RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 CCDC8Q9H0W5 538 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-201ENST00000283254 FAM204AQ9H8W3 233 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 CC2D2AQ9P2K1 1620 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 ZNF518AQ6AHZ1 1483 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 CTAGE9A4FU28 777 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 TRIM14Q14142 442 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 PLCB4Q15147 1175 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 OTUD7BQ6GQQ9 843 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 UBL4BQ8N7F7 174 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 VCXQ9H320 206 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 SAMD15Q9P1V8 674 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 MAGEB6P1A0A0J9YX57 407 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 GJB2P29033 226 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 DCAF15Q66K64 600 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 PUS7Q96PZ0 661 aaKnown RBP4.57□□□□□ -1.68
SCN3A-201ENST00000283254 ARFGAP3Q9NP61 516 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 EIF4G3O43432 1585 aaKnown RBP4.57□□□□□ -1.68
SCN3A-201ENST00000283254 STRN3Q13033 797 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 TRAPPC3LQ5T215 181 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 TTC22Q5TAA0 569 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 UTP14CQ5TAP6 766 aaKnown RBP4.57□□□□□ -1.68
SCN3A-201ENST00000283254 SNRKQ9NRH2 765 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.57□□□□□ -1.68
SCN3A-201ENST00000283254 NSFL1CQ9UNZ2 370 aaKnown RBP4.57□□□□□ -1.68
SCN3A-201ENST00000283254 HOXB7P09629 217 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 KRT10P13645 584 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 PICALMQ13492 652 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 MCTP2Q6DN12 878 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 RAB11FIP4Q86YS3 637 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 RHPN1Q8TCX5 695 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 PAG1Q9NWQ8 432 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 NOS1P29475 1434 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 GOLGA6CA6NDK9 693 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 GOLGA6BA6NDN3 693 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 E7EVH7 732 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 GRM8O00222 908 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 GNPATO15228 680 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 GOLGA6DP0CG33 693 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 EPB41P11171 864 aaKnown RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 ERCC5P28715 1186 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 CUL4BQ13620 913 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 MCMDC2Q4G0Z9 681 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 AKAP4Q5JQC9 854 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 TRMT1LQ7Z2T5 733 aaKnown RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 SMCR8Q8TEV9 937 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 PPP1R9BQ96SB3 815 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 ALG1Q9BT22 464 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 GOLGA6AQ9NYA3 693 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 LUC7L2Q9Y383 392 aaKnown RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 URB2Q14146 1524 aaKnown RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 RNF113AO15541 343 aaKnown RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 GIGYF1O75420 1035 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 TRIM27P14373 513 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 ATF7P17544 494 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 CCT2P78371 535 aaKnown RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 IRX3P78415 501 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 LGSNQ5TDP6 509 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 USHBP1Q8N6Y0 703 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 CPLX3Q8WVH0 158 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 C16orf45Q96MC5 204 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 MIS18AQ9NYP9 233 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 KRT2P35908 639 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 SH2D4BQ5SQS7 431 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 FYB2Q5VWT5 728 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 NIM1KQ8IY84 436 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 PLCD3Q8N3E9 789 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 IPO4Q8TEX9 1081 aaKnown RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 C14orf93Q9H972 538 aaKnown RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 VCX3AQ9NNX9 186 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 LMTK3Q96Q04 1460 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 MAP3K1Q13233 1512 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 HAND2P61296 217 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 PPP1R7Q15435 360 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 TTC16Q8NEE8 873 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 XAGE3Q8WTP9 111 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 RNF34Q969K3 372 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 VCX3BQ9H321 246 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 BCCIPQ9P287 314 aaKnown RBP eCLIP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 FEZ2Q9UHY8 353 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 EIF2AK4Q9P2K8 1649 aaKnown RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 RTL1A6NKG5 1358 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 BIN1O00499 593 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 CIB2O75838 187 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 BAG6P46379 1132 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 CBX1P83916 185 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 GEN1Q17RS7 908 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 KLHL40Q2TBA0 621 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 CCDC129Q6ZRS4 1044 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 PDZD4Q76G19 769 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 DZIP3Q86Y13 1208 aaKnown RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 CCDC65Q8IXS2 484 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 WDR66Q8TBY9 1149 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 THUMPD2Q9BTF0 503 aaKnown RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 CARD10Q9BWT7 1032 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 BCAP29Q9UHQ4 241 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 RPRD2Q5VT52 1461 aaKnown RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 TYW5A2RUC4 315 aaKnown RBP4.56□□□□□ -1.68
SCN3A-201ENST00000283254 SPTLC2O15270 562 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 CETN3O15182 167 aa4.56□□□□□ -1.68
SCN3A-201ENST00000283254 KMT5BQ4FZB7 885 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms