RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 ZNF354CQ86Y25 554 aa9.77□□□□□ -0.85
SCUBE3-201ENST00000274938 WHAMMP3Q1A5X7 153 aa9.77□□□□□ -0.85
SCUBE3-201ENST00000274938 HEATR3Q7Z4Q2 680 aa9.77□□□□□ -0.85
SCUBE3-201ENST00000274938 KIFAP3Q92845 792 aa9.77□□□□□ -0.85
SCUBE3-201ENST00000274938 IQCDQ96DY2 449 aa9.77□□□□□ -0.85
SCUBE3-201ENST00000274938 ATP8B2P98198 1209 aa9.77□□□□□ -0.85
SCUBE3-201ENST00000274938 SDCCAG8Q86SQ7 713 aaPredicted RBP9.77□□□□□ -0.85
SCUBE3-201ENST00000274938 TACC3Q9Y6A5 838 aa9.77□□□□□ -0.85
SCUBE3-201ENST00000274938 SNRKQ9NRH2 765 aa9.77□□□□□ -0.85
SCUBE3-201ENST00000274938 MBIPQ9NS73 344 aa9.77□□□□□ -0.85
SCUBE3-201ENST00000274938 ARAP1Q96P48 1450 aa9.77□□□□□ -0.85
SCUBE3-201ENST00000274938 RALGAPBQ86X10 1494 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 C8orf34Q49A92 452 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 PHLDB3Q6NSJ2 640 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 ANKLE2Q86XL3 938 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 UBL4BQ8N7F7 174 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 NOX5Q96PH1 765 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 PRDM2Q13029 1718 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 CNGA1P29973 690 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 HSPA1LP34931 641 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 MAK16Q9BXY0 300 aaKnown RBP9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 PTCD1O75127 700 aaKnown RBP9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 LGSNQ5TDP6 509 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 SEPT14Q6ZU15 432 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 TMTC1Q8IUR5 882 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 FAM204AQ9H8W3 233 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 RIOK3O14730 519 aaKnown RBP9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 CETN3O15182 167 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 GNA11P29992 359 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 PLCD1P51178 756 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 IGSF22Q8N9C0 903 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 SMARCC2Q8TAQ2 1214 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 SECISBP2LQ93073 1101 aaKnown RBP9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 SLC4A4Q9Y6R1 1079 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 NCOA1Q15788 1441 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 NBPF6Q5VWK0 638 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 ARHGEF2Q92974 986 aaKnown RBP9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 NBPF4Q96M43 638 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 GBP5Q96PP8 586 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 PTPDC1A2A3K4 754 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 PPFIA3O75145 1194 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 MCM7P33993 719 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 IL15P40933 162 aaPredicted RBP9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 HHATQ5VTY9 493 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 ZNF365Q70YC5 407 aa9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 LEO1Q8WVC0 666 aaPredicted RBP9.76□□□□□ -0.85
SCUBE3-201ENST00000274938 B4DLN1 442 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 ARHGAP6O43182 974 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 ZNF131P52739 623 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 MRPL12P52815 198 aaKnown RBP9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 WDR78Q5VTH9 848 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 CRCPO75575 148 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 STX17P56962 302 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 BRD3Q15059 726 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 RILPL1Q5EBL4 403 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 RRP36Q96EU6 259 aaKnown RBP9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 STX8Q9UNK0 236 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 I3L4J1 428 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 DTHD1Q6ZMT9 781 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 PNMA8AQ86V59 439 aaPredicted RBP9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 CCDC65Q8IXS2 484 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 CLSTN2Q9H4D0 955 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 FAN1Q9Y2M0 1017 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 SLC8A1P32418 973 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 AK2P54819 239 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 LIN9Q5TKA1 542 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 NOC4LQ9BVI4 516 aaKnown RBP9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 SPOPO43791 374 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 RNF40O75150 1001 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 EPB41P11171 864 aaKnown RBP9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 OAS2P29728 719 aaKnown RBP9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 MAIP1Q8WWC4 291 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 MYCBPQ99417 103 aaPredicted RBP9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 TCHPQ9BT92 498 aa9.75□□□□□ -0.85
SCUBE3-201ENST00000274938 LUC7L3O95232 432 aaKnown RBP9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 TNFAIP3P21580 790 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 ZNF75DP51815 510 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 CARD6Q9BX69 1037 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 PARP2Q9UGN5 583 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 PI4KAP2A4QPH2 592 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 CYP7A1P22680 504 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 CCDC152Q4G0S7 254 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 RUFY3Q7L099 469 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 DHX32Q7L7V1 743 aaKnown RBP9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 SYCE1Q8N0S2 351 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 PI4KAP1Q8N8J0 262 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 SH3BP5O60239 455 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 NCBP1Q09161 790 aaKnown RBP9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 NMIQ13287 307 aaPredicted RBP9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 SV2BQ7L1I2 683 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 RNF113AO15541 343 aaKnown RBP9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 ATP6V1AP38606 617 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 UTP14CQ5TAP6 766 aaKnown RBP9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 UBE3BQ7Z3V4 1068 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 STK24Q9Y6E0 443 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 HECW1Q76N89 1606 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 ZNF445P59923 1031 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 TBC1D8BQ0IIM8 1120 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 ELF2Q15723 593 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms