RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 SARM1Q6SZW1 724 aa19.49■□□□□ 0.71
SQLE-201ENST00000265896 NFXL1Q6ZNB6 911 aa19.49■□□□□ 0.71
SQLE-201ENST00000265896 NYAP1Q6ZVC0 841 aa19.49■□□□□ 0.71
SQLE-201ENST00000265896 KIF18AQ8NI77 898 aa19.49■□□□□ 0.71
SQLE-201ENST00000265896 CDC27P30260 824 aa19.48■□□□□ 0.71
SQLE-201ENST00000265896 TBC1D10CQ8IV04 446 aa19.48■□□□□ 0.71
SQLE-201ENST00000265896 ZNF274Q96GC6 653 aaPredicted RBP19.48■□□□□ 0.71
SQLE-201ENST00000265896 PPP1R13BQ96KQ4 1090 aa19.48■□□□□ 0.71
SQLE-201ENST00000265896 ALG1Q9BT22 464 aa19.48■□□□□ 0.71
SQLE-201ENST00000265896 RTEL1Q9NZ71 1219 aa19.48■□□□□ 0.71
SQLE-201ENST00000265896 COBLO75128 1261 aa19.48■□□□□ 0.71
SQLE-201ENST00000265896 METTL24Q5JXM2 366 aa19.48■□□□□ 0.71
SQLE-201ENST00000265896 ANO1Q5XXA6 986 aa19.48■□□□□ 0.71
SQLE-201ENST00000265896 PDIA4P13667 645 aaKnown RBP19.47■□□□□ 0.71
SQLE-201ENST00000265896 ATF3P18847 181 aa19.47■□□□□ 0.71
SQLE-201ENST00000265896 GRIN1Q05586 938 aa19.47■□□□□ 0.71
SQLE-201ENST00000265896 TRMT44Q8IYL2 757 aaKnown RBP19.47■□□□□ 0.71
SQLE-201ENST00000265896 hCG_1642624A0A1W2PR95 340 aa19.47■□□□□ 0.71
SQLE-201ENST00000265896 UTP14AQ9BVJ6 771 aaKnown RBP19.47■□□□□ 0.71
SQLE-201ENST00000265896 NEDD4P46934 1319 aa19.47■□□□□ 0.71
SQLE-201ENST00000265896 RBM6P78332 1123 aaKnown RBP19.47■□□□□ 0.71
SQLE-201ENST00000265896 FANCCQ00597 558 aa19.47■□□□□ 0.71
SQLE-201ENST00000265896 VPS37DQ86XT2 251 aa19.47■□□□□ 0.71
SQLE-201ENST00000265896 A0A0U1RQG5 324 aaPredicted RBP19.46■□□□□ 0.71
SQLE-201ENST00000265896 MCAMP43121 646 aa19.46■□□□□ 0.71
SQLE-201ENST00000265896 SYKP43405 635 aa19.46■□□□□ 0.71
SQLE-201ENST00000265896 KIF23Q02241 960 aaPredicted RBP19.46■□□□□ 0.71
SQLE-201ENST00000265896 CTDSPL2Q05D32 466 aa19.46■□□□□ 0.71
SQLE-201ENST00000265896 CGNQ9P2M7 1197 aaKnown RBP19.46■□□□□ 0.71
SQLE-201ENST00000265896 KCNJ14Q9UNX9 436 aa19.46■□□□□ 0.71
SQLE-201ENST00000265896 IQSEC3Q9UPP2 1182 aaPredicted RBP19.46■□□□□ 0.71
SQLE-201ENST00000265896 LDHAL6AQ6ZMR3 332 aa19.46■□□□□ 0.71
SQLE-201ENST00000265896 TRERF1Q96PN7 1200 aa19.46■□□□□ 0.71
SQLE-201ENST00000265896 AGXT2Q9BYV1 514 aa19.46■□□□□ 0.71
SQLE-201ENST00000265896 NBPF3Q9H094 633 aa19.46■□□□□ 0.71
SQLE-201ENST00000265896 OGFRQ9NZT2 677 aa19.46■□□□□ 0.71
SQLE-201ENST00000265896 ZBTB22O15209 634 aa19.45■□□□□ 0.7
SQLE-201ENST00000265896 CDC25BP30305 580 aa19.45■□□□□ 0.7
SQLE-201ENST00000265896 AXDND1Q5T1B0 1012 aaPredicted RBP19.45■□□□□ 0.7
SQLE-201ENST00000265896 MB21D2Q8IYB1 491 aaPredicted RBP19.45■□□□□ 0.7
SQLE-201ENST00000265896 NCOA7Q8NI08 942 aa19.45■□□□□ 0.7
SQLE-201ENST00000265896 GREM2Q9H772 168 aa19.45■□□□□ 0.7
SQLE-201ENST00000265896 SMIM22K7EJ46 135 aa19.45■□□□□ 0.7
SQLE-201ENST00000265896 METAP2P50579 478 aaKnown RBP eCLIP19.45■□□□□ 0.7
SQLE-201ENST00000265896 NCAPHQ15003 741 aa19.45■□□□□ 0.7
SQLE-201ENST00000265896 ZSWIM4Q9H7M6 989 aa19.45■□□□□ 0.7
SQLE-201ENST00000265896 FANCLQ9NW38 375 aa19.45■□□□□ 0.7
SQLE-201ENST00000265896 DDX41Q9UJV9 622 aaKnown RBP19.45■□□□□ 0.7
SQLE-201ENST00000265896 GUCY1A2P33402 732 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 HLFQ16534 295 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 LONRF3Q496Y0 759 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 KRT40Q6A162 431 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 SHC4Q6S5L8 630 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 CNNM1Q9NRU3 951 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 UBASH3AP57075 661 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 SLC26A6Q9BXS9 759 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 PRDM11Q9NQV5 511 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 ZNF446Q9NWS9 450 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 WWC3Q9ULE0 1092 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 ASAP1Q9ULH1 1129 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 URI1O94763 535 aaPredicted RBP19.44■□□□□ 0.7
SQLE-201ENST00000265896 SLU7O95391 586 aaKnown RBP19.44■□□□□ 0.7
SQLE-201ENST00000265896 CASP1P29466 404 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 PDE4BQ07343 736 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 TRDNQ13061 729 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 DNAJC10Q8IXB1 793 aa19.44■□□□□ 0.7
SQLE-201ENST00000265896 PIH1D3Q9NQM4 214 aaKnown RBP19.44■□□□□ 0.7
SQLE-201ENST00000265896 SRCAPQ6ZRS2 3230 aa19.43■□□□□ 0.7
SQLE-201ENST00000265896 FANCGO15287 622 aa19.43■□□□□ 0.7
SQLE-201ENST00000265896 IFIT5Q13325 482 aaKnown RBP19.43■□□□□ 0.7
SQLE-201ENST00000265896 FOXP4Q8IVH2 680 aaPredicted RBP19.43■□□□□ 0.7
SQLE-201ENST00000265896 KCNG4Q8TDN1 519 aa19.43■□□□□ 0.7
SQLE-201ENST00000265896 PHKA1P46020 1223 aa19.42■□□□□ 0.7
SQLE-201ENST00000265896 ADKP55263 362 aaKnown RBP19.42■□□□□ 0.7
SQLE-201ENST00000265896 ARHGAP29Q52LW3 1261 aa19.42■□□□□ 0.7
SQLE-201ENST00000265896 CREBRFQ8IUR6 639 aa19.42■□□□□ 0.7
SQLE-201ENST00000265896 ZCRB1Q8TBF4 217 aaKnown RBP19.42■□□□□ 0.7
SQLE-201ENST00000265896 SEC31AO94979 1220 aaKnown RBP19.42■□□□□ 0.7
SQLE-201ENST00000265896 CAVIN2O95810 425 aa19.42■□□□□ 0.7
SQLE-201ENST00000265896 MAPK8IP2Q13387 824 aaPredicted RBP19.42■□□□□ 0.7
SQLE-201ENST00000265896 DESI2Q9BSY9 194 aa19.42■□□□□ 0.7
SQLE-201ENST00000265896 HSD3B7Q9H2F3 369 aa19.42■□□□□ 0.7
SQLE-201ENST00000265896 NLRP12P59046 1061 aa19.41■□□□□ 0.7
SQLE-201ENST00000265896 C19orf44Q9H6X5 657 aa19.41■□□□□ 0.7
SQLE-201ENST00000265896 FER1L4A9Z1Z3 1794 aa19.41■□□□□ 0.7
SQLE-201ENST00000265896 PRKAB2O43741 272 aa19.41■□□□□ 0.7
SQLE-201ENST00000265896 BTBD18B2RXH4 712 aa19.41■□□□□ 0.7
SQLE-201ENST00000265896 POLR3GO15318 223 aaPredicted RBP19.41■□□□□ 0.7
SQLE-201ENST00000265896 ITGA6P23229 1130 aa19.41■□□□□ 0.7
SQLE-201ENST00000265896 USP49Q70CQ1 688 aa19.41■□□□□ 0.7
SQLE-201ENST00000265896 CPLX3Q8WVH0 158 aa19.41■□□□□ 0.7
SQLE-201ENST00000265896 APPBP2Q92624 585 aa19.41■□□□□ 0.7
SQLE-201ENST00000265896 ZNF532Q9HCE3 1301 aa19.4■□□□□ 0.7
SQLE-201ENST00000265896 RANBP6O60518 1105 aaKnown RBP19.4■□□□□ 0.7
SQLE-201ENST00000265896 CCDC191Q8NCU4 936 aa19.4■□□□□ 0.7
SQLE-201ENST00000265896 ZNF397Q8NF99 534 aaPredicted RBP19.4■□□□□ 0.7
SQLE-201ENST00000265896 NUP133Q8WUM0 1156 aa19.4■□□□□ 0.7
SQLE-201ENST00000265896 POLR3EQ9NVU0 708 aa19.4■□□□□ 0.7
SQLE-201ENST00000265896 TBC1D2BQ9UPU7 963 aa19.4■□□□□ 0.7
SQLE-201ENST00000265896 PCDHA5Q9Y5H7 936 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms