RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 TPM4P67936 248 aa10.48□□□□□ -0.73
SEC16A-201ENST00000277537 TBC1D9BQ66K14 1250 aa10.48□□□□□ -0.73
SEC16A-201ENST00000277537 TTC14Q96N46 770 aa10.48□□□□□ -0.73
SEC16A-201ENST00000277537 MCM9Q9NXL9 1143 aa10.48□□□□□ -0.73
SEC16A-201ENST00000277537 ESPNB1AK53 854 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 SCRN1Q12765 414 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 ZSCAN29Q8IWY8 852 aaPredicted RBP10.47□□□□□ -0.73
SEC16A-201ENST00000277537 CCDC34Q96HJ3 373 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 CRNKL1Q9BZJ0 848 aaKnown RBP10.47□□□□□ -0.73
SEC16A-201ENST00000277537 RBSNQ9H1K0 784 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 BRMS1Q9HCU9 246 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 INCENPQ9NQS7 918 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 SPATA31A5Q5VU36 1347 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 UBN2Q6ZU65 1347 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 SPATA31A7Q8IWB4 1347 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.47□□□□□ -0.73
SEC16A-201ENST00000277537 MARCKSP29966 332 aaPredicted RBP10.47□□□□□ -0.73
SEC16A-201ENST00000277537 KRT23Q9C075 422 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 ZSCAN16Q9H4T2 348 aaPredicted RBP10.47□□□□□ -0.73
SEC16A-201ENST00000277537 STX8Q9UNK0 236 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 COL15A1P39059 1388 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 ADD1P35611 737 aaKnown RBP10.47□□□□□ -0.73
SEC16A-201ENST00000277537 ISM2Q6H9L7 571 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 LRP10Q7Z4F1 713 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 CCAR1Q8IX12 1150 aaKnown RBP10.47□□□□□ -0.73
SEC16A-201ENST00000277537 CMTR1Q8N1G2 835 aaKnown RBP10.47□□□□□ -0.73
SEC16A-201ENST00000277537 ESR2Q92731 530 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 CELF1Q92879 486 aaKnown RBP10.47□□□□□ -0.73
SEC16A-201ENST00000277537 ANGEL1Q9UNK9 670 aaKnown RBP10.47□□□□□ -0.73
SEC16A-201ENST00000277537 AFF2P51816 1311 aa10.47□□□□□ -0.73
SEC16A-201ENST00000277537 BIN1O00499 593 aa10.46□□□□□ -0.73
SEC16A-201ENST00000277537 UFL1O94874 794 aa10.46□□□□□ -0.73
SEC16A-201ENST00000277537 ADD2P35612 726 aa10.46□□□□□ -0.73
SEC16A-201ENST00000277537 IFNL3Q8IZI9 196 aa10.46□□□□□ -0.73
SEC16A-201ENST00000277537 DENND2AQ9ULE3 1009 aa10.46□□□□□ -0.73
SEC16A-201ENST00000277537 RGPD2P0DJD1 1756 aa10.46□□□□□ -0.73
SEC16A-201ENST00000277537 NRDCO43847 1150 aa10.46□□□□□ -0.73
SEC16A-201ENST00000277537 CSF1RP07333 972 aa10.46□□□□□ -0.73
SEC16A-201ENST00000277537 TOB2Q14106 344 aaPredicted RBP10.46□□□□□ -0.73
SEC16A-201ENST00000277537 INTS5Q6P9B9 1019 aaKnown RBP10.46□□□□□ -0.73
SEC16A-201ENST00000277537 CATIPQ7Z7H3 387 aa10.46□□□□□ -0.73
SEC16A-201ENST00000277537 ZNF444Q8N0Y2 327 aaPredicted RBP10.46□□□□□ -0.73
SEC16A-201ENST00000277537 LINC00116Q8NCU8 138 aa10.46□□□□□ -0.73
SEC16A-201ENST00000277537 CTCFLQ8NI51 663 aaPredicted RBP10.46□□□□□ -0.73
SEC16A-201ENST00000277537 PKNOX2Q96KN3 472 aa10.46□□□□□ -0.73
SEC16A-201ENST00000277537 ANKRD2Q9GZV1 360 aa10.46□□□□□ -0.73
SEC16A-201ENST00000277537 TRPC5Q9UL62 973 aaPredicted RBP10.46□□□□□ -0.73
SEC16A-201ENST00000277537 CCDC196A0A1B0GTZ2 297 aa10.46□□□□□ -0.74
SEC16A-201ENST00000277537 CAMTA2O94983 1202 aa10.46□□□□□ -0.74
SEC16A-201ENST00000277537 RTN1Q16799 776 aa10.46□□□□□ -0.74
SEC16A-201ENST00000277537 ZNF34Q8IZ26 560 aa10.46□□□□□ -0.74
SEC16A-201ENST00000277537 JMYQ8N9B5 988 aa10.46□□□□□ -0.74
SEC16A-201ENST00000277537 CNNM2Q9H8M5 875 aa10.46□□□□□ -0.74
SEC16A-201ENST00000277537 ZNF609O15014 1411 aa10.45□□□□□ -0.74
SEC16A-201ENST00000277537 hCG_1642624A0A1W2PR95 340 aa10.45□□□□□ -0.74
SEC16A-201ENST00000277537 IFIT1BQ5T764 474 aaKnown RBP10.45□□□□□ -0.74
SEC16A-201ENST00000277537 MSL1Q68DK7 614 aa10.45□□□□□ -0.74
SEC16A-201ENST00000277537 PTF1AQ7RTS3 328 aa10.45□□□□□ -0.74
SEC16A-201ENST00000277537 GPR101Q96P66 508 aaPredicted RBP10.45□□□□□ -0.74
SEC16A-201ENST00000277537 CDHR2Q9BYE9 1310 aa10.45□□□□□ -0.74
SEC16A-201ENST00000277537 LDHBP07195 334 aaKnown RBP10.45□□□□□ -0.74
SEC16A-201ENST00000277537 PDIA3P30101 505 aaKnown RBP10.45□□□□□ -0.74
SEC16A-201ENST00000277537 STOX1Q6ZVD7 989 aa10.45□□□□□ -0.74
SEC16A-201ENST00000277537 ARHGEF1Q92888 912 aaKnown RBP10.45□□□□□ -0.74
SEC16A-201ENST00000277537 PATL2C9JE40 543 aaKnown RBP10.45□□□□□ -0.74
SEC16A-201ENST00000277537 PES1O00541 588 aaKnown RBP10.45□□□□□ -0.74
SEC16A-201ENST00000277537 BAG3O95817 575 aa10.45□□□□□ -0.74
SEC16A-201ENST00000277537 GNAT2P19087 354 aa10.45□□□□□ -0.74
SEC16A-201ENST00000277537 PICALMQ13492 652 aa10.45□□□□□ -0.74
SEC16A-201ENST00000277537 APBA3O96018 575 aa10.44□□□□□ -0.74
SEC16A-201ENST00000277537 HSPA1LP34931 641 aa10.44□□□□□ -0.74
SEC16A-201ENST00000277537 IKQ13123 557 aaPredicted RBP10.44□□□□□ -0.74
SEC16A-201ENST00000277537 UBE3CQ15386 1083 aa10.44□□□□□ -0.74
SEC16A-201ENST00000277537 SPTY2D1Q68D10 685 aaPredicted RBP10.44□□□□□ -0.74
SEC16A-201ENST00000277537 PDILTQ8N807 584 aa10.44□□□□□ -0.74
SEC16A-201ENST00000277537 WASF1Q92558 559 aa10.44□□□□□ -0.74
SEC16A-201ENST00000277537 VAT1LQ9HCJ6 419 aa10.44□□□□□ -0.74
SEC16A-201ENST00000277537 SAP30BPQ9UHR5 308 aaKnown RBP10.44□□□□□ -0.74
SEC16A-201ENST00000277537 DYNLL1P63167 89 aaKnown RBP10.44□□□□□ -0.74
SEC16A-201ENST00000277537 PDE4BQ07343 736 aa10.44□□□□□ -0.74
SEC16A-201ENST00000277537 SF3B2Q13435 895 aaKnown RBP10.44□□□□□ -0.74
SEC16A-201ENST00000277537 LCORLQ8N3X6 602 aa10.44□□□□□ -0.74
SEC16A-201ENST00000277537 GJD4Q96KN9 370 aaPredicted RBP10.44□□□□□ -0.74
SEC16A-201ENST00000277537 CCDC39Q9UFE4 941 aa10.44□□□□□ -0.74
SEC16A-201ENST00000277537 USP17L12C9JPN9 530 aa10.44□□□□□ -0.74
SEC16A-201ENST00000277537 USP17L21D6R901 530 aa10.44□□□□□ -0.74
SEC16A-201ENST00000277537 MPHOSPH10O00566 681 aaKnown RBP10.44□□□□□ -0.74
SEC16A-201ENST00000277537 RPS6KA4O75676 772 aa10.44□□□□□ -0.74
SEC16A-201ENST00000277537 CDK11BP21127 795 aaKnown RBP10.44□□□□□ -0.74
SEC16A-201ENST00000277537 ZNF804AQ7Z570 1209 aa10.44□□□□□ -0.74
SEC16A-201ENST00000277537 TPD52L1Q16890 204 aaPredicted RBP10.43□□□□□ -0.74
SEC16A-201ENST00000277537 AKNAD1Q5T1N1 836 aa10.43□□□□□ -0.74
SEC16A-201ENST00000277537 TTC6Q86TZ1 520 aa10.43□□□□□ -0.74
SEC16A-201ENST00000277537 FTOQ9C0B1 505 aaKnown RBP eCLIP10.43□□□□□ -0.74
SEC16A-201ENST00000277537 ZC3H12CQ9C0D7 883 aaKnown RBP10.43□□□□□ -0.74
SEC16A-201ENST00000277537 GJB4Q9NTQ9 266 aa10.43□□□□□ -0.74
SEC16A-201ENST00000277537 RGPD1P0DJD0 1748 aa10.43□□□□□ -0.74
SEC16A-201ENST00000277537 CYP2D7A0A087X1C5 515 aa10.43□□□□□ -0.74
SEC16A-201ENST00000277537 PFKFB2O60825 505 aa10.43□□□□□ -0.74
SEC16A-201ENST00000277537 VPS72Q15906 364 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms