RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 MECOMQ03112 1051 aa12.09□□□□□ -0.47
ERGIC3-201ENST00000279052 TMEM62Q0P6H9 643 aa12.09□□□□□ -0.47
ERGIC3-201ENST00000279052 MYBPC3Q14896 1274 aa12.09□□□□□ -0.47
ERGIC3-201ENST00000279052 USP48Q86UV5 1035 aa12.09□□□□□ -0.47
ERGIC3-201ENST00000279052 TTC30AQ86WT1 665 aa12.09□□□□□ -0.47
ERGIC3-201ENST00000279052 RABL2AQ9UBK7 228 aaPredicted RBP12.09□□□□□ -0.47
ERGIC3-201ENST00000279052 ZNF510Q9Y2H8 683 aa12.09□□□□□ -0.47
ERGIC3-201ENST00000279052 TTC41PQ6P2S7 1318 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 CEP104O60308 925 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 PLCB4Q15147 1175 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 CCDC57Q2TAC2 916 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 SLC4A8Q2Y0W8 1093 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 SOGA3Q5TF21 947 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 OLFML1Q6UWY5 402 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 SMYD1Q8NB12 490 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 TMEM87AQ8NBN3 555 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 SLC35B4Q969S0 331 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 TRAPPC8Q9Y2L5 1435 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 ST18O60284 1047 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 CSB-PGBD3P0DP91 1061 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 HOXA10P31260 410 aaPredicted RBP12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 ARHGAP25P42331 645 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 ABL2P42684 1182 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 LRRFIP1Q32MZ4 808 aaKnown RBP12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 TSC22D3Q99576 134 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 STK24Q9Y6E0 443 aa12.08□□□□□ -0.48
ERGIC3-201ENST00000279052 CREB3O43889 395 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 RPSAP08865 295 aaKnown RBP12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 SPATS2Q86XZ4 545 aaKnown RBP12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 AFAP1L1Q8TED9 768 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 JAKMIP2Q96AA8 810 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 FAM204AQ9H8W3 233 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 PUF60Q9UHX1 559 aaKnown RBP12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 PHLPP2Q6ZVD8 1323 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 GOLGA6L9A6NEM1 432 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 LIN7AO14910 233 aaPredicted RBP12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 RASSF9O75901 435 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 DESP17661 470 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 SYT1P21579 422 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 YY1P25490 414 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 ENOX2Q16206 610 aaKnown RBP12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 CCDC146Q8IYE0 955 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 SYCP3Q8IZU3 236 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 GALNT15Q8N3T1 639 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 HNRNPLLQ8WVV9 542 aaKnown RBP12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 CCDC102AQ96A19 550 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 N6AMT1Q9Y5N5 214 aa12.07□□□□□ -0.48
ERGIC3-201ENST00000279052 SMARCA5O60264 1052 aaPredicted RBP12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 SEPT14Q6ZU15 432 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 TRPC6Q9Y210 931 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 ASXL1Q8IXJ9 1541 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 MADDQ8WXG6 1647 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 CYP27B1O15528 508 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 PPP1R12BO60237 982 aaPredicted RBP12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 SKIDA1Q1XH10 827 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 BMP2KLQ5H9B9 411 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 BZW1Q7L1Q6 419 aaKnown RBP12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 CCDC47Q96A33 483 aaKnown RBP12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 SPAG5Q96R06 1193 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 BRD8Q9H0E9 1235 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 CENPHQ9H3R5 247 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 PPME1Q9Y570 386 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 CHD1O14646 1710 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 PPFIA3O75145 1194 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 MBD4O95243 580 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 GNAT1P11488 350 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 SLMAPQ14BN4 828 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 CCDC144BQ3MJ40 725 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 CCDC40Q4G0X9 1142 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 GIMAP6Q6P9H5 292 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 CCDC144CPQ8IYA2 1237 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 RABGGTAQ92696 567 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 CORO1BQ9BR76 489 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 PNMA2Q9UL42 364 aa12.06□□□□□ -0.48
ERGIC3-201ENST00000279052 MMEP08473 750 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 UBE2HP62256 183 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 GNL2Q13823 731 aaKnown RBP12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 AGBL1Q96MI9 1066 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 CARD6Q9BX69 1037 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 C1orf115Q9H7X2 142 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 UBAP1Q9NZ09 502 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 CTDP1Q9Y5B0 961 aaPredicted RBP12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 PIK3C2GO75747 1445 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 SYNMO15061 1565 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 ZSCAN12O43309 604 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 CUL4BQ13620 913 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 CCDC70Q6NSX1 233 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 DPY19L2Q6NUT2 758 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 MAMSTRQ6ZN01 415 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 B4GALNT4Q76KP1 1039 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 ERMNQ8TAM6 284 aa12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 DUSP9Q99956 384 aaKnown RBP12.05□□□□□ -0.48
ERGIC3-201ENST00000279052 ABCC1P33527 1531 aa12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 ERCC6L2Q5T890 1561 aa12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 MARCH6O60337 910 aa12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 SHOX2O60902 331 aaPredicted RBP12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 N4BP1O75113 896 aaKnown RBP12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 CCZ1BP86790 482 aa12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 CCZ1P86791 482 aaPredicted RBP12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 TPCN1Q9ULQ1 816 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms