RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 TXLNAP40222 546 aa18.1■□□□□ 0.49
CTDSP1-201ENST00000273062 PIP4K2AP48426 406 aaPredicted RBP18.1■□□□□ 0.49
CTDSP1-201ENST00000273062 DHX58Q96C10 678 aa18.1■□□□□ 0.49
CTDSP1-201ENST00000273062 FAXDC2Q96IV6 333 aa18.1■□□□□ 0.49
CTDSP1-201ENST00000273062 SURF6O75683 361 aaKnown RBP18.1■□□□□ 0.49
CTDSP1-201ENST00000273062 INHBEP58166 350 aa18.1■□□□□ 0.49
CTDSP1-201ENST00000273062 TTC19Q6DKK2 380 aaPredicted RBP18.1■□□□□ 0.49
CTDSP1-201ENST00000273062 CCDC102AQ96A19 550 aa18.1■□□□□ 0.49
CTDSP1-201ENST00000273062 TCEANC2Q96MN5 208 aa18.1■□□□□ 0.49
CTDSP1-201ENST00000273062 COL18A1P39060 1754 aa18.1■□□□□ 0.49
CTDSP1-201ENST00000273062 SIPA1L3O60292 1781 aaPredicted RBP18.09■□□□□ 0.49
CTDSP1-201ENST00000273062 TATP17735 454 aaPredicted RBP18.09■□□□□ 0.49
CTDSP1-201ENST00000273062 DHX8Q14562 1220 aaKnown RBP18.09■□□□□ 0.49
CTDSP1-201ENST00000273062 ANKZF1Q9H8Y5 726 aa18.09■□□□□ 0.49
CTDSP1-201ENST00000273062 SPATA31A3Q5VYP0 1347 aa18.09■□□□□ 0.49
CTDSP1-201ENST00000273062 KCNJ6P48051 423 aa18.09■□□□□ 0.49
CTDSP1-201ENST00000273062 SEMA3FQ13275 785 aa18.09■□□□□ 0.49
CTDSP1-201ENST00000273062 BRINP3Q76B58 766 aa18.09■□□□□ 0.49
CTDSP1-201ENST00000273062 SLC52A2Q9HAB3 445 aa18.09■□□□□ 0.49
CTDSP1-201ENST00000273062 OVOS2A0A0G2JMS6 1433 aa18.09■□□□□ 0.49
CTDSP1-201ENST00000273062 PAX7P23759 505 aa18.08■□□□□ 0.49
CTDSP1-201ENST00000273062 GNG11P61952 73 aa18.08■□□□□ 0.49
CTDSP1-201ENST00000273062 PDIA6Q15084 440 aa18.08■□□□□ 0.49
CTDSP1-201ENST00000273062 NAIF1Q69YI7 327 aaPredicted RBP18.08■□□□□ 0.49
CTDSP1-201ENST00000273062 ZNF790Q6PG37 636 aa18.08■□□□□ 0.49
CTDSP1-201ENST00000273062 FMNL2Q96PY5 1086 aa18.08■□□□□ 0.49
CTDSP1-201ENST00000273062 ABCB6Q9NP58 842 aa18.08■□□□□ 0.49
CTDSP1-201ENST00000273062 CYP27B1O15528 508 aa18.08■□□□□ 0.48
CTDSP1-201ENST00000273062 POLA2Q14181 598 aa18.08■□□□□ 0.48
CTDSP1-201ENST00000273062 GOLGA1Q92805 767 aa18.08■□□□□ 0.48
CTDSP1-201ENST00000273062 TFRCP02786 760 aaKnown RBP18.07■□□□□ 0.48
CTDSP1-201ENST00000273062 TUBB4AP04350 444 aa18.07■□□□□ 0.48
CTDSP1-201ENST00000273062 MYL6BP14649 208 aa18.07■□□□□ 0.48
CTDSP1-201ENST00000273062 NBPF20Q3BBV1 942 aa18.07■□□□□ 0.48
CTDSP1-201ENST00000273062 RABEP2Q9H5N1 569 aa18.07■□□□□ 0.48
CTDSP1-201ENST00000273062 XIRP1Q702N8 1843 aaKnown RBP18.07■□□□□ 0.48
CTDSP1-201ENST00000273062 CRYBG1Q9Y4K1 1723 aa18.07■□□□□ 0.48
CTDSP1-201ENST00000273062 EIF5P55010 431 aaKnown RBP18.07■□□□□ 0.48
CTDSP1-201ENST00000273062 PTH1RQ03431 593 aa18.07■□□□□ 0.48
CTDSP1-201ENST00000273062 PRPF40BQ6NWY9 871 aaKnown RBP18.07■□□□□ 0.48
CTDSP1-201ENST00000273062 HDXQ7Z353 690 aa18.07■□□□□ 0.48
CTDSP1-201ENST00000273062 MIEF2Q96C03 454 aa18.07■□□□□ 0.48
CTDSP1-201ENST00000273062 L1RE1Q9UN81 338 aa18.07■□□□□ 0.48
CTDSP1-201ENST00000273062 SCRN1Q12765 414 aa18.06■□□□□ 0.48
CTDSP1-201ENST00000273062 CEP57L1Q8IYX8 460 aa18.06■□□□□ 0.48
CTDSP1-201ENST00000273062 SH2B1Q9NRF2 756 aaPredicted RBP18.06■□□□□ 0.48
CTDSP1-201ENST00000273062 ADAMTS7Q9UKP4 1686 aa18.06■□□□□ 0.48
CTDSP1-201ENST00000273062 ZNF335Q9H4Z2 1342 aaPredicted RBP18.06■□□□□ 0.48
CTDSP1-201ENST00000273062 BRD3Q15059 726 aa18.06■□□□□ 0.48
CTDSP1-201ENST00000273062 DPCR1Q3MIW9 517 aa18.06■□□□□ 0.48
CTDSP1-201ENST00000273062 KSR2Q6VAB6 950 aa18.06■□□□□ 0.48
CTDSP1-201ENST00000273062 KIFC2Q96AC6 838 aa18.06■□□□□ 0.48
CTDSP1-201ENST00000273062 ZNF496Q96IT1 587 aaPredicted RBP18.06■□□□□ 0.48
CTDSP1-201ENST00000273062 STAP2Q9UGK3 403 aa18.06■□□□□ 0.48
CTDSP1-201ENST00000273062 CALR3Q96L12 384 aaKnown RBP18.05■□□□□ 0.48
CTDSP1-201ENST00000273062 ANO10Q9NW15 660 aa18.05■□□□□ 0.48
CTDSP1-201ENST00000273062 PUF60Q9UHX1 559 aaKnown RBP18.05■□□□□ 0.48
CTDSP1-201ENST00000273062 C5P01031 1676 aa18.05■□□□□ 0.48
CTDSP1-201ENST00000273062 IBSPP21815 317 aaPredicted RBP18.05■□□□□ 0.48
CTDSP1-201ENST00000273062 GBP6Q6ZN66 633 aa18.05■□□□□ 0.48
CTDSP1-201ENST00000273062 CCAR1Q8IX12 1150 aaKnown RBP18.05■□□□□ 0.48
CTDSP1-201ENST00000273062 RHPN1Q8TCX5 695 aa18.05■□□□□ 0.48
CTDSP1-201ENST00000273062 IRX2Q9BZI1 471 aaPredicted RBP18.05■□□□□ 0.48
CTDSP1-201ENST00000273062 CCT5P48643 541 aa18.04■□□□□ 0.48
CTDSP1-201ENST00000273062 CD248Q9HCU0 757 aa18.04■□□□□ 0.48
CTDSP1-201ENST00000273062 C9orf78Q9NZ63 289 aaPredicted RBP18.04■□□□□ 0.48
CTDSP1-201ENST00000273062 PA2G4Q9UQ80 394 aaKnown RBP18.04■□□□□ 0.48
CTDSP1-201ENST00000273062 LRRIQ3A6PVS8 624 aaPredicted RBP18.04■□□□□ 0.48
CTDSP1-201ENST00000273062 NEBLO76041 1014 aa18.04■□□□□ 0.48
CTDSP1-201ENST00000273062 STK3Q13188 491 aa18.04■□□□□ 0.48
CTDSP1-201ENST00000273062 CNKSR2Q8WXI2 1034 aa18.04■□□□□ 0.48
CTDSP1-201ENST00000273062 EHD4Q9H223 541 aa18.04■□□□□ 0.48
CTDSP1-201ENST00000273062 GNL3LQ9NVN8 582 aaKnown RBP18.04■□□□□ 0.48
CTDSP1-201ENST00000273062 FAM169AQ9Y6X4 670 aa18.04■□□□□ 0.48
CTDSP1-201ENST00000273062 C21orf2O43822 256 aa18.03■□□□□ 0.48
CTDSP1-201ENST00000273062 ATP1A3P13637 1013 aa18.03■□□□□ 0.48
CTDSP1-201ENST00000273062 CASP8Q14790 479 aa18.03■□□□□ 0.48
CTDSP1-201ENST00000273062 IFNL2Q8IZJ0 200 aa18.03■□□□□ 0.48
CTDSP1-201ENST00000273062 ZSCAN31Q96LW9 406 aaPredicted RBP18.03■□□□□ 0.48
CTDSP1-201ENST00000273062 MPHOSPH8Q99549 860 aa18.03■□□□□ 0.48
CTDSP1-201ENST00000273062 PPP2R2CQ9Y2T4 447 aa18.03■□□□□ 0.48
CTDSP1-201ENST00000273062 SH3BP1Q9Y3L3 701 aa18.03■□□□□ 0.48
CTDSP1-201ENST00000273062 CYP46A1Q9Y6A2 500 aa18.03■□□□□ 0.48
CTDSP1-201ENST00000273062 ATP2B2Q01814 1243 aa18.03■□□□□ 0.48
CTDSP1-201ENST00000273062 TRDNQ13061 729 aa18.03■□□□□ 0.48
CTDSP1-201ENST00000273062 C11orf91Q3C1V1 193 aa18.03■□□□□ 0.48
CTDSP1-201ENST00000273062 ZSWIM6Q9HCJ5 1215 aa18.03■□□□□ 0.48
CTDSP1-201ENST00000273062 SCN11AQ9UI33 1791 aa18.03■□□□□ 0.48
CTDSP1-201ENST00000273062 JAK2O60674 1132 aa18.02■□□□□ 0.48
CTDSP1-201ENST00000273062 GPTP24298 496 aa18.02■□□□□ 0.48
CTDSP1-201ENST00000273062 GIMAP7Q8NHV1 300 aa18.02■□□□□ 0.48
CTDSP1-201ENST00000273062 FAM71BQ8TC56 605 aa18.02■□□□□ 0.48
CTDSP1-201ENST00000273062 DPF2Q92785 391 aa18.02■□□□□ 0.48
CTDSP1-201ENST00000273062 DDX21Q9NR30 783 aaKnown RBP eCLIP18.02■□□□□ 0.48
CTDSP1-201ENST00000273062 MYO1FO00160 1098 aa18.02■□□□□ 0.48
CTDSP1-201ENST00000273062 RNF40O75150 1001 aa18.02■□□□□ 0.48
CTDSP1-201ENST00000273062 ELF1P32519 619 aa18.02■□□□□ 0.48
CTDSP1-201ENST00000273062 CHMP4BP1P59074 171 aa18.02■□□□□ 0.48
CTDSP1-201ENST00000273062 VSNL1P62760 191 aa18.02■□□□□ 0.48
CTDSP1-201ENST00000273062 ERC1Q8IUD2 1116 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms