■□□□□ 0.98
ATG3-201ENST00000283290 CDK5RAP2Q96SN8 1893 aa21.15■□□□□ 0.98
ATG3-201ENST00000283290 TMEM88BA6NKF7 163 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms